RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 PDE6BP35913 854 aa16.33■□□□□ 0.2
CSNK1D-206ENST00000577578 C2CD5Q86YS7 1000 aa16.33■□□□□ 0.2
CSNK1D-206ENST00000577578 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
CSNK1D-206ENST00000577578 LRP10Q7Z4F1 713 aa16.32■□□□□ 0.2
CSNK1D-206ENST00000577578 TTLL6Q8N841 843 aa16.32■□□□□ 0.2
CSNK1D-206ENST00000577578 MAP3K15Q6ZN16 1313 aa16.31■□□□□ 0.2
CSNK1D-206ENST00000577578 ZNF316A6NFI3 1004 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-206ENST00000577578 C1QTNF8P60827 252 aa16.31■□□□□ 0.2
CSNK1D-206ENST00000577578 NEUROD2Q15784 382 aa16.31■□□□□ 0.2
CSNK1D-206ENST00000577578 HLFQ16534 295 aa16.31■□□□□ 0.2
CSNK1D-206ENST00000577578 GPBP1L1Q9HC44 474 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-206ENST00000577578 ST5P78524 1137 aa16.3■□□□□ 0.2
CSNK1D-206ENST00000577578 PDIA6Q15084 440 aa16.3■□□□□ 0.2
CSNK1D-206ENST00000577578 NBPF5PQ86XG9 351 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-206ENST00000577578 NIP7Q9Y221 180 aaKnown RBP eCLIP16.3■□□□□ 0.2
CSNK1D-206ENST00000577578 FER1L6Q2WGJ9 1857 aa16.3■□□□□ 0.2
CSNK1D-206ENST00000577578 CACNA1SQ13698 1873 aa16.29■□□□□ 0.2
CSNK1D-206ENST00000577578 KLRG2A4D1S0 409 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-206ENST00000577578 SRGNP10124 158 aa16.29■□□□□ 0.2
CSNK1D-206ENST00000577578 TTLL7Q6ZT98 887 aa16.29■□□□□ 0.2
CSNK1D-206ENST00000577578 CCDC24Q8N4L8 307 aa16.29■□□□□ 0.2
CSNK1D-206ENST00000577578 CCDC88AQ3V6T2 1871 aa16.29■□□□□ 0.2
CSNK1D-206ENST00000577578 SLX4Q8IY92 1834 aa16.29■□□□□ 0.2
CSNK1D-206ENST00000577578 MYL6BP14649 208 aa16.28■□□□□ 0.2
CSNK1D-206ENST00000577578 C9orf131Q5VYM1 1079 aa16.28■□□□□ 0.2
CSNK1D-206ENST00000577578 STYK1Q6J9G0 422 aa16.28■□□□□ 0.2
CSNK1D-206ENST00000577578 TPTE2Q6XPS3 522 aa16.28■□□□□ 0.2
CSNK1D-206ENST00000577578 CFAP44Q96MT7 982 aa16.28■□□□□ 0.2
CSNK1D-206ENST00000577578 IBTKQ9P2D0 1353 aaPredicted RBP16.27■□□□□ 0.2
CSNK1D-206ENST00000577578 APAF1O14727 1248 aa16.27■□□□□ 0.2
CSNK1D-206ENST00000577578 CCDC184Q52MB2 194 aa16.27■□□□□ 0.2
CSNK1D-206ENST00000577578 KIF6Q6ZMV9 814 aa16.27■□□□□ 0.2
CSNK1D-206ENST00000577578 ANKRD36CQ5JPF3 1778 aa16.27■□□□□ 0.2
CSNK1D-206ENST00000577578 ZC3H4Q9UPT8 1303 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-206ENST00000577578 DICER1Q9UPY3 1922 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-206ENST00000577578 NPHP1O15259 732 aa16.26■□□□□ 0.19
CSNK1D-206ENST00000577578 HOXB7P09629 217 aa16.26■□□□□ 0.19
CSNK1D-206ENST00000577578 ZNF853P0CG23 659 aa16.26■□□□□ 0.19
CSNK1D-206ENST00000577578 PROSER3Q2NL68 480 aa16.26■□□□□ 0.19
CSNK1D-206ENST00000577578 NGEFQ8N5V2 710 aa16.26■□□□□ 0.19
CSNK1D-206ENST00000577578 MASTLQ96GX5 879 aa16.26■□□□□ 0.19
CSNK1D-206ENST00000577578 TNRC6CQ9HCJ0 1690 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-206ENST00000577578 RIC1Q4ADV7 1423 aa16.26■□□□□ 0.19
CSNK1D-206ENST00000577578 CEP350Q5VT06 3117 aa16.25■□□□□ 0.19
CSNK1D-206ENST00000577578 NFKBIEO00221 500 aa16.25■□□□□ 0.19
CSNK1D-206ENST00000577578 EIF2S2P20042 333 aaKnown RBP16.25■□□□□ 0.19
CSNK1D-206ENST00000577578 PRELPP51888 382 aa16.25■□□□□ 0.19
CSNK1D-206ENST00000577578 KRT24Q2M2I5 525 aa16.25■□□□□ 0.19
CSNK1D-206ENST00000577578 GIGYF2Q6Y7W6 1299 aaKnown RBP16.25■□□□□ 0.19
CSNK1D-206ENST00000577578 ZNF34Q8IZ26 560 aa16.25■□□□□ 0.19
CSNK1D-206ENST00000577578 ZNF526Q8TF50 670 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-206ENST00000577578 CNKSR1Q969H4 720 aa16.25■□□□□ 0.19
CSNK1D-206ENST00000577578 ZNF622Q969S3 477 aaKnown RBP eCLIP16.25■□□□□ 0.19
CSNK1D-206ENST00000577578 UBN2Q6ZU65 1347 aa16.24■□□□□ 0.19
CSNK1D-206ENST00000577578 KIF3CO14782 793 aa16.24■□□□□ 0.19
CSNK1D-206ENST00000577578 LMNB1P20700 586 aa16.24■□□□□ 0.19
CSNK1D-206ENST00000577578 NYXQ9GZU5 481 aa16.24■□□□□ 0.19
CSNK1D-206ENST00000577578 ZBTB3Q9H5J0 574 aa16.24■□□□□ 0.19
CSNK1D-206ENST00000577578 DDX21Q9NR30 783 aaKnown RBP eCLIP16.24■□□□□ 0.19
CSNK1D-206ENST00000577578 RNF181Q9P0P0 153 aa16.24■□□□□ 0.19
CSNK1D-206ENST00000577578 TIAM2Q8IVF5 1701 aa16.24■□□□□ 0.19
CSNK1D-206ENST00000577578 NPR1P16066 1061 aa16.23■□□□□ 0.19
CSNK1D-206ENST00000577578 RASSF7Q02833 373 aa16.23■□□□□ 0.19
CSNK1D-206ENST00000577578 CALD1Q05682 793 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-206ENST00000577578 CRY2Q49AN0 593 aa16.23■□□□□ 0.19
CSNK1D-206ENST00000577578 PRPF40BQ6NWY9 871 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-206ENST00000577578 C7orf43Q8WVR3 580 aa16.23■□□□□ 0.19
CSNK1D-206ENST00000577578 MBIPQ9NS73 344 aa16.23■□□□□ 0.19
CSNK1D-206ENST00000577578 IFT57Q9NWB7 429 aa16.23■□□□□ 0.19
CSNK1D-206ENST00000577578 ABCC12Q96J65 1359 aa16.23■□□□□ 0.19
CSNK1D-206ENST00000577578 LTBP3Q9NS15 1303 aa16.22■□□□□ 0.19
CSNK1D-206ENST00000577578 C21orf2O43822 256 aa16.22■□□□□ 0.19
CSNK1D-206ENST00000577578 ANXA1P04083 346 aa16.22■□□□□ 0.19
CSNK1D-206ENST00000577578 LAS1LQ9Y4W2 734 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-206ENST00000577578 GPTP24298 496 aa16.21■□□□□ 0.19
CSNK1D-206ENST00000577578 PARP10Q53GL7 1025 aa16.21■□□□□ 0.19
CSNK1D-206ENST00000577578 SOGA3Q5TF21 947 aa16.21■□□□□ 0.19
CSNK1D-206ENST00000577578 SUSD4Q5VX71 490 aa16.21■□□□□ 0.19
CSNK1D-206ENST00000577578 FAM177BA6PVY3 158 aa16.2■□□□□ 0.18
CSNK1D-206ENST00000577578 ANP32CO43423 234 aa16.2■□□□□ 0.18
CSNK1D-206ENST00000577578 NTSR2O95665 410 aa16.2■□□□□ 0.18
CSNK1D-206ENST00000577578 GNAI1P63096 354 aa16.2■□□□□ 0.18
CSNK1D-206ENST00000577578 CCDC27Q2M243 656 aa16.2■□□□□ 0.18
CSNK1D-206ENST00000577578 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-206ENST00000577578 HDGFL1Q5TGJ6 251 aa16.2■□□□□ 0.18
CSNK1D-206ENST00000577578 COPS6Q7L5N1 327 aa16.2■□□□□ 0.18
CSNK1D-206ENST00000577578 NUTM1Q86Y26 1132 aa16.2■□□□□ 0.18
CSNK1D-206ENST00000577578 CHPF2Q9P2E5 772 aa16.2■□□□□ 0.18
CSNK1D-206ENST00000577578 RNF123Q5XPI4 1314 aa16.19■□□□□ 0.18
CSNK1D-206ENST00000577578 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
CSNK1D-206ENST00000577578 GTF2E1P29083 439 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-206ENST00000577578 ERFEQ4G0M1 354 aa16.19■□□□□ 0.18
CSNK1D-206ENST00000577578 DUSP27Q5VZP5 1158 aa16.19■□□□□ 0.18
CSNK1D-206ENST00000577578 XAGE3Q8WTP9 111 aa16.19■□□□□ 0.18
CSNK1D-206ENST00000577578 NECTIN2Q92692 538 aa16.19■□□□□ 0.18
CSNK1D-206ENST00000577578 NMRK2Q9NPI5 230 aa16.19■□□□□ 0.18
CSNK1D-206ENST00000577578 DBF4Q9UBU7 674 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-206ENST00000577578 HOXA10P31260 410 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-206ENST00000577578 HSP90AB3PQ58FF7 597 aa16.18■□□□□ 0.18
CSNK1D-206ENST00000577578 TAOK3Q9H2K8 898 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms