RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 NEUROD2Q15784 382 aa11.13□□□□□ -0.63
PPP4R1-210ENST00000578557 CCDC146Q8IYE0 955 aa11.13□□□□□ -0.63
PPP4R1-210ENST00000578557 FHDC1Q9C0D6 1143 aaPredicted RBP11.13□□□□□ -0.63
PPP4R1-210ENST00000578557 ZBTB1Q9Y2K1 713 aa11.13□□□□□ -0.63
PPP4R1-210ENST00000578557 MMP10P09238 476 aa11.12□□□□□ -0.63
PPP4R1-210ENST00000578557 SETDB2Q96T68 719 aa11.12□□□□□ -0.63
PPP4R1-210ENST00000578557 COL15A1P39059 1388 aa11.12□□□□□ -0.63
PPP4R1-210ENST00000578557 USPL1Q5W0Q7 1092 aa11.11□□□□□ -0.63
PPP4R1-210ENST00000578557 DZIP3Q86Y13 1208 aaKnown RBP11.11□□□□□ -0.63
PPP4R1-210ENST00000578557 DBF4Q9UBU7 674 aaPredicted RBP11.11□□□□□ -0.63
PPP4R1-210ENST00000578557 C5P01031 1676 aa11.11□□□□□ -0.63
PPP4R1-210ENST00000578557 KCPQ6ZWJ8 1503 aa11.1□□□□□ -0.63
PPP4R1-210ENST00000578557 C4BP0C0L5 1744 aa11.1□□□□□ -0.63
PPP4R1-210ENST00000578557 KCNQ3O43525 872 aa11.1□□□□□ -0.63
PPP4R1-210ENST00000578557 A1BGP04217 495 aa11.1□□□□□ -0.63
PPP4R1-210ENST00000578557 HSP90AB3PQ58FF7 597 aa11.1□□□□□ -0.63
PPP4R1-210ENST00000578557 TPTE2Q6XPS3 522 aa11.1□□□□□ -0.63
PPP4R1-210ENST00000578557 WWC1Q8IX03 1113 aa11.1□□□□□ -0.63
PPP4R1-210ENST00000578557 HYPKQ9NX55 129 aa11.1□□□□□ -0.63
PPP4R1-210ENST00000578557 PCDHB8Q9UN66 801 aa11.1□□□□□ -0.63
PPP4R1-210ENST00000578557 TOGARAM1Q9Y4F4 1720 aa11.09□□□□□ -0.63
PPP4R1-210ENST00000578557 RIOK3O14730 519 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-210ENST00000578557 HSP90B1P14625 803 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-210ENST00000578557 KIF6Q6ZMV9 814 aa11.09□□□□□ -0.63
PPP4R1-210ENST00000578557 RNF25Q96BH1 459 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-210ENST00000578557 NYXQ9GZU5 481 aa11.09□□□□□ -0.63
PPP4R1-210ENST00000578557 MYH16Q9H6N6 1097 aa11.09□□□□□ -0.63
PPP4R1-210ENST00000578557 DDX21Q9NR30 783 aaKnown RBP eCLIP11.09□□□□□ -0.63
PPP4R1-210ENST00000578557 MIS18AQ9NYP9 233 aa11.09□□□□□ -0.63
PPP4R1-210ENST00000578557 RRP7AQ9Y3A4 280 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-210ENST00000578557 CICQ96RK0 1608 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-210ENST00000578557 RNF123Q5XPI4 1314 aa11.09□□□□□ -0.63
PPP4R1-210ENST00000578557 PDE6BP35913 854 aa11.08□□□□□ -0.64
PPP4R1-210ENST00000578557 PARP10Q53GL7 1025 aa11.08□□□□□ -0.64
PPP4R1-210ENST00000578557 CCDC30Q5VVM6 783 aa11.08□□□□□ -0.64
PPP4R1-210ENST00000578557 AMIGO3Q86WK7 504 aa11.08□□□□□ -0.64
PPP4R1-210ENST00000578557 BRIP1Q9BX63 1249 aa11.08□□□□□ -0.64
PPP4R1-210ENST00000578557 LAS1LQ9Y4W2 734 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-210ENST00000578557 SCN11AQ9UI33 1791 aa11.08□□□□□ -0.64
PPP4R1-210ENST00000578557 QSER1Q2KHR3 1735 aa11.07□□□□□ -0.64
PPP4R1-210ENST00000578557 POLRMTO00411 1230 aaKnown RBP11.07□□□□□ -0.64
PPP4R1-210ENST00000578557 CAMTA2O94983 1202 aa11.07□□□□□ -0.64
PPP4R1-210ENST00000578557 SERPINB2P05120 415 aa11.07□□□□□ -0.64
PPP4R1-210ENST00000578557 GOLGA2Q08379 1002 aa11.07□□□□□ -0.64
PPP4R1-210ENST00000578557 GPR162Q16538 588 aa11.07□□□□□ -0.64
PPP4R1-210ENST00000578557 DIEXFQ68CQ4 756 aaKnown RBP11.07□□□□□ -0.64
PPP4R1-210ENST00000578557 MSL1Q68DK7 614 aa11.07□□□□□ -0.64
PPP4R1-210ENST00000578557 FAM9BQ8IZU0 186 aa11.07□□□□□ -0.64
PPP4R1-210ENST00000578557 ZNF428Q96B54 188 aa11.07□□□□□ -0.64
PPP4R1-210ENST00000578557 THUMPD2Q9BTF0 503 aaKnown RBP11.07□□□□□ -0.64
PPP4R1-210ENST00000578557 MBIPQ9NS73 344 aa11.07□□□□□ -0.64
PPP4R1-210ENST00000578557 CARMIL3Q8ND23 1372 aa11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 CASZ1Q86V15 1759 aa11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 NPHP1O15259 732 aa11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 DDX58O95786 925 aaKnown RBP11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 TIE1P35590 1138 aa11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 ST5P78524 1137 aa11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 NFIXQ14938 502 aa11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 HDGFL1Q5TGJ6 251 aa11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 DUSP27Q5VZP5 1158 aa11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 GIGYF2Q6Y7W6 1299 aaKnown RBP11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 PPP1R42Q7Z4L9 355 aa11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 PIM2Q9P1W9 311 aa11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 TBC1D2BQ9UPU7 963 aa11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 ZNF330Q9Y3S2 320 aaPredicted RBP11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 ITGB4P16144 1822 aa11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 MAP3K15Q6ZN16 1313 aa11.06□□□□□ -0.64
PPP4R1-210ENST00000578557 NBPF26B4DH59 902 aa11.05□□□□□ -0.64
PPP4R1-210ENST00000578557 H0YIN7 160 aa11.05□□□□□ -0.64
PPP4R1-210ENST00000578557 EIF2S2P20042 333 aaKnown RBP11.05□□□□□ -0.64
PPP4R1-210ENST00000578557 GRIPAP1Q4V328 841 aa11.05□□□□□ -0.64
PPP4R1-210ENST00000578557 CCDC184Q52MB2 194 aa11.05□□□□□ -0.64
PPP4R1-210ENST00000578557 NBPF10Q6P3W6 841 aaKnown RBP11.05□□□□□ -0.64
PPP4R1-210ENST00000578557 NBPF15Q8N660 670 aa11.05□□□□□ -0.64
PPP4R1-210ENST00000578557 DCBLD2Q96PD2 775 aa11.05□□□□□ -0.64
PPP4R1-210ENST00000578557 STK31Q9BXU1 1019 aa11.05□□□□□ -0.64
PPP4R1-210ENST00000578557 BCL2L12Q9HB09 334 aa11.05□□□□□ -0.64
PPP4R1-210ENST00000578557 SRP68Q9UHB9 627 aaKnown RBP11.05□□□□□ -0.64
PPP4R1-210ENST00000578557 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
PPP4R1-210ENST00000578557 TRPC6Q9Y210 931 aa11.05□□□□□ -0.64
PPP4R1-210ENST00000578557 GTF2E1P29083 439 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-210ENST00000578557 TRIM28Q13263 835 aaKnown RBP11.04□□□□□ -0.64
PPP4R1-210ENST00000578557 PDAP1Q13442 181 aaKnown RBP11.04□□□□□ -0.64
PPP4R1-210ENST00000578557 SOGA3Q5TF21 947 aa11.04□□□□□ -0.64
PPP4R1-210ENST00000578557 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
PPP4R1-210ENST00000578557 SRCAPQ6ZRS2 3230 aa11.04□□□□□ -0.64
PPP4R1-210ENST00000578557 KLRG2A4D1S0 409 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-210ENST00000578557 E9PSI1 815 aa11.03□□□□□ -0.64
PPP4R1-210ENST00000578557 CT47B1P0C2W7 299 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-210ENST00000578557 PDIA6Q15084 440 aa11.03□□□□□ -0.64
PPP4R1-210ENST00000578557 NBPF5PQ86XG9 351 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-210ENST00000578557 CNBD1Q8NA66 436 aa11.03□□□□□ -0.64
PPP4R1-210ENST00000578557 PLBD2Q8NHP8 589 aa11.03□□□□□ -0.64
PPP4R1-210ENST00000578557 CNKSR1Q969H4 720 aa11.03□□□□□ -0.64
PPP4R1-210ENST00000578557 NIP7Q9Y221 180 aaKnown RBP eCLIP11.03□□□□□ -0.64
PPP4R1-210ENST00000578557 IBTKQ9P2D0 1353 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-210ENST00000578557 PRAMEF22A3QJZ6 481 aa11.02□□□□□ -0.65
PPP4R1-210ENST00000578557 MYL6BP14649 208 aa11.02□□□□□ -0.65
PPP4R1-210ENST00000578557 ALDH1B1P30837 517 aa11.02□□□□□ -0.65
PPP4R1-210ENST00000578557 TBC1D9BQ66K14 1250 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms