RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 ZSCAN22P10073 491 aaPredicted RBP17.66■□□□□ 0.42
CUEDC1-206ENST00000577830 CUL4AQ13619 759 aa17.66■□□□□ 0.42
CUEDC1-206ENST00000577830 FBXW7Q969H0 707 aa17.66■□□□□ 0.42
CUEDC1-206ENST00000577830 UBR1Q8IWV7 1749 aa17.66■□□□□ 0.42
CUEDC1-206ENST00000577830 HSPA4P34932 840 aa17.66■□□□□ 0.42
CUEDC1-206ENST00000577830 SGSM2O43147 1006 aa17.65■□□□□ 0.42
CUEDC1-206ENST00000577830 MYL6BP14649 208 aa17.65■□□□□ 0.42
CUEDC1-206ENST00000577830 CKAP2LQ8IYA6 745 aa17.65■□□□□ 0.42
CUEDC1-206ENST00000577830 CDC42BPGQ6DT37 1551 aa17.65■□□□□ 0.42
CUEDC1-206ENST00000577830 FGD1P98174 961 aa17.65■□□□□ 0.42
CUEDC1-206ENST00000577830 PSME1Q06323 249 aa17.65■□□□□ 0.42
CUEDC1-206ENST00000577830 MAP3K2Q9Y2U5 619 aa17.65■□□□□ 0.42
CUEDC1-206ENST00000577830 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.65■□□□□ 0.42
CUEDC1-206ENST00000577830 SETD1BQ9UPS6 1966 aaKnown RBP17.65■□□□□ 0.42
CUEDC1-206ENST00000577830 ANAPC15P60006 121 aa17.64■□□□□ 0.41
CUEDC1-206ENST00000577830 PDLIM2Q96JY6 352 aa17.64■□□□□ 0.41
CUEDC1-206ENST00000577830 FAM227BQ96M60 508 aa17.64■□□□□ 0.41
CUEDC1-206ENST00000577830 ANKRD26Q9UPS8 1709 aa17.64■□□□□ 0.41
CUEDC1-206ENST00000577830 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.64■□□□□ 0.41
CUEDC1-206ENST00000577830 PDCL3Q9H2J4 239 aa17.64■□□□□ 0.41
CUEDC1-206ENST00000577830 PROSER3Q2NL68 480 aa17.63■□□□□ 0.41
CUEDC1-206ENST00000577830 CCDC183Q5T5S1 534 aa17.63■□□□□ 0.41
CUEDC1-206ENST00000577830 EDC3Q96F86 508 aaKnown RBP17.63■□□□□ 0.41
CUEDC1-206ENST00000577830 INTS4Q96HW7 963 aaKnown RBP17.63■□□□□ 0.41
CUEDC1-206ENST00000577830 FSD1Q9BTV5 496 aa17.63■□□□□ 0.41
CUEDC1-206ENST00000577830 CYP46A1Q9Y6A2 500 aa17.63■□□□□ 0.41
CUEDC1-206ENST00000577830 ZKSCAN1P17029 563 aaPredicted RBP17.63■□□□□ 0.41
CUEDC1-206ENST00000577830 CSPP1Q1MSJ5 1256 aa17.63■□□□□ 0.41
CUEDC1-206ENST00000577830 LARP1BQ659C4 914 aaKnown RBP17.63■□□□□ 0.41
CUEDC1-206ENST00000577830 NBPF6Q5VWK0 638 aa17.62■□□□□ 0.41
CUEDC1-206ENST00000577830 SSH3Q8TE77 659 aa17.62■□□□□ 0.41
CUEDC1-206ENST00000577830 NBPF4Q96M43 638 aa17.62■□□□□ 0.41
CUEDC1-206ENST00000577830 SBNO1A3KN83 1393 aa17.62■□□□□ 0.41
CUEDC1-206ENST00000577830 PI4K2BQ8TCG2 481 aa17.62■□□□□ 0.41
CUEDC1-206ENST00000577830 PHF8Q9UPP1 1060 aa17.62■□□□□ 0.41
CUEDC1-206ENST00000577830 RAB11FIP3O75154 756 aa17.62■□□□□ 0.41
CUEDC1-206ENST00000577830 F13A1P00488 732 aa17.62■□□□□ 0.41
CUEDC1-206ENST00000577830 HSP90B1P14625 803 aaKnown RBP17.61■□□□□ 0.41
CUEDC1-206ENST00000577830 COL9A3Q14050 684 aaPredicted RBP17.61■□□□□ 0.41
CUEDC1-206ENST00000577830 CHMP4AQ9BY43 222 aa17.61■□□□□ 0.41
CUEDC1-206ENST00000577830 IGSF1Q8N6C5 1336 aa17.61■□□□□ 0.41
CUEDC1-206ENST00000577830 RAD50Q92878 1312 aa17.61■□□□□ 0.41
CUEDC1-206ENST00000577830 MAP3K5Q99683 1374 aa17.61■□□□□ 0.41
CUEDC1-206ENST00000577830 G3BP1Q13283 466 aaKnown RBP eCLIP17.61■□□□□ 0.41
CUEDC1-206ENST00000577830 STAP2Q9UGK3 403 aa17.61■□□□□ 0.41
CUEDC1-206ENST00000577830 SALL3Q9BXA9 1300 aa17.61■□□□□ 0.41
CUEDC1-206ENST00000577830 C1orf141Q5JVX7 400 aa17.61■□□□□ 0.41
CUEDC1-206ENST00000577830 RUFY2Q8WXA3 655 aa17.61■□□□□ 0.41
CUEDC1-206ENST00000577830 GPATCH3Q96I76 525 aa17.61■□□□□ 0.41
CUEDC1-206ENST00000577830 LSG1Q9H089 658 aaKnown RBP17.61■□□□□ 0.41
CUEDC1-206ENST00000577830 DDX11Q96FC9 970 aa17.6■□□□□ 0.41
CUEDC1-206ENST00000577830 ORAI2Q96SN7 254 aa17.6■□□□□ 0.41
CUEDC1-206ENST00000577830 ZNF500O60304 480 aaPredicted RBP17.6■□□□□ 0.41
CUEDC1-206ENST00000577830 GLRX3O76003 335 aaKnown RBP17.6■□□□□ 0.41
CUEDC1-206ENST00000577830 SLC39A6Q13433 755 aa17.6■□□□□ 0.41
CUEDC1-206ENST00000577830 LRRC2Q9BYS8 371 aa17.6■□□□□ 0.41
CUEDC1-206ENST00000577830 RIMS1Q86UR5 1692 aaKnown RBP17.6■□□□□ 0.41
CUEDC1-206ENST00000577830 ARHGEF10O15013 1369 aa17.6■□□□□ 0.41
CUEDC1-206ENST00000577830 ATP6V1DQ9Y5K8 247 aa17.59■□□□□ 0.41
CUEDC1-206ENST00000577830 RIC3Q7Z5B4 369 aa17.59■□□□□ 0.41
CUEDC1-206ENST00000577830 ECHDC1Q9NTX5 307 aa17.59■□□□□ 0.41
CUEDC1-206ENST00000577830 RBM8AQ9Y5S9 174 aaKnown RBP17.59■□□□□ 0.41
CUEDC1-206ENST00000577830 UBE2HP62256 183 aa17.58■□□□□ 0.41
CUEDC1-206ENST00000577830 HS1BP3Q53T59 392 aa17.58■□□□□ 0.41
CUEDC1-206ENST00000577830 SASS6Q6UVJ0 657 aa17.58■□□□□ 0.41
CUEDC1-206ENST00000577830 DNAJC2Q99543 621 aaKnown RBP17.58■□□□□ 0.41
CUEDC1-206ENST00000577830 CEP170BQ9Y4F5 1589 aaPredicted RBP17.58■□□□□ 0.41
CUEDC1-206ENST00000577830 TLR7Q9NYK1 1049 aaKnown RBP17.58■□□□□ 0.4
CUEDC1-206ENST00000577830 EIF4A1P60842 406 aaKnown RBP17.58■□□□□ 0.4
CUEDC1-206ENST00000577830 NMIQ13287 307 aaPredicted RBP17.58■□□□□ 0.4
CUEDC1-206ENST00000577830 NOLC1Q14978 699 aaKnown RBP eCLIP17.58■□□□□ 0.4
CUEDC1-206ENST00000577830 ME3Q16798 604 aa17.58■□□□□ 0.4
CUEDC1-206ENST00000577830 BICD2Q8TD16 824 aa17.58■□□□□ 0.4
CUEDC1-206ENST00000577830 OVOS2A0A0J9YW53 1432 aa17.57■□□□□ 0.4
CUEDC1-206ENST00000577830 OVOS2Q6IE36 1432 aa17.57■□□□□ 0.4
CUEDC1-206ENST00000577830 TTC21AQ8NDW8 1320 aa17.57■□□□□ 0.4
CUEDC1-206ENST00000577830 BEND3Q5T5X7 828 aa17.57■□□□□ 0.4
CUEDC1-206ENST00000577830 HSP90AB4PQ58FF6 505 aa17.57■□□□□ 0.4
CUEDC1-206ENST00000577830 CHGBP05060 677 aa17.56■□□□□ 0.4
CUEDC1-206ENST00000577830 CDC37L1Q7L3B6 337 aa17.56■□□□□ 0.4
CUEDC1-206ENST00000577830 TAF6LQ9Y6J9 622 aa17.56■□□□□ 0.4
CUEDC1-206ENST00000577830 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.56■□□□□ 0.4
CUEDC1-206ENST00000577830 RPAP1Q9BWH6 1393 aaPredicted RBP17.56■□□□□ 0.4
CUEDC1-206ENST00000577830 DDX17Q92841 729 aaKnown RBP17.55■□□□□ 0.4
CUEDC1-206ENST00000577830 HYPKQ9NX55 129 aa17.55■□□□□ 0.4
CUEDC1-206ENST00000577830 LUZP1Q86V48 1076 aa17.55■□□□□ 0.4
CUEDC1-206ENST00000577830 C3P01024 1663 aa17.55■□□□□ 0.4
CUEDC1-206ENST00000577830 ZC3H6P61129 1189 aaKnown RBP17.54■□□□□ 0.4
CUEDC1-206ENST00000577830 TPCN1Q9ULQ1 816 aa17.54■□□□□ 0.4
CUEDC1-206ENST00000577830 BLOC1S2Q6QNY1 142 aa17.54■□□□□ 0.4
CUEDC1-206ENST00000577830 PROSER2Q86WR7 435 aaPredicted RBP17.54■□□□□ 0.4
CUEDC1-206ENST00000577830 ZNF592Q92610 1267 aa17.54■□□□□ 0.4
CUEDC1-206ENST00000577830 BICC1Q9H694 974 aaKnown RBP17.54■□□□□ 0.4
CUEDC1-206ENST00000577830 MTMR6Q9Y217 621 aa17.54■□□□□ 0.4
CUEDC1-206ENST00000577830 CREB3L3Q68CJ9 461 aa17.54■□□□□ 0.4
CUEDC1-206ENST00000577830 ZNF330Q9Y3S2 320 aaPredicted RBP17.54■□□□□ 0.4
CUEDC1-206ENST00000577830 LIG1P18858 919 aa17.53■□□□□ 0.4
CUEDC1-206ENST00000577830 CCDC129Q6ZRS4 1044 aa17.53■□□□□ 0.4
CUEDC1-206ENST00000577830 EAF2Q96CJ1 260 aaPredicted RBP17.53■□□□□ 0.4
CUEDC1-206ENST00000577830 H3BQV1 296 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms