RNA–Protein interactions for RNA: ENST00000577310.1

SNX11-204, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-204ENST00000577310 POLR2AP24928 1970 aaKnown RBP8.61□□□□□ -1.03
SNX11-204ENST00000577310 RTL1A6NKG5 1358 aa8.61□□□□□ -1.03
SNX11-204ENST00000577310 FAM155AB1AL88 458 aaPredicted RBP8.6□□□□□ -1.03
SNX11-204ENST00000577310 CRKLP46109 303 aaKnown RBP8.6□□□□□ -1.03
SNX11-204ENST00000577310 KIF23Q02241 960 aaPredicted RBP8.6□□□□□ -1.03
SNX11-204ENST00000577310 REM2Q8IYK8 340 aaPredicted RBP8.6□□□□□ -1.03
SNX11-204ENST00000577310 CCDC102AQ96A19 550 aa8.6□□□□□ -1.03
SNX11-204ENST00000577310 BRIP1Q9BX63 1249 aa8.6□□□□□ -1.03
SNX11-204ENST00000577310 HDAC9Q9UKV0 1011 aa8.6□□□□□ -1.03
SNX11-204ENST00000577310 SPG7Q9UQ90 795 aa8.6□□□□□ -1.03
SNX11-204ENST00000577310 EDC4Q6P2E9 1401 aaKnown RBP8.6□□□□□ -1.03
SNX11-204ENST00000577310 CARMIL3Q8ND23 1372 aa8.6□□□□□ -1.03
SNX11-204ENST00000577310 FKBP4Q02790 459 aaKnown RBP eCLIP8.59□□□□□ -1.03
SNX11-204ENST00000577310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.59□□□□□ -1.03
SNX11-204ENST00000577310 NARFQ9UHQ1 456 aa8.59□□□□□ -1.03
SNX11-204ENST00000577310 TTC28Q96AY4 2481 aa8.59□□□□□ -1.03
SNX11-204ENST00000577310 TJP1Q07157 1748 aa8.58□□□□□ -1.04
SNX11-204ENST00000577310 POTEFA5A3E0 1075 aa8.58□□□□□ -1.04
SNX11-204ENST00000577310 HUNKP57058 714 aa8.58□□□□□ -1.04
SNX11-204ENST00000577310 CCDC93Q567U6 631 aa8.58□□□□□ -1.04
SNX11-204ENST00000577310 STYK1Q6J9G0 422 aa8.58□□□□□ -1.04
SNX11-204ENST00000577310 RGMBQ6NW40 437 aa8.58□□□□□ -1.04
SNX11-204ENST00000577310 PRPF40BQ6NWY9 871 aaKnown RBP8.58□□□□□ -1.04
SNX11-204ENST00000577310 SYNE4Q8N205 404 aa8.58□□□□□ -1.04
SNX11-204ENST00000577310 PRUNE2Q8WUY3 3088 aa8.57□□□□□ -1.04
SNX11-204ENST00000577310 ERVV-2B6SEH9 535 aa8.57□□□□□ -1.04
SNX11-204ENST00000577310 H0YGN5 161 aa8.57□□□□□ -1.04
SNX11-204ENST00000577310 EPS15P42566 896 aa8.57□□□□□ -1.04
SNX11-204ENST00000577310 SCNN1DP51172 638 aa8.57□□□□□ -1.04
SNX11-204ENST00000577310 INTS5Q6P9B9 1019 aaKnown RBP8.57□□□□□ -1.04
SNX11-204ENST00000577310 HDGFL2Q7Z4V5 671 aaPredicted RBP8.57□□□□□ -1.04
SNX11-204ENST00000577310 IFNL2Q8IZJ0 200 aa8.57□□□□□ -1.04
SNX11-204ENST00000577310 C7orf43Q8WVR3 580 aa8.57□□□□□ -1.04
SNX11-204ENST00000577310 CSRNP1Q96S65 589 aa8.57□□□□□ -1.04
SNX11-204ENST00000577310 ZNF277Q9NRM2 450 aaPredicted RBP8.57□□□□□ -1.04
SNX11-204ENST00000577310 PGAP2Q9UHJ9 254 aa8.57□□□□□ -1.04
SNX11-204ENST00000577310 EYSQ5T1H1 3165 aa8.57□□□□□ -1.04
SNX11-204ENST00000577310 LAMA2P24043 3122 aaKnown RBP8.56□□□□□ -1.04
SNX11-204ENST00000577310 PHKG2P15735 406 aa8.56□□□□□ -1.04
SNX11-204ENST00000577310 IARSP41252 1262 aaKnown RBP8.56□□□□□ -1.04
SNX11-204ENST00000577310 EIF6P56537 245 aaKnown RBP8.56□□□□□ -1.04
SNX11-204ENST00000577310 NOM1Q5C9Z4 860 aaKnown RBP8.56□□□□□ -1.04
SNX11-204ENST00000577310 CHRDL2Q6WN34 429 aa8.56□□□□□ -1.04
SNX11-204ENST00000577310 RTKN2Q8IZC4 609 aa8.56□□□□□ -1.04
SNX11-204ENST00000577310 ZNF296Q8WUU4 475 aaPredicted RBP8.56□□□□□ -1.04
SNX11-204ENST00000577310 GLIS2Q9BZE0 524 aaPredicted RBP8.56□□□□□ -1.04
SNX11-204ENST00000577310 RBM27Q9P2N5 1060 aaKnown RBP8.56□□□□□ -1.04
SNX11-204ENST00000577310 GJA3Q9Y6H8 435 aa8.56□□□□□ -1.04
SNX11-204ENST00000577310 SRGNP10124 158 aa8.55□□□□□ -1.04
SNX11-204ENST00000577310 CDC37L1Q7L3B6 337 aa8.55□□□□□ -1.04
SNX11-204ENST00000577310 ZC3H15Q8WU90 426 aaKnown RBP8.55□□□□□ -1.04
SNX11-204ENST00000577310 JDP2Q8WYK2 163 aa8.55□□□□□ -1.04
SNX11-204ENST00000577310 MASTLQ96GX5 879 aa8.55□□□□□ -1.04
SNX11-204ENST00000577310 COG3Q96JB2 828 aa8.55□□□□□ -1.04
SNX11-204ENST00000577310 ZNF408Q9H9D4 720 aa8.55□□□□□ -1.04
SNX11-204ENST00000577310 BCL2L12Q9HB09 334 aa8.55□□□□□ -1.04
SNX11-204ENST00000577310 ADARB2Q9NS39 739 aaKnown RBP8.55□□□□□ -1.04
SNX11-204ENST00000577310 CACNA1AO00555 2505 aa8.55□□□□□ -1.04
SNX11-204ENST00000577310 SOS1Q07889 1333 aaPredicted RBP8.54□□□□□ -1.04
SNX11-204ENST00000577310 COL9A1P20849 921 aa8.54□□□□□ -1.04
SNX11-204ENST00000577310 FBLN1P23142 703 aa8.54□□□□□ -1.04
SNX11-204ENST00000577310 ANKRD13DQ6ZTN6 518 aa8.54□□□□□ -1.04
SNX11-204ENST00000577310 POTEDQ86YR6 584 aa8.54□□□□□ -1.04
SNX11-204ENST00000577310 NCAPD2Q15021 1401 aa8.54□□□□□ -1.04
SNX11-204ENST00000577310 A0A1W2PP64 1363 aa8.53□□□□□ -1.04
SNX11-204ENST00000577310 PLA2G5P39877 138 aa8.53□□□□□ -1.04
SNX11-204ENST00000577310 ZNF157P51786 506 aaPredicted RBP8.53□□□□□ -1.04
SNX11-204ENST00000577310 PRR5LQ6MZQ0 368 aa8.53□□□□□ -1.04
SNX11-204ENST00000577310 TERF2IPQ9NYB0 399 aa8.53□□□□□ -1.04
SNX11-204ENST00000577310 ANKRD26Q9UPS8 1709 aa8.53□□□□□ -1.04
SNX11-204ENST00000577310 LAMB4A4D0S4 1761 aa8.53□□□□□ -1.04
SNX11-204ENST00000577310 TONSLQ96HA7 1378 aa8.52□□□□□ -1.05
SNX11-204ENST00000577310 A0A1W2PPC1 479 aa8.52□□□□□ -1.05
SNX11-204ENST00000577310 PTCD1O75127 700 aaKnown RBP8.52□□□□□ -1.05
SNX11-204ENST00000577310 SLC10A3P09131 477 aa8.52□□□□□ -1.05
SNX11-204ENST00000577310 EN2P19622 333 aaPredicted RBP8.52□□□□□ -1.05
SNX11-204ENST00000577310 HSP90AB2PQ58FF8 381 aa8.52□□□□□ -1.05
SNX11-204ENST00000577310 PRO3102Q9H379 93 aa8.52□□□□□ -1.05
SNX11-204ENST00000577310 STXBP5LQ9Y2K9 1186 aa8.52□□□□□ -1.05
SNX11-204ENST00000577310 COL15A1P39059 1388 aa8.51□□□□□ -1.05
SNX11-204ENST00000577310 KIF24Q5T7B8 1368 aa8.51□□□□□ -1.05
SNX11-204ENST00000577310 GPR25O00155 361 aa8.51□□□□□ -1.05
SNX11-204ENST00000577310 RRS1Q15050 365 aaKnown RBP8.51□□□□□ -1.05
SNX11-204ENST00000577310 GPR153Q6NV75 609 aa8.51□□□□□ -1.05
SNX11-204ENST00000577310 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.51□□□□□ -1.05
SNX11-204ENST00000577310 C2orf69Q8N8R5 385 aa8.51□□□□□ -1.05
SNX11-204ENST00000577310 GPRC5DQ9NZD1 345 aa8.51□□□□□ -1.05
SNX11-204ENST00000577310 PIEZO1Q92508 2521 aa8.51□□□□□ -1.05
SNX11-204ENST00000577310 ERBB4Q15303 1308 aa8.51□□□□□ -1.05
SNX11-204ENST00000577310 HSP90AB1P08238 724 aaKnown RBP8.5□□□□□ -1.05
SNX11-204ENST00000577310 HOXD11P31277 338 aaPredicted RBP8.5□□□□□ -1.05
SNX11-204ENST00000577310 TMC1Q8TDI8 760 aa8.5□□□□□ -1.05
SNX11-204ENST00000577310 PSMD1Q99460 953 aa8.5□□□□□ -1.05
SNX11-204ENST00000577310 SLC12A5Q9H2X9 1139 aa8.5□□□□□ -1.05
SNX11-204ENST00000577310 GBA2Q9HCG7 927 aaPredicted RBP8.5□□□□□ -1.05
SNX11-204ENST00000577310 FLT4P35916 1363 aa8.49□□□□□ -1.05
SNX11-204ENST00000577310 FKTNO75072 461 aa8.49□□□□□ -1.05
SNX11-204ENST00000577310 TBC1D8O95759 1140 aa8.49□□□□□ -1.05
SNX11-204ENST00000577310 CABP4P57796 275 aa8.49□□□□□ -1.05
SNX11-204ENST00000577310 FAM122AQ96E09 287 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms