RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 MAP3K15Q6ZN16 1313 aa29.96■■■□□ 2.39
LIMD2-204ENST00000578297 GPR162Q16538 588 aa29.96■■■□□ 2.39
LIMD2-204ENST00000578297 PROSER3Q2NL68 480 aa29.96■■■□□ 2.39
LIMD2-204ENST00000578297 KIF6Q6ZMV9 814 aa29.96■■■□□ 2.39
LIMD2-204ENST00000578297 TTLL7Q6ZT98 887 aa29.96■■■□□ 2.39
LIMD2-204ENST00000578297 DDX21Q9NR30 783 aaKnown RBP eCLIP29.96■■■□□ 2.39
LIMD2-204ENST00000578297 PXDNLA1KZ92 1463 aa29.95■■■□□ 2.39
LIMD2-204ENST00000578297 HLFQ16534 295 aa29.95■■■□□ 2.39
LIMD2-204ENST00000578297 KIAA1551Q9HCM1 1747 aa29.95■■■□□ 2.38
LIMD2-204ENST00000578297 ANXA1P04083 346 aa29.94■■■□□ 2.38
LIMD2-204ENST00000578297 C8orf58Q8NAV2 365 aa29.94■■■□□ 2.38
LIMD2-204ENST00000578297 TSR2Q969E8 191 aaKnown RBP29.94■■■□□ 2.38
LIMD2-204ENST00000578297 CHPF2Q9P2E5 772 aa29.93■■■□□ 2.38
LIMD2-204ENST00000578297 ELL2O00472 640 aaPredicted RBP29.92■■■□□ 2.38
LIMD2-204ENST00000578297 PELP1Q8IZL8 1130 aaKnown RBP29.92■■■□□ 2.38
LIMD2-204ENST00000578297 DBF4Q9UBU7 674 aaPredicted RBP29.92■■■□□ 2.38
LIMD2-204ENST00000578297 N4BP2Q86UW6 1770 aaPredicted RBP29.91■■■□□ 2.38
LIMD2-204ENST00000578297 A0A0G2JLW4 131 aa29.91■■■□□ 2.38
LIMD2-204ENST00000578297 MIER1Q8N108 512 aa29.91■■■□□ 2.38
LIMD2-204ENST00000578297 NIP7Q9Y221 180 aaKnown RBP eCLIP29.91■■■□□ 2.38
LIMD2-204ENST00000578297 DPEP1P16444 411 aa29.9■■■□□ 2.38
LIMD2-204ENST00000578297 YBX3P16989 372 aaKnown RBP eCLIP29.9■■■□□ 2.38
LIMD2-204ENST00000578297 ZBTB3Q9H5J0 574 aa29.9■■■□□ 2.38
LIMD2-204ENST00000578297 NUP98P52948 1817 aa29.89■■■□□ 2.38
LIMD2-204ENST00000578297 COPS6Q7L5N1 327 aa29.89■■■□□ 2.38
LIMD2-204ENST00000578297 CHMP4AQ9BY43 222 aa29.89■■■□□ 2.38
LIMD2-204ENST00000578297 PRR5LQ6MZQ0 368 aa29.88■■■□□ 2.37
LIMD2-204ENST00000578297 GIGYF2Q6Y7W6 1299 aaKnown RBP29.88■■■□□ 2.37
LIMD2-204ENST00000578297 TSPYL6Q8N831 410 aa29.88■■■□□ 2.37
LIMD2-204ENST00000578297 XAGE3Q8WTP9 111 aa29.88■■■□□ 2.37
LIMD2-204ENST00000578297 KCNA3P22001 575 aa29.87■■■□□ 2.37
LIMD2-204ENST00000578297 CNBD1Q8NA66 436 aa29.87■■■□□ 2.37
LIMD2-204ENST00000578297 HYPKQ9NX55 129 aa29.87■■■□□ 2.37
LIMD2-204ENST00000578297 ZNF521Q96K83 1311 aa29.87■■■□□ 2.37
LIMD2-204ENST00000578297 FANCIQ9NVI1 1328 aa29.87■■■□□ 2.37
LIMD2-204ENST00000578297 ATP10DQ9P241 1426 aa29.87■■■□□ 2.37
LIMD2-204ENST00000578297 GRIN3BO60391 1043 aa29.86■■■□□ 2.37
LIMD2-204ENST00000578297 AIMP1Q12904 312 aaKnown RBP29.86■■■□□ 2.37
LIMD2-204ENST00000578297 NBPF5PQ86XG9 351 aaPredicted RBP29.85■■■□□ 2.37
LIMD2-204ENST00000578297 BRIP1Q9BX63 1249 aa29.85■■■□□ 2.37
LIMD2-204ENST00000578297 SPINK5Q9NQ38 1064 aaPredicted RBP29.85■■■□□ 2.37
LIMD2-204ENST00000578297 CCDC30Q5VVM6 783 aa29.84■■■□□ 2.37
LIMD2-204ENST00000578297 BRCA1P38398 1863 aaKnown RBP29.83■■■□□ 2.37
LIMD2-204ENST00000578297 NPHP1O15259 732 aa29.83■■■□□ 2.37
LIMD2-204ENST00000578297 CHRNA5P30532 468 aa29.83■■■□□ 2.37
LIMD2-204ENST00000578297 ST5P78524 1137 aa29.83■■■□□ 2.37
LIMD2-204ENST00000578297 TWISTNBQ3B726 338 aaPredicted RBP29.83■■■□□ 2.37
LIMD2-204ENST00000578297 TPTE2Q6XPS3 522 aa29.83■■■□□ 2.37
LIMD2-204ENST00000578297 ZNF34Q8IZ26 560 aa29.83■■■□□ 2.37
LIMD2-204ENST00000578297 WWC3Q9ULE0 1092 aa29.83■■■□□ 2.37
LIMD2-204ENST00000578297 GOLGA2Q08379 1002 aa29.82■■■□□ 2.36
LIMD2-204ENST00000578297 MYH16Q9H6N6 1097 aa29.82■■■□□ 2.36
LIMD2-204ENST00000578297 PIM2Q9P1W9 311 aa29.82■■■□□ 2.36
LIMD2-204ENST00000578297 PDE6BP35913 854 aa29.81■■■□□ 2.36
LIMD2-204ENST00000578297 CCDC24Q8N4L8 307 aa29.81■■■□□ 2.36
LIMD2-204ENST00000578297 PDZRN3Q9UPQ7 1066 aa29.81■■■□□ 2.36
LIMD2-204ENST00000578297 ANKRD31Q8N7Z5 1873 aa29.8■■■□□ 2.36
LIMD2-204ENST00000578297 UBN2Q6ZU65 1347 aa29.79■■■□□ 2.36
LIMD2-204ENST00000578297 GPTP24298 496 aa29.79■■■□□ 2.36
LIMD2-204ENST00000578297 ANKRD13DQ6ZTN6 518 aa29.79■■■□□ 2.36
LIMD2-204ENST00000578297 PLBD2Q8NHP8 589 aa29.79■■■□□ 2.36
LIMD2-204ENST00000578297 NYXQ9GZU5 481 aa29.79■■■□□ 2.36
LIMD2-204ENST00000578297 FAM177BA6PVY3 158 aa29.78■■■□□ 2.36
LIMD2-204ENST00000578297 H0YIN7 160 aa29.78■■■□□ 2.36
LIMD2-204ENST00000578297 HSP90AB3PQ58FF7 597 aa29.78■■■□□ 2.36
LIMD2-204ENST00000578297 C2CD5Q86YS7 1000 aa29.78■■■□□ 2.36
LIMD2-204ENST00000578297 BCS1LQ9Y276 419 aa29.78■■■□□ 2.36
LIMD2-204ENST00000578297 EXOSC9Q06265 439 aaKnown RBP29.77■■■□□ 2.36
LIMD2-204ENST00000578297 PARP10Q53GL7 1025 aa29.77■■■□□ 2.36
LIMD2-204ENST00000578297 IBTKQ9P2D0 1353 aaPredicted RBP29.77■■■□□ 2.36
LIMD2-204ENST00000578297 TCIRG1Q13488 830 aa29.76■■■□□ 2.35
LIMD2-204ENST00000578297 DALRD3Q5D0E6 543 aaKnown RBP29.76■■■□□ 2.35
LIMD2-204ENST00000578297 PHAXQ9H814 394 aaKnown RBP29.76■■■□□ 2.35
LIMD2-204ENST00000578297 DLEC1Q9Y238 1755 aa29.76■■■□□ 2.35
LIMD2-204ENST00000578297 CHD4Q14839 1912 aa29.76■■■□□ 2.35
LIMD2-204ENST00000578297 SUSD4Q5VX71 490 aa29.75■■■□□ 2.35
LIMD2-204ENST00000578297 STK31Q9BXU1 1019 aa29.75■■■□□ 2.35
LIMD2-204ENST00000578297 VAMP4O75379 141 aa29.74■■■□□ 2.35
LIMD2-204ENST00000578297 GTF2E1P29083 439 aaPredicted RBP29.74■■■□□ 2.35
LIMD2-204ENST00000578297 PPP1R42Q7Z4L9 355 aa29.74■■■□□ 2.35
LIMD2-204ENST00000578297 ANKRD36CQ5JPF3 1778 aa29.74■■■□□ 2.35
LIMD2-204ENST00000578297 KLRG2A4D1S0 409 aaPredicted RBP29.72■■■□□ 2.35
LIMD2-204ENST00000578297 YY1P25490 414 aa29.72■■■□□ 2.35
LIMD2-204ENST00000578297 ARFGEF1Q9Y6D6 1849 aa29.72■■■□□ 2.35
LIMD2-204ENST00000578297 E9PSI1 815 aa29.71■■■□□ 2.35
LIMD2-204ENST00000578297 NTSR2O95665 410 aa29.71■■■□□ 2.35
LIMD2-204ENST00000578297 NUTM1Q86Y26 1132 aa29.71■■■□□ 2.35
LIMD2-204ENST00000578297 SRGNP10124 158 aa29.7■■■□□ 2.35
LIMD2-204ENST00000578297 ERFEQ4G0M1 354 aa29.7■■■□□ 2.35
LIMD2-204ENST00000578297 NLRP10Q86W26 655 aa29.7■■■□□ 2.35
LIMD2-204ENST00000578297 TTLL6Q8N841 843 aa29.7■■■□□ 2.35
LIMD2-204ENST00000578297 COL11A2P13942 1736 aaPredicted RBP29.7■■■□□ 2.34
LIMD2-204ENST00000578297 TCERG1O14776 1098 aaKnown RBP29.69■■■□□ 2.34
LIMD2-204ENST00000578297 RIC3Q7Z5B4 369 aa29.69■■■□□ 2.34
LIMD2-204ENST00000578297 UTP14AQ9BVJ6 771 aaKnown RBP29.69■■■□□ 2.34
LIMD2-204ENST00000578297 ARFGEF2Q9Y6D5 1785 aa29.68■■■□□ 2.34
LIMD2-204ENST00000578297 DDX58O95786 925 aaKnown RBP29.68■■■□□ 2.34
LIMD2-204ENST00000578297 SLC4A2P04920 1241 aa29.68■■■□□ 2.34
LIMD2-204ENST00000578297 STYK1Q6J9G0 422 aa29.68■■■□□ 2.34
LIMD2-204ENST00000578297 ZNF622Q969S3 477 aaKnown RBP eCLIP29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms