RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 GUCA2AQ02747 115 aa5.53□□□□□ -1.52
SMARCE1-215ENST00000578995 NBPF8Q3BBV2 869 aa5.53□□□□□ -1.52
SMARCE1-215ENST00000578995 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.53□□□□□ -1.52
SMARCE1-215ENST00000578995 L3MBTL2Q969R5 705 aa5.53□□□□□ -1.52
SMARCE1-215ENST00000578995 TBX22Q9Y458 520 aa5.53□□□□□ -1.52
SMARCE1-215ENST00000578995 YTHDC2Q9H6S0 1430 aaKnown RBP5.53□□□□□ -1.52
SMARCE1-215ENST00000578995 MARF1Q9Y4F3 1742 aaKnown RBP5.52□□□□□ -1.53
SMARCE1-215ENST00000578995 CRYBG1Q9Y4K1 1723 aa5.52□□□□□ -1.53
SMARCE1-215ENST00000578995 KRBA1A5PL33 1030 aa5.52□□□□□ -1.53
SMARCE1-215ENST00000578995 GRM5P41594 1212 aa5.52□□□□□ -1.53
SMARCE1-215ENST00000578995 RGL3Q3MIN7 710 aa5.52□□□□□ -1.53
SMARCE1-215ENST00000578995 SLC26A8Q96RN1 970 aa5.52□□□□□ -1.53
SMARCE1-215ENST00000578995 C14orf93Q9H972 538 aaKnown RBP5.52□□□□□ -1.53
SMARCE1-215ENST00000578995 TULP4Q9NRJ4 1543 aa5.52□□□□□ -1.53
SMARCE1-215ENST00000578995 LRPPRCP42704 1394 aaKnown RBP5.52□□□□□ -1.53
SMARCE1-215ENST00000578995 ROBO2Q9HCK4 1378 aa5.52□□□□□ -1.53
SMARCE1-215ENST00000578995 FAM135BQ49AJ0 1406 aa5.51□□□□□ -1.53
SMARCE1-215ENST00000578995 ROBO1Q9Y6N7 1651 aa5.51□□□□□ -1.53
SMARCE1-215ENST00000578995 ZNF326Q5BKZ1 582 aaKnown RBP5.51□□□□□ -1.53
SMARCE1-215ENST00000578995 ZMYM1Q5SVZ6 1142 aa5.51□□□□□ -1.53
SMARCE1-215ENST00000578995 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.51□□□□□ -1.53
SMARCE1-215ENST00000578995 EID1Q9Y6B2 187 aa5.51□□□□□ -1.53
SMARCE1-215ENST00000578995 EMILIN1Q9Y6C2 1016 aa5.51□□□□□ -1.53
SMARCE1-215ENST00000578995 ABCC11Q96J66 1382 aa5.51□□□□□ -1.53
SMARCE1-215ENST00000578995 MON2Q7Z3U7 1717 aa5.51□□□□□ -1.53
SMARCE1-215ENST00000578995 ABCA3Q99758 1704 aa5.51□□□□□ -1.53
SMARCE1-215ENST00000578995 TRPM3Q9HCF6 1732 aaPredicted RBP5.51□□□□□ -1.53
SMARCE1-215ENST00000578995 NRKQ7Z2Y5 1582 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 ADGRL3Q9HAR2 1447 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 NCOA3Q9Y6Q9 1424 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 C6orf229H3BNL8 230 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 SPINT1O43278 529 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 KCNA6P17658 529 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 GAS6Q14393 721 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 CFAP70Q5T0N1 1121 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 KCNV2Q8TDN2 545 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 DCAF11Q8TEB1 546 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 GOLGA2P5Q9HBQ8 144 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 MBIPQ9NS73 344 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 LRRC4BQ9NT99 713 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 PLEKHH1Q9ULM0 1364 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 KIF1AQ12756 1690 aa5.5□□□□□ -1.53
SMARCE1-215ENST00000578995 DCCP43146 1447 aa5.49□□□□□ -1.53
SMARCE1-215ENST00000578995 COL16A1Q07092 1604 aaPredicted RBP5.49□□□□□ -1.53
SMARCE1-215ENST00000578995 NEUROD1Q13562 356 aa5.49□□□□□ -1.53
SMARCE1-215ENST00000578995 NBPF1Q3BBV0 1214 aa5.49□□□□□ -1.53
SMARCE1-215ENST00000578995 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
SMARCE1-215ENST00000578995 FOXJ1Q92949 421 aa5.49□□□□□ -1.53
SMARCE1-215ENST00000578995 TONSLQ96HA7 1378 aa5.49□□□□□ -1.53
SMARCE1-215ENST00000578995 USP54Q70EL1 1684 aa5.49□□□□□ -1.53
SMARCE1-215ENST00000578995 ALS2Q96Q42 1657 aa5.49□□□□□ -1.53
SMARCE1-215ENST00000578995 MST1RQ04912 1400 aa5.48□□□□□ -1.53
SMARCE1-215ENST00000578995 AHDC1Q5TGY3 1603 aaPredicted RBP5.48□□□□□ -1.53
SMARCE1-215ENST00000578995 ATP7BP35670 1465 aa5.48□□□□□ -1.53
SMARCE1-215ENST00000578995 TMEM94Q12767 1356 aa5.48□□□□□ -1.53
SMARCE1-215ENST00000578995 PPP1R15AO75807 674 aaPredicted RBP5.48□□□□□ -1.53
SMARCE1-215ENST00000578995 TMEM132EQ6IEE7 984 aa5.48□□□□□ -1.53
SMARCE1-215ENST00000578995 TIMELESSQ9UNS1 1208 aa5.48□□□□□ -1.53
SMARCE1-215ENST00000578995 PHLPP1O60346 1717 aa5.48□□□□□ -1.53
SMARCE1-215ENST00000578995 SHPRHQ149N8 1683 aa5.47□□□□□ -1.53
SMARCE1-215ENST00000578995 SBNO2Q9Y2G9 1366 aa5.47□□□□□ -1.53
SMARCE1-215ENST00000578995 AGERQ15109 404 aa5.47□□□□□ -1.53
SMARCE1-215ENST00000578995 CCER1Q8TC90 406 aaPredicted RBP5.47□□□□□ -1.53
SMARCE1-215ENST00000578995 SIRT1Q96EB6 747 aa5.47□□□□□ -1.53
SMARCE1-215ENST00000578995 AMOTL2Q9Y2J4 779 aa5.47□□□□□ -1.53
SMARCE1-215ENST00000578995 KDM2AQ9Y2K7 1162 aa5.47□□□□□ -1.53
SMARCE1-215ENST00000578995 COL22A1Q8NFW1 1626 aaPredicted RBP5.47□□□□□ -1.53
SMARCE1-215ENST00000578995 SCO2A0A1W2PP80 73 aa5.46□□□□□ -1.54
SMARCE1-215ENST00000578995 SEMA3EO15041 775 aa5.46□□□□□ -1.54
SMARCE1-215ENST00000578995 GPR37O15354 613 aa5.46□□□□□ -1.54
SMARCE1-215ENST00000578995 FDX1P10109 184 aa5.46□□□□□ -1.54
SMARCE1-215ENST00000578995 FSHRP23945 695 aa5.46□□□□□ -1.54
SMARCE1-215ENST00000578995 CTHP32929 405 aa5.46□□□□□ -1.54
SMARCE1-215ENST00000578995 RBM26Q5T8P6 1007 aaKnown RBP5.46□□□□□ -1.54
SMARCE1-215ENST00000578995 DESI1Q6ICB0 168 aa5.46□□□□□ -1.54
SMARCE1-215ENST00000578995 NUTM1Q86Y26 1132 aa5.46□□□□□ -1.54
SMARCE1-215ENST00000578995 CCDC116Q8IYX3 515 aa5.46□□□□□ -1.54
SMARCE1-215ENST00000578995 SEMA6BQ9H3T3 888 aa5.46□□□□□ -1.54
SMARCE1-215ENST00000578995 ANKRD26Q9UPS8 1709 aa5.45□□□□□ -1.54
SMARCE1-215ENST00000578995 PIK3C2AO00443 1686 aa5.45□□□□□ -1.54
SMARCE1-215ENST00000578995 ITGB7P26010 798 aa5.45□□□□□ -1.54
SMARCE1-215ENST00000578995 FOXR1Q6PIV2 292 aa5.45□□□□□ -1.54
SMARCE1-215ENST00000578995 BPHLQ86WA6 291 aaPredicted RBP5.45□□□□□ -1.54
SMARCE1-215ENST00000578995 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
SMARCE1-215ENST00000578995 MKL2Q9ULH7 1088 aa5.45□□□□□ -1.54
SMARCE1-215ENST00000578995 KIF20BQ96Q89 1820 aa5.45□□□□□ -1.54
SMARCE1-215ENST00000578995 PXDNQ92626 1479 aa5.45□□□□□ -1.54
SMARCE1-215ENST00000578995 PHRF1Q9P1Y6 1649 aaKnown RBP5.45□□□□□ -1.54
SMARCE1-215ENST00000578995 ROCK2O75116 1388 aaKnown RBP5.44□□□□□ -1.54
SMARCE1-215ENST00000578995 SENP3-EIF4A1A0A087X0R7 540 aa5.44□□□□□ -1.54
SMARCE1-215ENST00000578995 SMYD5Q6GMV2 418 aa5.44□□□□□ -1.54
SMARCE1-215ENST00000578995 Q6ZVU0 165 aa5.44□□□□□ -1.54
SMARCE1-215ENST00000578995 ANKARQ7Z5J8 1434 aa5.44□□□□□ -1.54
SMARCE1-215ENST00000578995 WAPLQ7Z5K2 1190 aa5.44□□□□□ -1.54
SMARCE1-215ENST00000578995 PRR7Q8TB68 274 aa5.44□□□□□ -1.54
SMARCE1-215ENST00000578995 ACDQ96AP0 544 aa5.44□□□□□ -1.54
SMARCE1-215ENST00000578995 GMCL1Q96IK5 515 aa5.44□□□□□ -1.54
SMARCE1-215ENST00000578995 PGPEP1Q9NXJ5 209 aa5.44□□□□□ -1.54
SMARCE1-215ENST00000578995 PCDHGC3Q9UN70 934 aa5.44□□□□□ -1.54
SMARCE1-215ENST00000578995 MAP4K5Q9Y4K4 846 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms