RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 C22orf23Q9BZE7 217 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 CFAP74Q9C0B2 1584 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 NEXMIFQ5QGS0 1516 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 IQSEC2Q5JU85 1478 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 PPLO60437 1756 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 SSFA2P28290 1259 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 DCTN1Q14203 1278 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 DESI1Q6ICB0 168 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 MYO3AQ8NEV4 1616 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 IFT172Q9UG01 1749 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 PTPREP23469 700 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 PSEN2P49810 448 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 NFE2L2Q16236 605 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 TBC1D32Q96NH3 1257 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 SLC4A5Q9BY07 1137 aa6.69□□□□□ -1.34
VAPA-203ENST00000577539 CALD1Q05682 793 aaKnown RBP6.68□□□□□ -1.34
VAPA-203ENST00000577539 TSPYL6Q8N831 410 aa6.68□□□□□ -1.34
VAPA-203ENST00000577539 NUDT16Q96DE0 195 aaKnown RBP6.68□□□□□ -1.34
VAPA-203ENST00000577539 CAMSAP1Q5T5Y3 1602 aa6.68□□□□□ -1.34
VAPA-203ENST00000577539 IL16Q14005 1332 aa6.68□□□□□ -1.34
VAPA-203ENST00000577539 FAM83GA6ND36 823 aa6.68□□□□□ -1.34
VAPA-203ENST00000577539 WASLO00401 505 aaPredicted RBP6.68□□□□□ -1.34
VAPA-203ENST00000577539 VRTNQ9H8Y1 702 aa6.68□□□□□ -1.34
VAPA-203ENST00000577539 ARHGAP31Q2M1Z3 1444 aa6.68□□□□□ -1.34
VAPA-203ENST00000577539 HSP90AA1P07900 732 aaKnown RBP6.68□□□□□ -1.34
VAPA-203ENST00000577539 GNAI1P63096 354 aa6.68□□□□□ -1.34
VAPA-203ENST00000577539 PPP4R3BQ5MIZ7 849 aa6.68□□□□□ -1.34
VAPA-203ENST00000577539 DIP2CQ9Y2E4 1556 aa6.68□□□□□ -1.34
VAPA-203ENST00000577539 TWISTNBQ3B726 338 aaPredicted RBP6.67□□□□□ -1.34
VAPA-203ENST00000577539 HSCBQ8IWL3 235 aa6.67□□□□□ -1.34
VAPA-203ENST00000577539 ZBTB40Q9NUA8 1239 aa6.67□□□□□ -1.34
VAPA-203ENST00000577539 HDAC1Q13547 482 aaPredicted RBP6.67□□□□□ -1.34
VAPA-203ENST00000577539 MORN1Q5T089 497 aa6.67□□□□□ -1.34
VAPA-203ENST00000577539 SLF2Q8IX21 1173 aa6.67□□□□□ -1.34
VAPA-203ENST00000577539 PTK7Q13308 1070 aa6.67□□□□□ -1.34
VAPA-203ENST00000577539 ZFYVE9O95405 1425 aa6.67□□□□□ -1.34
VAPA-203ENST00000577539 RIMS2Q9UQ26 1411 aa6.67□□□□□ -1.34
VAPA-203ENST00000577539 SHPRHQ149N8 1683 aa6.67□□□□□ -1.34
VAPA-203ENST00000577539 HDGFP51858 240 aaKnown RBP6.66□□□□□ -1.34
VAPA-203ENST00000577539 DOK7Q18PE1 504 aa6.66□□□□□ -1.34
VAPA-203ENST00000577539 ALDH1L2Q3SY69 923 aa6.66□□□□□ -1.34
VAPA-203ENST00000577539 LYPD8Q6UX82 237 aa6.66□□□□□ -1.34
VAPA-203ENST00000577539 MBIPQ9NS73 344 aa6.66□□□□□ -1.34
VAPA-203ENST00000577539 PIK3C2BO00750 1634 aa6.66□□□□□ -1.34
VAPA-203ENST00000577539 VAMP4O75379 141 aa6.66□□□□□ -1.34
VAPA-203ENST00000577539 SULT6B1Q6IMI4 303 aa6.66□□□□□ -1.34
VAPA-203ENST00000577539 CHD1LQ86WJ1 897 aa6.66□□□□□ -1.34
VAPA-203ENST00000577539 PLEKHM2Q8IWE5 1019 aa6.66□□□□□ -1.34
VAPA-203ENST00000577539 SMC5Q8IY18 1101 aa6.66□□□□□ -1.34
VAPA-203ENST00000577539 SIGLEC1Q9BZZ2 1709 aa6.66□□□□□ -1.34
VAPA-203ENST00000577539 PTPRMP28827 1452 aa6.66□□□□□ -1.34
VAPA-203ENST00000577539 NUTM2BA6NNL0 878 aaPredicted RBP6.66□□□□□ -1.34
VAPA-203ENST00000577539 NUTM2EB1AL46 878 aaPredicted RBP6.66□□□□□ -1.34
VAPA-203ENST00000577539 LMOD3Q0VAK6 560 aa6.66□□□□□ -1.34
VAPA-203ENST00000577539 TRAF7Q6Q0C0 670 aa6.66□□□□□ -1.34
VAPA-203ENST00000577539 NUTM2AQ8IVF1 878 aaPredicted RBP6.66□□□□□ -1.34
VAPA-203ENST00000577539 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.66□□□□□ -1.34
VAPA-203ENST00000577539 CHMP4BQ9H444 224 aaKnown RBP6.66□□□□□ -1.34
VAPA-203ENST00000577539 HSP90AB1P08238 724 aaKnown RBP6.65□□□□□ -1.34
VAPA-203ENST00000577539 TSGA10IPQ3SY00 556 aa6.65□□□□□ -1.34
VAPA-203ENST00000577539 C8orf58Q8NAV2 365 aa6.65□□□□□ -1.34
VAPA-203ENST00000577539 ARHGEF28Q8N1W1 1705 aaKnown RBP6.65□□□□□ -1.34
VAPA-203ENST00000577539 PPIP5K1Q6PFW1 1433 aa6.65□□□□□ -1.34
VAPA-203ENST00000577539 ZC3H13Q5T200 1668 aaKnown RBP6.65□□□□□ -1.35
VAPA-203ENST00000577539 POTEB3A0JP26 581 aa6.65□□□□□ -1.35
VAPA-203ENST00000577539 IL13P35225 146 aa6.65□□□□□ -1.35
VAPA-203ENST00000577539 POTEBQ6S5H4 581 aa6.65□□□□□ -1.35
VAPA-203ENST00000577539 MRPL50Q8N5N7 158 aaKnown RBP6.65□□□□□ -1.35
VAPA-203ENST00000577539 NFATC2IPQ8NCF5 419 aa6.65□□□□□ -1.35
VAPA-203ENST00000577539 SLC26A8Q96RN1 970 aa6.65□□□□□ -1.35
VAPA-203ENST00000577539 RABGEF1Q9UJ41 708 aa6.65□□□□□ -1.35
VAPA-203ENST00000577539 KRT24Q2M2I5 525 aa6.64□□□□□ -1.35
VAPA-203ENST00000577539 BLOC1S3Q6QNY0 202 aa6.64□□□□□ -1.35
VAPA-203ENST00000577539 RNF19BQ6ZMZ0 732 aa6.64□□□□□ -1.35
VAPA-203ENST00000577539 RDH13Q8NBN7 331 aa6.64□□□□□ -1.35
VAPA-203ENST00000577539 IFT57Q9NWB7 429 aa6.64□□□□□ -1.35
VAPA-203ENST00000577539 NUCB1Q02818 461 aa6.64□□□□□ -1.35
VAPA-203ENST00000577539 MCM10Q7L590 875 aa6.64□□□□□ -1.35
VAPA-203ENST00000577539 CCDC125Q86Z20 511 aa6.64□□□□□ -1.35
VAPA-203ENST00000577539 API5Q9BZZ5 524 aaKnown RBP6.64□□□□□ -1.35
VAPA-203ENST00000577539 METP08581 1390 aa6.64□□□□□ -1.35
VAPA-203ENST00000577539 CLDN10P78369 228 aa6.64□□□□□ -1.35
VAPA-203ENST00000577539 OCLNQ16625 522 aa6.64□□□□□ -1.35
VAPA-203ENST00000577539 SLC27A5Q9Y2P5 690 aa6.64□□□□□ -1.35
VAPA-203ENST00000577539 CD163L1Q9NR16 1453 aa6.64□□□□□ -1.35
VAPA-203ENST00000577539 ALKQ9UM73 1620 aa6.64□□□□□ -1.35
VAPA-203ENST00000577539 ZBTB7BO15156 539 aaPredicted RBP6.63□□□□□ -1.35
VAPA-203ENST00000577539 SLC4A10Q6U841 1118 aa6.63□□□□□ -1.35
VAPA-203ENST00000577539 PACS2Q86VP3 889 aa6.63□□□□□ -1.35
VAPA-203ENST00000577539 KCNK17Q96T54 332 aa6.63□□□□□ -1.35
VAPA-203ENST00000577539 CHMP5Q9NZZ3 219 aa6.63□□□□□ -1.35
VAPA-203ENST00000577539 PNPLA6Q8IY17 1366 aa6.63□□□□□ -1.35
VAPA-203ENST00000577539 ARHGEF40Q8TER5 1519 aa6.63□□□□□ -1.35
VAPA-203ENST00000577539 LDLRAD1Q5T700 205 aa6.63□□□□□ -1.35
VAPA-203ENST00000577539 MIS18AQ9NYP9 233 aa6.63□□□□□ -1.35
VAPA-203ENST00000577539 SEPT9Q9UHD8 586 aaPredicted RBP6.63□□□□□ -1.35
VAPA-203ENST00000577539 COL3A1P02461 1466 aaPredicted RBP6.62□□□□□ -1.35
VAPA-203ENST00000577539 SOX11P35716 441 aa6.62□□□□□ -1.35
VAPA-203ENST00000577539 CEBPAP49715 358 aaPredicted RBP6.62□□□□□ -1.35
VAPA-203ENST00000577539 HSP90AB2PQ58FF8 381 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms