RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 RGL2O15211 777 aa28.78■■■□□ 2.2
SMARCD2-206ENST00000577990 PDIA6Q15084 440 aa28.78■■■□□ 2.2
SMARCD2-206ENST00000577990 ZNF652Q9Y2D9 606 aa28.78■■■□□ 2.2
SMARCD2-206ENST00000577990 NRXN2Q9P2S2 1712 aa28.77■■■□□ 2.2
SMARCD2-206ENST00000577990 DPEP1P16444 411 aa28.77■■■□□ 2.2
SMARCD2-206ENST00000577990 TGFB2P61812 414 aa28.77■■■□□ 2.2
SMARCD2-206ENST00000577990 HDGFL1Q5TGJ6 251 aa28.77■■■□□ 2.2
SMARCD2-206ENST00000577990 CLEC4GQ6UXB4 293 aa28.77■■■□□ 2.2
SMARCD2-206ENST00000577990 WDR63Q8IWG1 891 aa28.77■■■□□ 2.2
SMARCD2-206ENST00000577990 SERPINB2P05120 415 aa28.76■■■□□ 2.19
SMARCD2-206ENST00000577990 PROSER3Q2NL68 480 aa28.76■■■□□ 2.19
SMARCD2-206ENST00000577990 TSR2Q969E8 191 aaKnown RBP28.76■■■□□ 2.19
SMARCD2-206ENST00000577990 KIF6Q6ZMV9 814 aa28.75■■■□□ 2.19
SMARCD2-206ENST00000577990 TTLL7Q6ZT98 887 aa28.75■■■□□ 2.19
SMARCD2-206ENST00000577990 LRP10Q7Z4F1 713 aa28.75■■■□□ 2.19
SMARCD2-206ENST00000577990 CARMIL3Q8ND23 1372 aa28.75■■■□□ 2.19
SMARCD2-206ENST00000577990 ANXA1P04083 346 aa28.74■■■□□ 2.19
SMARCD2-206ENST00000577990 SETDB2Q96T68 719 aa28.74■■■□□ 2.19
SMARCD2-206ENST00000577990 DDX21Q9NR30 783 aaKnown RBP eCLIP28.74■■■□□ 2.19
SMARCD2-206ENST00000577990 BCS1LQ9Y276 419 aa28.74■■■□□ 2.19
SMARCD2-206ENST00000577990 ATP10DQ9P241 1426 aa28.74■■■□□ 2.19
SMARCD2-206ENST00000577990 MAP3K15Q6ZN16 1313 aa28.73■■■□□ 2.19
SMARCD2-206ENST00000577990 MIER1Q8N108 512 aa28.73■■■□□ 2.19
SMARCD2-206ENST00000577990 ARFGEF1Q9Y6D6 1849 aa28.73■■■□□ 2.19
SMARCD2-206ENST00000577990 ERVV-1B6SEH8 477 aa28.72■■■□□ 2.19
SMARCD2-206ENST00000577990 C8orf58Q8NAV2 365 aa28.72■■■□□ 2.19
SMARCD2-206ENST00000577990 CHPF2Q9P2E5 772 aa28.72■■■□□ 2.19
SMARCD2-206ENST00000577990 ELL2O00472 640 aaPredicted RBP28.71■■■□□ 2.19
SMARCD2-206ENST00000577990 HLFQ16534 295 aa28.71■■■□□ 2.19
SMARCD2-206ENST00000577990 DBF4Q9UBU7 674 aaPredicted RBP28.7■■■□□ 2.18
SMARCD2-206ENST00000577990 NUP98P52948 1817 aa28.7■■■□□ 2.18
SMARCD2-206ENST00000577990 ADCY9O60503 1353 aa28.7■■■□□ 2.18
SMARCD2-206ENST00000577990 KCNA3P22001 575 aa28.69■■■□□ 2.18
SMARCD2-206ENST00000577990 ZBTB3Q9H5J0 574 aa28.69■■■□□ 2.18
SMARCD2-206ENST00000577990 FANCIQ9NVI1 1328 aa28.69■■■□□ 2.18
SMARCD2-206ENST00000577990 NIP7Q9Y221 180 aaKnown RBP eCLIP28.68■■■□□ 2.18
SMARCD2-206ENST00000577990 CHRNA5P30532 468 aa28.67■■■□□ 2.18
SMARCD2-206ENST00000577990 COPS6Q7L5N1 327 aa28.67■■■□□ 2.18
SMARCD2-206ENST00000577990 TSPYL6Q8N831 410 aa28.67■■■□□ 2.18
SMARCD2-206ENST00000577990 XAGE3Q8WTP9 111 aa28.67■■■□□ 2.18
SMARCD2-206ENST00000577990 PRR5LQ6MZQ0 368 aa28.66■■■□□ 2.18
SMARCD2-206ENST00000577990 ZNF526Q8TF50 670 aaPredicted RBP28.66■■■□□ 2.18
SMARCD2-206ENST00000577990 CHMP4AQ9BY43 222 aa28.66■■■□□ 2.18
SMARCD2-206ENST00000577990 ZNF521Q96K83 1311 aa28.66■■■□□ 2.18
SMARCD2-206ENST00000577990 AIMP1Q12904 312 aaKnown RBP28.65■■■□□ 2.18
SMARCD2-206ENST00000577990 CNBD1Q8NA66 436 aa28.65■■■□□ 2.18
SMARCD2-206ENST00000577990 NPHP1O15259 732 aa28.64■■■□□ 2.18
SMARCD2-206ENST00000577990 C1QTNF8P60827 252 aa28.64■■■□□ 2.18
SMARCD2-206ENST00000577990 GIGYF2Q6Y7W6 1299 aaKnown RBP28.64■■■□□ 2.18
SMARCD2-206ENST00000577990 NBPF5PQ86XG9 351 aaPredicted RBP28.64■■■□□ 2.18
SMARCD2-206ENST00000577990 SPINK5Q9NQ38 1064 aaPredicted RBP28.64■■■□□ 2.18
SMARCD2-206ENST00000577990 HYPKQ9NX55 129 aa28.64■■■□□ 2.18
SMARCD2-206ENST00000577990 DLEC1Q9Y238 1755 aa28.63■■■□□ 2.17
SMARCD2-206ENST00000577990 TWISTNBQ3B726 338 aaPredicted RBP28.63■■■□□ 2.17
SMARCD2-206ENST00000577990 ARHGAP27Q6ZUM4 889 aa28.63■■■□□ 2.17
SMARCD2-206ENST00000577990 PIM2Q9P1W9 311 aa28.63■■■□□ 2.17
SMARCD2-206ENST00000577990 ST5P78524 1137 aa28.62■■■□□ 2.17
SMARCD2-206ENST00000577990 GOLGA2Q08379 1002 aa28.62■■■□□ 2.17
SMARCD2-206ENST00000577990 CCDC30Q5VVM6 783 aa28.62■■■□□ 2.17
SMARCD2-206ENST00000577990 MYH16Q9H6N6 1097 aa28.62■■■□□ 2.17
SMARCD2-206ENST00000577990 ANKRD31Q8N7Z5 1873 aa28.61■■■□□ 2.17
SMARCD2-206ENST00000577990 CCDC24Q8N4L8 307 aa28.6■■■□□ 2.17
SMARCD2-206ENST00000577990 BRIP1Q9BX63 1249 aa28.6■■■□□ 2.17
SMARCD2-206ENST00000577990 GPTP24298 496 aa28.59■■■□□ 2.17
SMARCD2-206ENST00000577990 DALRD3Q5D0E6 543 aaKnown RBP28.59■■■□□ 2.17
SMARCD2-206ENST00000577990 TPTE2Q6XPS3 522 aa28.59■■■□□ 2.17
SMARCD2-206ENST00000577990 ZNF34Q8IZ26 560 aa28.59■■■□□ 2.17
SMARCD2-206ENST00000577990 GPBP1L1Q9HC44 474 aaPredicted RBP28.59■■■□□ 2.17
SMARCD2-206ENST00000577990 FAM177BA6PVY3 158 aa28.58■■■□□ 2.17
SMARCD2-206ENST00000577990 EXOSC9Q06265 439 aaKnown RBP28.58■■■□□ 2.17
SMARCD2-206ENST00000577990 UBN2Q6ZU65 1347 aa28.58■■■□□ 2.17
SMARCD2-206ENST00000577990 ANKRD36CQ5JPF3 1778 aa28.57■■■□□ 2.16
SMARCD2-206ENST00000577990 PDE6BP35913 854 aa28.57■■■□□ 2.16
SMARCD2-206ENST00000577990 HSP90AB3PQ58FF7 597 aa28.57■■■□□ 2.16
SMARCD2-206ENST00000577990 PLBD2Q8NHP8 589 aa28.57■■■□□ 2.16
SMARCD2-206ENST00000577990 ANKRD13DQ6ZTN6 518 aa28.56■■■□□ 2.16
SMARCD2-206ENST00000577990 C2CD5Q86YS7 1000 aa28.56■■■□□ 2.16
SMARCD2-206ENST00000577990 NYXQ9GZU5 481 aa28.56■■■□□ 2.16
SMARCD2-206ENST00000577990 IBTKQ9P2D0 1353 aaPredicted RBP28.56■■■□□ 2.16
SMARCD2-206ENST00000577990 PDZRN3Q9UPQ7 1066 aa28.56■■■□□ 2.16
SMARCD2-206ENST00000577990 SBF1O95248 1867 aa28.55■■■□□ 2.16
SMARCD2-206ENST00000577990 COL11A2P13942 1736 aaPredicted RBP28.55■■■□□ 2.16
SMARCD2-206ENST00000577990 PARP10Q53GL7 1025 aa28.55■■■□□ 2.16
SMARCD2-206ENST00000577990 STK31Q9BXU1 1019 aa28.55■■■□□ 2.16
SMARCD2-206ENST00000577990 PHAXQ9H814 394 aaKnown RBP28.55■■■□□ 2.16
SMARCD2-206ENST00000577990 H0YIN7 160 aa28.54■■■□□ 2.16
SMARCD2-206ENST00000577990 GTF2E1P29083 439 aaPredicted RBP28.53■■■□□ 2.16
SMARCD2-206ENST00000577990 TCIRG1Q13488 830 aa28.53■■■□□ 2.16
SMARCD2-206ENST00000577990 SUSD4Q5VX71 490 aa28.53■■■□□ 2.16
SMARCD2-206ENST00000577990 E9PSI1 815 aa28.52■■■□□ 2.16
SMARCD2-206ENST00000577990 TCERG1O14776 1098 aaKnown RBP28.52■■■□□ 2.16
SMARCD2-206ENST00000577990 VAMP4O75379 141 aa28.52■■■□□ 2.16
SMARCD2-206ENST00000577990 CACNA1SQ13698 1873 aa28.52■■■□□ 2.16
SMARCD2-206ENST00000577990 ARFGEF2Q9Y6D5 1785 aa28.52■■■□□ 2.16
SMARCD2-206ENST00000577990 PPP1R42Q7Z4L9 355 aa28.51■■■□□ 2.15
SMARCD2-206ENST00000577990 NTSR2O95665 410 aa28.5■■■□□ 2.15
SMARCD2-206ENST00000577990 NUTM1Q86Y26 1132 aa28.5■■■□□ 2.15
SMARCD2-206ENST00000577990 ABCC12Q96J65 1359 aa28.5■■■□□ 2.15
SMARCD2-206ENST00000577990 RIC3Q7Z5B4 369 aa28.49■■■□□ 2.15
SMARCD2-206ENST00000577990 CCDC88AQ3V6T2 1871 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms