RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 LAMB4A4D0S4 1761 aa30.05■■■□□ 2.4
VAPA-205ENST00000578314 ERVV-1B6SEH8 477 aa30.05■■■□□ 2.4
VAPA-205ENST00000578314 HLFQ16534 295 aa30.05■■■□□ 2.4
VAPA-205ENST00000578314 BCORQ6W2J9 1755 aa30.05■■■□□ 2.4
VAPA-205ENST00000578314 CCDC184Q52MB2 194 aa30.04■■■□□ 2.4
VAPA-205ENST00000578314 NGEFQ8N5V2 710 aa30.04■■■□□ 2.4
VAPA-205ENST00000578314 TTLL6Q8N841 843 aa30.04■■■□□ 2.4
VAPA-205ENST00000578314 APAF1O14727 1248 aa30.03■■■□□ 2.4
VAPA-205ENST00000578314 MYL6BP14649 208 aa30.03■■■□□ 2.4
VAPA-205ENST00000578314 CCDC24Q8N4L8 307 aa30.03■■■□□ 2.4
VAPA-205ENST00000578314 NIP7Q9Y221 180 aaKnown RBP eCLIP30.03■■■□□ 2.4
VAPA-205ENST00000578314 ST5P78524 1137 aa30.02■■■□□ 2.4
VAPA-205ENST00000578314 PDIA6Q15084 440 aa30.02■■■□□ 2.4
VAPA-205ENST00000578314 NBPF5PQ86XG9 351 aaPredicted RBP30.02■■■□□ 2.4
VAPA-205ENST00000578314 MAP3K15Q6ZN16 1313 aa30.01■■■□□ 2.4
VAPA-205ENST00000578314 EIF2S2P20042 333 aaKnown RBP30.01■■■□□ 2.39
VAPA-205ENST00000578314 TTLL7Q6ZT98 887 aa30.01■■■□□ 2.39
VAPA-205ENST00000578314 LRP10Q7Z4F1 713 aa30.01■■■□□ 2.39
VAPA-205ENST00000578314 LAS1LQ9Y4W2 734 aaKnown RBP30.01■■■□□ 2.39
VAPA-205ENST00000578314 NPHP1O15259 732 aa30■■■□□ 2.39
VAPA-205ENST00000578314 TPTE2Q6XPS3 522 aa30■■■□□ 2.39
VAPA-205ENST00000578314 KIF6Q6ZMV9 814 aa30■■■□□ 2.39
VAPA-205ENST00000578314 CFAP44Q96MT7 982 aa30■■■□□ 2.39
VAPA-205ENST00000578314 ANP32CO43423 234 aa29.98■■■□□ 2.39
VAPA-205ENST00000578314 DLEC1Q9Y238 1755 aa29.98■■■□□ 2.39
VAPA-205ENST00000578314 ZNF622Q969S3 477 aaKnown RBP eCLIP29.97■■■□□ 2.39
VAPA-205ENST00000578314 ZNF853P0CG23 659 aa29.96■■■□□ 2.39
VAPA-205ENST00000578314 KRT24Q2M2I5 525 aa29.96■■■□□ 2.39
VAPA-205ENST00000578314 SRGNP10124 158 aa29.95■■■□□ 2.39
VAPA-205ENST00000578314 PROSER3Q2NL68 480 aa29.95■■■□□ 2.39
VAPA-205ENST00000578314 C9orf131Q5VYM1 1079 aa29.95■■■□□ 2.39
VAPA-205ENST00000578314 KLRG2A4D1S0 409 aaPredicted RBP29.94■■■□□ 2.38
VAPA-205ENST00000578314 KIF3CO14782 793 aa29.94■■■□□ 2.38
VAPA-205ENST00000578314 HOXB7P09629 217 aa29.94■■■□□ 2.38
VAPA-205ENST00000578314 STYK1Q6J9G0 422 aa29.94■■■□□ 2.38
VAPA-205ENST00000578314 ZBTB3Q9H5J0 574 aa29.94■■■□□ 2.38
VAPA-205ENST00000578314 ANKRD31Q8N7Z5 1873 aa29.93■■■□□ 2.38
VAPA-205ENST00000578314 CALD1Q05682 793 aaKnown RBP29.93■■■□□ 2.38
VAPA-205ENST00000578314 GIGYF2Q6Y7W6 1299 aaKnown RBP29.93■■■□□ 2.38
VAPA-205ENST00000578314 MASTLQ96GX5 879 aa29.93■■■□□ 2.38
VAPA-205ENST00000578314 CNKSR1Q969H4 720 aa29.92■■■□□ 2.38
VAPA-205ENST00000578314 MBIPQ9NS73 344 aa29.92■■■□□ 2.38
VAPA-205ENST00000578314 IFT57Q9NWB7 429 aa29.92■■■□□ 2.38
VAPA-205ENST00000578314 FAM177BA6PVY3 158 aa29.91■■■□□ 2.38
VAPA-205ENST00000578314 ANXA1P04083 346 aa29.91■■■□□ 2.38
VAPA-205ENST00000578314 ZNF34Q8IZ26 560 aa29.91■■■□□ 2.38
VAPA-205ENST00000578314 NECTIN2Q92692 538 aa29.91■■■□□ 2.38
VAPA-205ENST00000578314 NYXQ9GZU5 481 aa29.91■■■□□ 2.38
VAPA-205ENST00000578314 DDX21Q9NR30 783 aaKnown RBP eCLIP29.91■■■□□ 2.38
VAPA-205ENST00000578314 MRS2Q9HD23 443 aa29.9■■■□□ 2.38
VAPA-205ENST00000578314 CEP350Q5VT06 3117 aa29.9■■■□□ 2.38
VAPA-205ENST00000578314 GNAI1P63096 354 aa29.89■■■□□ 2.38
VAPA-205ENST00000578314 SBF1O95248 1867 aa29.89■■■□□ 2.37
VAPA-205ENST00000578314 GTF2E1P29083 439 aaPredicted RBP29.88■■■□□ 2.37
VAPA-205ENST00000578314 COPS6Q7L5N1 327 aa29.88■■■□□ 2.37
VAPA-205ENST00000578314 RNF181Q9P0P0 153 aa29.88■■■□□ 2.37
VAPA-205ENST00000578314 UBN2Q6ZU65 1347 aa29.88■■■□□ 2.37
VAPA-205ENST00000578314 C21orf2O43822 256 aa29.87■■■□□ 2.37
VAPA-205ENST00000578314 GPTP24298 496 aa29.87■■■□□ 2.37
VAPA-205ENST00000578314 HDGFL1Q5TGJ6 251 aa29.87■■■□□ 2.37
VAPA-205ENST00000578314 IBTKQ9P2D0 1353 aaPredicted RBP29.87■■■□□ 2.37
VAPA-205ENST00000578314 NPR1P16066 1061 aa29.86■■■□□ 2.37
VAPA-205ENST00000578314 RASSF7Q02833 373 aa29.86■■■□□ 2.37
VAPA-205ENST00000578314 SUSD4Q5VX71 490 aa29.86■■■□□ 2.37
VAPA-205ENST00000578314 DUSP27Q5VZP5 1158 aa29.86■■■□□ 2.37
VAPA-205ENST00000578314 XAGE3Q8WTP9 111 aa29.86■■■□□ 2.37
VAPA-205ENST00000578314 NFKBIEO00221 500 aa29.85■■■□□ 2.37
VAPA-205ENST00000578314 CCDC27Q2M243 656 aa29.85■■■□□ 2.37
VAPA-205ENST00000578314 PRPF40BQ6NWY9 871 aaKnown RBP29.85■■■□□ 2.37
VAPA-205ENST00000578314 CHPF2Q9P2E5 772 aa29.85■■■□□ 2.37
VAPA-205ENST00000578314 COL11A2P13942 1736 aaPredicted RBP29.85■■■□□ 2.37
VAPA-205ENST00000578314 LMNB1P20700 586 aa29.84■■■□□ 2.37
VAPA-205ENST00000578314 PRELPP51888 382 aa29.84■■■□□ 2.37
VAPA-205ENST00000578314 NCBP3Q53F19 620 aaKnown RBP29.84■■■□□ 2.37
VAPA-205ENST00000578314 PARP10Q53GL7 1025 aa29.84■■■□□ 2.37
VAPA-205ENST00000578314 NUTM1Q86Y26 1132 aa29.84■■■□□ 2.37
VAPA-205ENST00000578314 HSPA6P17066 643 aa29.83■■■□□ 2.37
VAPA-205ENST00000578314 AIMP1Q12904 312 aaKnown RBP29.83■■■□□ 2.37
VAPA-205ENST00000578314 ERFEQ4G0M1 354 aa29.83■■■□□ 2.37
VAPA-205ENST00000578314 NMRK2Q9NPI5 230 aa29.83■■■□□ 2.37
VAPA-205ENST00000578314 DBF4Q9UBU7 674 aaPredicted RBP29.83■■■□□ 2.37
VAPA-205ENST00000578314 PPP1R42Q7Z4L9 355 aa29.82■■■□□ 2.36
VAPA-205ENST00000578314 C7orf43Q8WVR3 580 aa29.82■■■□□ 2.36
VAPA-205ENST00000578314 ZNF219Q9P2Y4 722 aaPredicted RBP29.82■■■□□ 2.36
VAPA-205ENST00000578314 NUP98P52948 1817 aa29.82■■■□□ 2.36
VAPA-205ENST00000578314 ABCC12Q96J65 1359 aa29.81■■■□□ 2.36
VAPA-205ENST00000578314 NTSR2O95665 410 aa29.81■■■□□ 2.36
VAPA-205ENST00000578314 CRY2Q49AN0 593 aa29.81■■■□□ 2.36
VAPA-205ENST00000578314 HSP90AB3PQ58FF7 597 aa29.81■■■□□ 2.36
VAPA-205ENST00000578314 SOGA3Q5TF21 947 aa29.81■■■□□ 2.36
VAPA-205ENST00000578314 ZC3H4Q9UPT8 1303 aaKnown RBP29.8■■■□□ 2.36
VAPA-205ENST00000578314 TOMM70O94826 608 aa29.79■■■□□ 2.36
VAPA-205ENST00000578314 WWC1Q8IX03 1113 aa29.79■■■□□ 2.36
VAPA-205ENST00000578314 RIC1Q4ADV7 1423 aa29.79■■■□□ 2.36
VAPA-205ENST00000578314 KDM2BQ8NHM5 1336 aa29.78■■■□□ 2.36
VAPA-205ENST00000578314 LTBP3Q9NS15 1303 aa29.78■■■□□ 2.36
VAPA-205ENST00000578314 ALDH1B1P30837 517 aa29.78■■■□□ 2.36
VAPA-205ENST00000578314 TCIRG1Q13488 830 aa29.78■■■□□ 2.36
VAPA-205ENST00000578314 HYPKQ9NX55 129 aa29.78■■■□□ 2.36
VAPA-205ENST00000578314 UTP14AQ9BVJ6 771 aaKnown RBP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms