RNA–Protein interactions for RNA: ENST00000575154.1

RFWD3-209, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 3

Gene RFWD3, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-209ENST00000575154 PDRG1Q9NUG6 133 aa12.96□□□□□ -0.33
RFWD3-209ENST00000575154 KIF3AQ9Y496 699 aa12.96□□□□□ -0.33
RFWD3-209ENST00000575154 CEP170BQ9Y4F5 1589 aaPredicted RBP12.95□□□□□ -0.34
RFWD3-209ENST00000575154 IFIT2P09913 472 aaKnown RBP12.95□□□□□ -0.34
RFWD3-209ENST00000575154 SYT1P21579 422 aa12.95□□□□□ -0.34
RFWD3-209ENST00000575154 AKAP4Q5JQC9 854 aa12.95□□□□□ -0.34
RFWD3-209ENST00000575154 DNTTIP2Q5QJE6 756 aaKnown RBP12.95□□□□□ -0.34
RFWD3-209ENST00000575154 BEND3Q5T5X7 828 aa12.95□□□□□ -0.34
RFWD3-209ENST00000575154 CYB5RLQ6IPT4 315 aa12.95□□□□□ -0.34
RFWD3-209ENST00000575154 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.95□□□□□ -0.34
RFWD3-209ENST00000575154 IL17REQ8NFR9 667 aa12.95□□□□□ -0.34
RFWD3-209ENST00000575154 IP6K1Q92551 441 aa12.95□□□□□ -0.34
RFWD3-209ENST00000575154 DDX19AQ9NUU7 478 aaKnown RBP12.95□□□□□ -0.34
RFWD3-209ENST00000575154 HYPKQ9NX55 129 aa12.95□□□□□ -0.34
RFWD3-209ENST00000575154 MED1Q15648 1581 aaPredicted RBP12.94□□□□□ -0.34
RFWD3-209ENST00000575154 FOXO3O43524 673 aa12.94□□□□□ -0.34
RFWD3-209ENST00000575154 AK2P54819 239 aa12.94□□□□□ -0.34
RFWD3-209ENST00000575154 EIF4A1P60842 406 aaKnown RBP12.94□□□□□ -0.34
RFWD3-209ENST00000575154 XPCQ01831 940 aaPredicted RBP12.94□□□□□ -0.34
RFWD3-209ENST00000575154 ATL3Q6DD88 541 aa12.94□□□□□ -0.34
RFWD3-209ENST00000575154 UPF3BQ9BZI7 483 aaKnown RBP12.94□□□□□ -0.34
RFWD3-209ENST00000575154 MIS18AQ9NYP9 233 aa12.94□□□□□ -0.34
RFWD3-209ENST00000575154 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
RFWD3-209ENST00000575154 GIGYF1O75420 1035 aaPredicted RBP12.93□□□□□ -0.34
RFWD3-209ENST00000575154 ADCY5O95622 1261 aa12.93□□□□□ -0.34
RFWD3-209ENST00000575154 TEFQ10587 303 aa12.93□□□□□ -0.34
RFWD3-209ENST00000575154 NOLC1Q14978 699 aaKnown RBP eCLIP12.93□□□□□ -0.34
RFWD3-209ENST00000575154 TSGA10IPQ3SY00 556 aa12.93□□□□□ -0.34
RFWD3-209ENST00000575154 RUFY3Q7L099 469 aa12.93□□□□□ -0.34
RFWD3-209ENST00000575154 SMAP1Q8IYB5 467 aaPredicted RBP12.93□□□□□ -0.34
RFWD3-209ENST00000575154 VSIG10Q8N0Z9 540 aa12.93□□□□□ -0.34
RFWD3-209ENST00000575154 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.93□□□□□ -0.34
RFWD3-209ENST00000575154 GOLGA6L4A6NEF3 574 aa12.92□□□□□ -0.34
RFWD3-209ENST00000575154 NEMFO60524 1076 aa12.92□□□□□ -0.34
RFWD3-209ENST00000575154 CASTP20810 708 aaKnown RBP12.92□□□□□ -0.34
RFWD3-209ENST00000575154 NWD1Q149M9 1564 aa12.92□□□□□ -0.34
RFWD3-209ENST00000575154 SYCP1Q15431 976 aa12.92□□□□□ -0.34
RFWD3-209ENST00000575154 MAP3K11Q16584 847 aa12.92□□□□□ -0.34
RFWD3-209ENST00000575154 RNF214Q8ND24 703 aa12.92□□□□□ -0.34
RFWD3-209ENST00000575154 FAM200AQ8TCP9 573 aa12.92□□□□□ -0.34
RFWD3-209ENST00000575154 PIK3C2AO00443 1686 aa12.92□□□□□ -0.34
RFWD3-209ENST00000575154 UTYO14607 1347 aa12.91□□□□□ -0.34
RFWD3-209ENST00000575154 NPHP3Q7Z494 1330 aa12.91□□□□□ -0.34
RFWD3-209ENST00000575154 CTAGE5O15320 804 aa12.91□□□□□ -0.34
RFWD3-209ENST00000575154 GJB2P29033 226 aa12.91□□□□□ -0.34
RFWD3-209ENST00000575154 KCNJ4P48050 445 aa12.91□□□□□ -0.34
RFWD3-209ENST00000575154 G3BP1Q13283 466 aaKnown RBP eCLIP12.91□□□□□ -0.34
RFWD3-209ENST00000575154 KSR2Q6VAB6 950 aa12.91□□□□□ -0.34
RFWD3-209ENST00000575154 NUTM1Q86Y26 1132 aa12.91□□□□□ -0.34
RFWD3-209ENST00000575154 LINS1Q8NG48 757 aa12.91□□□□□ -0.34
RFWD3-209ENST00000575154 IL1RAPL2Q9NP60 686 aa12.91□□□□□ -0.34
RFWD3-209ENST00000575154 C9orf78Q9NZ63 289 aaPredicted RBP12.91□□□□□ -0.34
RFWD3-209ENST00000575154 HMGB1P09429 215 aaKnown RBP12.9□□□□□ -0.34
RFWD3-209ENST00000575154 LTKP29376 864 aa12.9□□□□□ -0.34
RFWD3-209ENST00000575154 NECTIN1Q15223 517 aa12.9□□□□□ -0.34
RFWD3-209ENST00000575154 C1orf141Q5JVX7 400 aa12.9□□□□□ -0.34
RFWD3-209ENST00000575154 FOXD4L5Q5VV16 416 aaPredicted RBP12.9□□□□□ -0.34
RFWD3-209ENST00000575154 UNC5CLQ8IV45 518 aa12.9□□□□□ -0.34
RFWD3-209ENST00000575154 PDCL2Q8N4E4 241 aa12.9□□□□□ -0.34
RFWD3-209ENST00000575154 ABTB2Q8N961 1025 aa12.9□□□□□ -0.34
RFWD3-209ENST00000575154 FOXD4L4Q8WXT5 416 aaPredicted RBP12.9□□□□□ -0.34
RFWD3-209ENST00000575154 MAP4K1Q92918 833 aa12.9□□□□□ -0.34
RFWD3-209ENST00000575154 JAKMIP1Q96N16 626 aaKnown RBP12.9□□□□□ -0.34
RFWD3-209ENST00000575154 FUCA2Q9BTY2 467 aa12.9□□□□□ -0.34
RFWD3-209ENST00000575154 ZSCAN16Q9H4T2 348 aaPredicted RBP12.9□□□□□ -0.34
RFWD3-209ENST00000575154 FAM13BQ9NYF5 915 aa12.9□□□□□ -0.34
RFWD3-209ENST00000575154 NSFL1CQ9UNZ2 370 aaKnown RBP12.9□□□□□ -0.34
RFWD3-209ENST00000575154 MTMR6Q9Y217 621 aa12.9□□□□□ -0.34
RFWD3-209ENST00000575154 PHRF1Q9P1Y6 1649 aaKnown RBP12.89□□□□□ -0.35
RFWD3-209ENST00000575154 BLOC1S2Q6QNY1 142 aa12.89□□□□□ -0.35
RFWD3-209ENST00000575154 CWC27Q6UX04 472 aaKnown RBP12.89□□□□□ -0.35
RFWD3-209ENST00000575154 RGS22Q8NE09 1264 aa12.89□□□□□ -0.35
RFWD3-209ENST00000575154 CCDC94Q9BW85 323 aaPredicted RBP12.89□□□□□ -0.35
RFWD3-209ENST00000575154 NUP62CLQ9H1M0 184 aa12.89□□□□□ -0.35
RFWD3-209ENST00000575154 CFAP45Q9UL16 551 aa12.89□□□□□ -0.35
RFWD3-209ENST00000575154 CNPY2Q9Y2B0 182 aa12.89□□□□□ -0.35
RFWD3-209ENST00000575154 COL15A1P39059 1388 aa12.89□□□□□ -0.35
RFWD3-209ENST00000575154 PI4KAP2A4QPH2 592 aa12.88□□□□□ -0.35
RFWD3-209ENST00000575154 BTBD11A6QL63 1104 aa12.88□□□□□ -0.35
RFWD3-209ENST00000575154 GADD45BO75293 160 aaPredicted RBP12.88□□□□□ -0.35
RFWD3-209ENST00000575154 NEXNQ0ZGT2 675 aa12.88□□□□□ -0.35
RFWD3-209ENST00000575154 TSHZ3Q63HK5 1081 aa12.88□□□□□ -0.35
RFWD3-209ENST00000575154 LARP1BQ659C4 914 aaKnown RBP12.88□□□□□ -0.35
RFWD3-209ENST00000575154 PI4KAP1Q8N8J0 262 aa12.88□□□□□ -0.35
RFWD3-209ENST00000575154 LLPHQ9BRT6 129 aaKnown RBP12.88□□□□□ -0.35
RFWD3-209ENST00000575154 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
RFWD3-209ENST00000575154 FIBPO43427 364 aa12.87□□□□□ -0.35
RFWD3-209ENST00000575154 TUBB4AP04350 444 aa12.87□□□□□ -0.35
RFWD3-209ENST00000575154 CDC25BP30305 580 aa12.87□□□□□ -0.35
RFWD3-209ENST00000575154 CREB3L3Q68CJ9 461 aa12.87□□□□□ -0.35
RFWD3-209ENST00000575154 NOL8Q76FK4 1167 aaKnown RBP12.87□□□□□ -0.35
RFWD3-209ENST00000575154 PAXBP1Q9Y5B6 917 aa12.87□□□□□ -0.35
RFWD3-209ENST00000575154 U3KPZ7 1027 aaPredicted RBP12.87□□□□□ -0.35
RFWD3-209ENST00000575154 JCADQ9P266 1359 aa12.86□□□□□ -0.35
RFWD3-209ENST00000575154 HEG1Q9ULI3 1381 aa12.86□□□□□ -0.35
RFWD3-209ENST00000575154 HCLS1P14317 486 aaPredicted RBP12.86□□□□□ -0.35
RFWD3-209ENST00000575154 UTP14CQ5TAP6 766 aaKnown RBP12.86□□□□□ -0.35
RFWD3-209ENST00000575154 PRPF40BQ6NWY9 871 aaKnown RBP12.86□□□□□ -0.35
RFWD3-209ENST00000575154 LARP1Q6PKG0 1096 aaKnown RBP12.86□□□□□ -0.35
RFWD3-209ENST00000575154 RBM43Q6ZSC3 357 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms