RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 SLC4A9Q96Q91 983 aa7.76□□□□□ -1.17
IFT20-205ENST00000578009 EEA1Q15075 1411 aa7.76□□□□□ -1.17
IFT20-205ENST00000578009 ELOA3CA0A087WX78 387 aaPredicted RBP7.75□□□□□ -1.17
IFT20-205ENST00000578009 ELOA3DA6NLF2 546 aaPredicted RBP7.75□□□□□ -1.17
IFT20-205ENST00000578009 MTFR1Q15390 333 aa7.75□□□□□ -1.17
IFT20-205ENST00000578009 ELOA3BQ3SY89 546 aa7.75□□□□□ -1.17
IFT20-205ENST00000578009 SYT9Q86SS6 491 aa7.75□□□□□ -1.17
IFT20-205ENST00000578009 ELOA3Q8NG57 546 aa7.75□□□□□ -1.17
IFT20-205ENST00000578009 APBA3O96018 575 aa7.74□□□□□ -1.17
IFT20-205ENST00000578009 ABL2P42684 1182 aa7.74□□□□□ -1.17
IFT20-205ENST00000578009 SEMA3FQ13275 785 aa7.74□□□□□ -1.17
IFT20-205ENST00000578009 RSPO4Q2I0M5 234 aaPredicted RBP7.74□□□□□ -1.17
IFT20-205ENST00000578009 SAMD5Q5TGI4 173 aa7.74□□□□□ -1.17
IFT20-205ENST00000578009 GDPD2Q9HCC8 539 aa7.74□□□□□ -1.17
IFT20-205ENST00000578009 WRNQ14191 1432 aaPredicted RBP eCLIP7.74□□□□□ -1.17
IFT20-205ENST00000578009 FAM229AH3BQW9 127 aa7.73□□□□□ -1.17
IFT20-205ENST00000578009 EFSO43281 561 aa7.73□□□□□ -1.17
IFT20-205ENST00000578009 TXLNAP40222 546 aa7.73□□□□□ -1.17
IFT20-205ENST00000578009 LAMC2Q13753 1193 aa7.73□□□□□ -1.17
IFT20-205ENST00000578009 LRRC69Q6ZNQ3 347 aa7.73□□□□□ -1.17
IFT20-205ENST00000578009 TPSG1Q9NRR2 321 aa7.73□□□□□ -1.17
IFT20-205ENST00000578009 NEUROD4Q9HD90 331 aa7.72□□□□□ -1.17
IFT20-205ENST00000578009 ABCC8Q09428 1581 aa7.71□□□□□ -1.17
IFT20-205ENST00000578009 CFTRP13569 1480 aa7.71□□□□□ -1.18
IFT20-205ENST00000578009 M0R082 166 aa7.71□□□□□ -1.18
IFT20-205ENST00000578009 WASHC4Q2M389 1173 aa7.71□□□□□ -1.18
IFT20-205ENST00000578009 NKAPLQ5M9Q1 402 aa7.71□□□□□ -1.18
IFT20-205ENST00000578009 ZNF417Q8TAU3 575 aa7.71□□□□□ -1.18
IFT20-205ENST00000578009 ZNF587Q96SQ5 575 aaPredicted RBP7.71□□□□□ -1.18
IFT20-205ENST00000578009 PCDHGA11Q9Y5H2 935 aa7.71□□□□□ -1.18
IFT20-205ENST00000578009 BACH1O14867 736 aa7.7□□□□□ -1.18
IFT20-205ENST00000578009 SIN3BO75182 1162 aa7.7□□□□□ -1.18
IFT20-205ENST00000578009 TRIM28Q13263 835 aaKnown RBP7.7□□□□□ -1.18
IFT20-205ENST00000578009 FOXD4L6Q3SYB3 417 aaPredicted RBP7.7□□□□□ -1.18
IFT20-205ENST00000578009 FOXD4L3Q6VB84 417 aaPredicted RBP7.7□□□□□ -1.18
IFT20-205ENST00000578009 ZDHHC1Q8WTX9 485 aa7.7□□□□□ -1.18
IFT20-205ENST00000578009 L3MBTL2Q969R5 705 aa7.7□□□□□ -1.18
IFT20-205ENST00000578009 ZNF232Q9UNY5 417 aa7.7□□□□□ -1.18
IFT20-205ENST00000578009 PIK3CDO00329 1044 aa7.69□□□□□ -1.18
IFT20-205ENST00000578009 PSME1Q06323 249 aa7.69□□□□□ -1.18
IFT20-205ENST00000578009 EML3Q32P44 896 aa7.69□□□□□ -1.18
IFT20-205ENST00000578009 C8orf86Q6ZUL3 223 aa7.69□□□□□ -1.18
IFT20-205ENST00000578009 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.69□□□□□ -1.18
IFT20-205ENST00000578009 SCHIP1Q9P0W5 487 aaPredicted RBP7.69□□□□□ -1.18
IFT20-205ENST00000578009 ADARB2-AS1A8MUL3 147 aa7.68□□□□□ -1.18
IFT20-205ENST00000578009 DYRK3O43781 588 aa7.68□□□□□ -1.18
IFT20-205ENST00000578009 SFSWAPQ12872 951 aaKnown RBP7.68□□□□□ -1.18
IFT20-205ENST00000578009 FAM9AQ8IZU1 332 aaPredicted RBP7.68□□□□□ -1.18
IFT20-205ENST00000578009 NACC1Q96RE7 527 aa7.68□□□□□ -1.18
IFT20-205ENST00000578009 SLC30A3Q99726 388 aa7.68□□□□□ -1.18
IFT20-205ENST00000578009 MDFIQ99750 246 aa7.68□□□□□ -1.18
IFT20-205ENST00000578009 ZNF358Q9NW07 568 aa7.68□□□□□ -1.18
IFT20-205ENST00000578009 NOD1Q9Y239 953 aa7.68□□□□□ -1.18
IFT20-205ENST00000578009 CC2D2AQ9P2K1 1620 aa7.67□□□□□ -1.18
IFT20-205ENST00000578009 ALBP02768 609 aa7.67□□□□□ -1.18
IFT20-205ENST00000578009 NOS2P35228 1153 aa7.67□□□□□ -1.18
IFT20-205ENST00000578009 SOX11P35716 441 aa7.67□□□□□ -1.18
IFT20-205ENST00000578009 GTF2IP78347 998 aa7.67□□□□□ -1.18
IFT20-205ENST00000578009 TEAD4Q15561 434 aa7.67□□□□□ -1.18
IFT20-205ENST00000578009 GRIK4Q16099 956 aa7.67□□□□□ -1.18
IFT20-205ENST00000578009 TBCELQ5QJ74 424 aa7.67□□□□□ -1.18
IFT20-205ENST00000578009 STARD13Q9Y3M8 1113 aa7.67□□□□□ -1.18
IFT20-205ENST00000578009 CADPSQ9ULU8 1353 aa7.67□□□□□ -1.18
IFT20-205ENST00000578009 EML1O00423 815 aa7.66□□□□□ -1.18
IFT20-205ENST00000578009 SKIP12755 728 aa7.66□□□□□ -1.18
IFT20-205ENST00000578009 ADH7P40394 386 aa7.66□□□□□ -1.18
IFT20-205ENST00000578009 COL9A3Q14050 684 aaPredicted RBP7.66□□□□□ -1.18
IFT20-205ENST00000578009 RAB44Q7Z6P3 723 aaPredicted RBP7.66□□□□□ -1.18
IFT20-205ENST00000578009 SLC9A9Q8IVB4 645 aa7.66□□□□□ -1.18
IFT20-205ENST00000578009 MICALL1Q8N3F8 863 aa7.66□□□□□ -1.18
IFT20-205ENST00000578009 ZFP64Q9NPA5 681 aa7.66□□□□□ -1.18
IFT20-205ENST00000578009 SOGA1O94964 1423 aa7.65□□□□□ -1.18
IFT20-205ENST00000578009 SPEM2Q0P670 501 aa7.65□□□□□ -1.18
IFT20-205ENST00000578009 NEUROD1Q13562 356 aa7.65□□□□□ -1.18
IFT20-205ENST00000578009 PRSS36Q5K4E3 855 aa7.65□□□□□ -1.18
IFT20-205ENST00000578009 TNFRSF25Q93038 417 aa7.65□□□□□ -1.18
IFT20-205ENST00000578009 PRDM6Q9NQX0 595 aa7.65□□□□□ -1.18
IFT20-205ENST00000578009 TOP2BQ02880 1626 aa7.64□□□□□ -1.19
IFT20-205ENST00000578009 TRAPPC3LQ5T215 181 aa7.64□□□□□ -1.19
IFT20-205ENST00000578009 ARTNQ5T4W7 220 aa7.64□□□□□ -1.19
IFT20-205ENST00000578009 NBPF11Q86T75 865 aa7.64□□□□□ -1.19
IFT20-205ENST00000578009 TNS4Q8IZW8 715 aa7.64□□□□□ -1.19
IFT20-205ENST00000578009 RHPN1Q8TCX5 695 aa7.64□□□□□ -1.19
IFT20-205ENST00000578009 KRTAP4-7Q9BYR0 210 aa7.64□□□□□ -1.19
IFT20-205ENST00000578009 SYNJ1O43426 1573 aa7.63□□□□□ -1.19
IFT20-205ENST00000578009 TNIKQ9UKE5 1360 aa7.63□□□□□ -1.19
IFT20-205ENST00000578009 SERTM1A2A2V5 107 aa7.63□□□□□ -1.19
IFT20-205ENST00000578009 NID1P14543 1247 aa7.63□□□□□ -1.19
IFT20-205ENST00000578009 SH3PXD2AQ5TCZ1 1133 aa7.63□□□□□ -1.19
IFT20-205ENST00000578009 CEP63Q96MT8 703 aa7.63□□□□□ -1.19
IFT20-205ENST00000578009 GPC6Q9Y625 555 aaPredicted RBP7.63□□□□□ -1.19
IFT20-205ENST00000578009 BIVM-ERCC5R4GMW8 1640 aa7.63□□□□□ -1.19
IFT20-205ENST00000578009 NCOA4Q13772 614 aa7.62□□□□□ -1.19
IFT20-205ENST00000578009 C7orf43Q8WVR3 580 aa7.62□□□□□ -1.19
IFT20-205ENST00000578009 BRD7Q9NPI1 651 aa7.62□□□□□ -1.19
IFT20-205ENST00000578009 C9orf172C9J069 976 aa7.61□□□□□ -1.19
IFT20-205ENST00000578009 LZTS3O60299 673 aaPredicted RBP7.61□□□□□ -1.19
IFT20-205ENST00000578009 EPHA4P54764 986 aa7.61□□□□□ -1.19
IFT20-205ENST00000578009 TBC1D8BQ0IIM8 1120 aa7.61□□□□□ -1.19
IFT20-205ENST00000578009 DEPDC4Q8N2C3 294 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms