RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 ANKRD31Q8N7Z5 1873 aa12.15□□□□□ -0.46
CDK5RAP3-211ENST00000578996 RALBP1Q15311 655 aa12.15□□□□□ -0.46
CDK5RAP3-211ENST00000578996 CLEC4GQ6UXB4 293 aa12.15□□□□□ -0.46
CDK5RAP3-211ENST00000578996 RRP7AQ9Y3A4 280 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-211ENST00000578996 COL11A2P13942 1736 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-211ENST00000578996 DLG5Q8TDM6 1919 aa12.14□□□□□ -0.47
CDK5RAP3-211ENST00000578996 NFKBIEO00221 500 aa12.14□□□□□ -0.47
CDK5RAP3-211ENST00000578996 MYL6BP14649 208 aa12.14□□□□□ -0.47
CDK5RAP3-211ENST00000578996 GTF2E1P29083 439 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-211ENST00000578996 PRELPP51888 382 aa12.14□□□□□ -0.47
CDK5RAP3-211ENST00000578996 TSPYL4Q9UJ04 414 aa12.14□□□□□ -0.47
CDK5RAP3-211ENST00000578996 CEP350Q5VT06 3117 aa12.13□□□□□ -0.47
CDK5RAP3-211ENST00000578996 LAMB4A4D0S4 1761 aa12.13□□□□□ -0.47
CDK5RAP3-211ENST00000578996 RIPK4P57078 832 aa12.13□□□□□ -0.47
CDK5RAP3-211ENST00000578996 EIF4A1P60842 406 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-211ENST00000578996 HLFQ16534 295 aa12.13□□□□□ -0.47
CDK5RAP3-211ENST00000578996 PRPF40BQ6NWY9 871 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-211ENST00000578996 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
CDK5RAP3-211ENST00000578996 KIF6Q6ZMV9 814 aa12.13□□□□□ -0.47
CDK5RAP3-211ENST00000578996 RBM46Q8TBY0 533 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-211ENST00000578996 CNKSR1Q969H4 720 aa12.13□□□□□ -0.47
CDK5RAP3-211ENST00000578996 MASTLQ96GX5 879 aa12.13□□□□□ -0.47
CDK5RAP3-211ENST00000578996 KDM3BQ7LBC6 1761 aa12.13□□□□□ -0.47
CDK5RAP3-211ENST00000578996 ZC3H4Q9UPT8 1303 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-211ENST00000578996 TIAM2Q8IVF5 1701 aa12.12□□□□□ -0.47
CDK5RAP3-211ENST00000578996 SRGNP10124 158 aa12.12□□□□□ -0.47
CDK5RAP3-211ENST00000578996 APLP1P51693 650 aa12.12□□□□□ -0.47
CDK5RAP3-211ENST00000578996 STYK1Q6J9G0 422 aa12.12□□□□□ -0.47
CDK5RAP3-211ENST00000578996 CCDC146Q8IYE0 955 aa12.12□□□□□ -0.47
CDK5RAP3-211ENST00000578996 SBF1O95248 1867 aa12.12□□□□□ -0.47
CDK5RAP3-211ENST00000578996 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-211ENST00000578996 TNRC6CQ9HCJ0 1690 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-211ENST00000578996 GLTPD2A6NH11 291 aa12.11□□□□□ -0.47
CDK5RAP3-211ENST00000578996 NEUROD2Q15784 382 aa12.11□□□□□ -0.47
CDK5RAP3-211ENST00000578996 ERFEQ4G0M1 354 aa12.11□□□□□ -0.47
CDK5RAP3-211ENST00000578996 TAOK3Q9H2K8 898 aa12.11□□□□□ -0.47
CDK5RAP3-211ENST00000578996 ZBTB3Q9H5J0 574 aa12.11□□□□□ -0.47
CDK5RAP3-211ENST00000578996 CACNA1SQ13698 1873 aa12.1□□□□□ -0.47
CDK5RAP3-211ENST00000578996 NPR1P16066 1061 aa12.1□□□□□ -0.47
CDK5RAP3-211ENST00000578996 EIF2S2P20042 333 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-211ENST00000578996 GPTP24298 496 aa12.1□□□□□ -0.47
CDK5RAP3-211ENST00000578996 LMOD3Q0VAK6 560 aa12.1□□□□□ -0.47
CDK5RAP3-211ENST00000578996 WDR43Q15061 677 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDK5RAP3-211ENST00000578996 SOGA3Q5TF21 947 aa12.1□□□□□ -0.47
CDK5RAP3-211ENST00000578996 DPY19L2Q6NUT2 758 aa12.1□□□□□ -0.47
CDK5RAP3-211ENST00000578996 TTLL7Q6ZT98 887 aa12.1□□□□□ -0.47
CDK5RAP3-211ENST00000578996 MAP3K15Q6ZN16 1313 aa12.1□□□□□ -0.47
CDK5RAP3-211ENST00000578996 TMPOP42166 694 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-211ENST00000578996 HTRA3P83110 453 aa12.09□□□□□ -0.47
CDK5RAP3-211ENST00000578996 FSTL1Q12841 308 aa12.09□□□□□ -0.47
CDK5RAP3-211ENST00000578996 CCDC93Q567U6 631 aa12.09□□□□□ -0.47
CDK5RAP3-211ENST00000578996 NUTM1Q86Y26 1132 aa12.09□□□□□ -0.47
CDK5RAP3-211ENST00000578996 NYXQ9GZU5 481 aa12.09□□□□□ -0.47
CDK5RAP3-211ENST00000578996 LAS1LQ9Y4W2 734 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-211ENST00000578996 ERVV-1B6SEH8 477 aa12.08□□□□□ -0.48
CDK5RAP3-211ENST00000578996 RGL2O15211 777 aa12.08□□□□□ -0.48
CDK5RAP3-211ENST00000578996 VEGFAP15692 232 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-211ENST00000578996 SMC1BQ8NDV3 1235 aa12.08□□□□□ -0.48
CDK5RAP3-211ENST00000578996 NECTIN2Q92692 538 aa12.08□□□□□ -0.48
CDK5RAP3-211ENST00000578996 SLX4Q8IY92 1834 aa12.08□□□□□ -0.48
CDK5RAP3-211ENST00000578996 ABCC12Q96J65 1359 aa12.07□□□□□ -0.48
CDK5RAP3-211ENST00000578996 ANXA1P04083 346 aa12.07□□□□□ -0.48
CDK5RAP3-211ENST00000578996 OLFM4Q6UX06 510 aa12.07□□□□□ -0.48
CDK5RAP3-211ENST00000578996 LTBP3Q9NS15 1303 aa12.07□□□□□ -0.48
CDK5RAP3-211ENST00000578996 FER1L6Q2WGJ9 1857 aa12.06□□□□□ -0.48
CDK5RAP3-211ENST00000578996 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
CDK5RAP3-211ENST00000578996 ARFGEF2Q9Y6D5 1785 aa12.06□□□□□ -0.48
CDK5RAP3-211ENST00000578996 ALDH1B1P30837 517 aa12.06□□□□□ -0.48
CDK5RAP3-211ENST00000578996 RPGRQ92834 1020 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-211ENST00000578996 RUNDC1Q96C34 613 aa12.06□□□□□ -0.48
CDK5RAP3-211ENST00000578996 ERBB4Q15303 1308 aa12.06□□□□□ -0.48
CDK5RAP3-211ENST00000578996 UBN2Q6ZU65 1347 aa12.06□□□□□ -0.48
CDK5RAP3-211ENST00000578996 WDR90Q96KV7 1748 aa12.06□□□□□ -0.48
CDK5RAP3-211ENST00000578996 KLRG2A4D1S0 409 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-211ENST00000578996 DDNO94850 711 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-211ENST00000578996 FKBP4Q02790 459 aaKnown RBP eCLIP12.05□□□□□ -0.48
CDK5RAP3-211ENST00000578996 AIMP1Q12904 312 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-211ENST00000578996 SUSD4Q5VX71 490 aa12.05□□□□□ -0.48
CDK5RAP3-211ENST00000578996 ZNF277Q9NRM2 450 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-211ENST00000578996 TCERG1O14776 1098 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-211ENST00000578996 KRT24Q2M2I5 525 aa12.04□□□□□ -0.48
CDK5RAP3-211ENST00000578996 PROSER3Q2NL68 480 aa12.04□□□□□ -0.48
CDK5RAP3-211ENST00000578996 GIGYF2Q6Y7W6 1299 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-211ENST00000578996 PPP1R42Q7Z4L9 355 aa12.04□□□□□ -0.48
CDK5RAP3-211ENST00000578996 RTKN2Q8IZC4 609 aa12.04□□□□□ -0.48
CDK5RAP3-211ENST00000578996 C7orf43Q8WVR3 580 aa12.04□□□□□ -0.48
CDK5RAP3-211ENST00000578996 BABAM1Q9NWV8 329 aa12.04□□□□□ -0.48
CDK5RAP3-211ENST00000578996 ADAMTS8Q9UP79 889 aa12.04□□□□□ -0.48
CDK5RAP3-211ENST00000578996 NUP98P52948 1817 aa12.03□□□□□ -0.48
CDK5RAP3-211ENST00000578996 POTECB2RU33 542 aa12.03□□□□□ -0.48
CDK5RAP3-211ENST00000578996 PDIA6Q15084 440 aa12.03□□□□□ -0.48
CDK5RAP3-211ENST00000578996 ZNF34Q8IZ26 560 aa12.03□□□□□ -0.48
CDK5RAP3-211ENST00000578996 DNAJC5GQ8N7S2 189 aa12.03□□□□□ -0.48
CDK5RAP3-211ENST00000578996 NTSR2O95665 410 aa12.02□□□□□ -0.49
CDK5RAP3-211ENST00000578996 IARSP41252 1262 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-211ENST00000578996 CRY2Q49AN0 593 aa12.02□□□□□ -0.49
CDK5RAP3-211ENST00000578996 PARP10Q53GL7 1025 aa12.02□□□□□ -0.49
CDK5RAP3-211ENST00000578996 COPS6Q7L5N1 327 aa12.02□□□□□ -0.49
CDK5RAP3-211ENST00000578996 SYNE4Q8N205 404 aa12.02□□□□□ -0.49
CDK5RAP3-211ENST00000578996 XAGE3Q8WTP9 111 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms