RNA–Protein interactions for RNA: ENST00000574999.1

ATP2A3-214, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 3

Gene ATP2A3, Length 776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-214ENST00000574999 NMRK2Q9NPI5 230 aa17.34■□□□□ 0.37
ATP2A3-214ENST00000574999 NFKBIEO00221 500 aa17.33■□□□□ 0.36
ATP2A3-214ENST00000574999 SRGNP10124 158 aa17.33■□□□□ 0.36
ATP2A3-214ENST00000574999 TSPYL4Q9UJ04 414 aa17.33■□□□□ 0.36
ATP2A3-214ENST00000574999 NIP7Q9Y221 180 aaKnown RBP eCLIP17.33■□□□□ 0.36
ATP2A3-214ENST00000574999 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
ATP2A3-214ENST00000574999 KLRG2A4D1S0 409 aaPredicted RBP17.32■□□□□ 0.36
ATP2A3-214ENST00000574999 NPHP1O15259 732 aa17.32■□□□□ 0.36
ATP2A3-214ENST00000574999 C21orf2O43822 256 aa17.32■□□□□ 0.36
ATP2A3-214ENST00000574999 LMNB1P20700 586 aa17.32■□□□□ 0.36
ATP2A3-214ENST00000574999 STYK1Q6J9G0 422 aa17.32■□□□□ 0.36
ATP2A3-214ENST00000574999 CCDC146Q8IYE0 955 aa17.32■□□□□ 0.36
ATP2A3-214ENST00000574999 NGEFQ8N5V2 710 aa17.32■□□□□ 0.36
ATP2A3-214ENST00000574999 BABAM1Q9NWV8 329 aa17.32■□□□□ 0.36
ATP2A3-214ENST00000574999 ADAMTS8Q9UP79 889 aa17.32■□□□□ 0.36
ATP2A3-214ENST00000574999 ERVV-1B6SEH8 477 aa17.31■□□□□ 0.36
ATP2A3-214ENST00000574999 ZEB1P37275 1124 aaPredicted RBP17.31■□□□□ 0.36
ATP2A3-214ENST00000574999 TPTE2Q6XPS3 522 aa17.31■□□□□ 0.36
ATP2A3-214ENST00000574999 TTLL7Q6ZT98 887 aa17.31■□□□□ 0.36
ATP2A3-214ENST00000574999 PRKRIP1Q9H875 184 aaPredicted RBP17.31■□□□□ 0.36
ATP2A3-214ENST00000574999 SBF1O95248 1867 aa17.31■□□□□ 0.36
ATP2A3-214ENST00000574999 TOMM70O94826 608 aa17.3■□□□□ 0.36
ATP2A3-214ENST00000574999 MYL6BP14649 208 aa17.3■□□□□ 0.36
ATP2A3-214ENST00000574999 HSPA6P17066 643 aa17.3■□□□□ 0.36
ATP2A3-214ENST00000574999 LMOD3Q0VAK6 560 aa17.3■□□□□ 0.36
ATP2A3-214ENST00000574999 CNKSR1Q969H4 720 aa17.3■□□□□ 0.36
ATP2A3-214ENST00000574999 RUNDC1Q96C34 613 aa17.3■□□□□ 0.36
ATP2A3-214ENST00000574999 MASTLQ96GX5 879 aa17.3■□□□□ 0.36
ATP2A3-214ENST00000574999 ZNF219Q9P2Y4 722 aaPredicted RBP17.3■□□□□ 0.36
ATP2A3-214ENST00000574999 TRIM35Q9UPQ4 493 aa17.3■□□□□ 0.36
ATP2A3-214ENST00000574999 COL11A2P13942 1736 aaPredicted RBP17.3■□□□□ 0.36
ATP2A3-214ENST00000574999 MAP3K15Q6ZN16 1313 aa17.29■□□□□ 0.36
ATP2A3-214ENST00000574999 KDM2BQ8NHM5 1336 aa17.29■□□□□ 0.36
ATP2A3-214ENST00000574999 ZC3H4Q9UPT8 1303 aaKnown RBP17.29■□□□□ 0.36
ATP2A3-214ENST00000574999 FAM177BA6PVY3 158 aa17.29■□□□□ 0.36
ATP2A3-214ENST00000574999 PDIA6Q15084 440 aa17.29■□□□□ 0.36
ATP2A3-214ENST00000574999 NEUROD2Q15784 382 aa17.29■□□□□ 0.36
ATP2A3-214ENST00000574999 PRPF40BQ6NWY9 871 aaKnown RBP17.29■□□□□ 0.36
ATP2A3-214ENST00000574999 LRP10Q7Z4F1 713 aa17.29■□□□□ 0.36
ATP2A3-214ENST00000574999 LAMB4A4D0S4 1761 aa17.29■□□□□ 0.36
ATP2A3-214ENST00000574999 ERBB4Q15303 1308 aa17.28■□□□□ 0.36
ATP2A3-214ENST00000574999 CHL1O00533 1208 aa17.28■□□□□ 0.36
ATP2A3-214ENST00000574999 WDR43Q15061 677 aaKnown RBP eCLIP17.28■□□□□ 0.36
ATP2A3-214ENST00000574999 C7orf43Q8WVR3 580 aa17.28■□□□□ 0.36
ATP2A3-214ENST00000574999 RRAGCQ9HB90 399 aa17.28■□□□□ 0.36
ATP2A3-214ENST00000574999 KIF6Q6ZMV9 814 aa17.27■□□□□ 0.36
ATP2A3-214ENST00000574999 NPR1P16066 1061 aa17.26■□□□□ 0.35
ATP2A3-214ENST00000574999 EIF2S2P20042 333 aaKnown RBP17.26■□□□□ 0.35
ATP2A3-214ENST00000574999 ZBTB3Q9H5J0 574 aa17.26■□□□□ 0.35
ATP2A3-214ENST00000574999 GLTPD2A6NH11 291 aa17.25■□□□□ 0.35
ATP2A3-214ENST00000574999 PROSER3Q2NL68 480 aa17.25■□□□□ 0.35
ATP2A3-214ENST00000574999 ZNF34Q8IZ26 560 aa17.25■□□□□ 0.35
ATP2A3-214ENST00000574999 SLX4Q8IY92 1834 aa17.25■□□□□ 0.35
ATP2A3-214ENST00000574999 PCNTO95613 3336 aa17.24■□□□□ 0.35
ATP2A3-214ENST00000574999 UBN2Q6ZU65 1347 aa17.24■□□□□ 0.35
ATP2A3-214ENST00000574999 LTBP3Q9NS15 1303 aa17.24■□□□□ 0.35
ATP2A3-214ENST00000574999 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
ATP2A3-214ENST00000574999 ERFEQ4G0M1 354 aa17.24■□□□□ 0.35
ATP2A3-214ENST00000574999 SUSD4Q5VX71 490 aa17.24■□□□□ 0.35
ATP2A3-214ENST00000574999 GIGYF2Q6Y7W6 1299 aaKnown RBP17.24■□□□□ 0.35
ATP2A3-214ENST00000574999 NUTM1Q86Y26 1132 aa17.24■□□□□ 0.35
ATP2A3-214ENST00000574999 RBM46Q8TBY0 533 aaKnown RBP17.24■□□□□ 0.35
ATP2A3-214ENST00000574999 NYXQ9GZU5 481 aa17.24■□□□□ 0.35
ATP2A3-214ENST00000574999 ANXA1P04083 346 aa17.23■□□□□ 0.35
ATP2A3-214ENST00000574999 GPTP24298 496 aa17.23■□□□□ 0.35
ATP2A3-214ENST00000574999 KRT24Q2M2I5 525 aa17.23■□□□□ 0.35
ATP2A3-214ENST00000574999 SOGA3Q5TF21 947 aa17.23■□□□□ 0.35
ATP2A3-214ENST00000574999 CRY2Q49AN0 593 aa17.22■□□□□ 0.35
ATP2A3-214ENST00000574999 C16orf71Q8IYS4 520 aaPredicted RBP17.22■□□□□ 0.35
ATP2A3-214ENST00000574999 TAOK3Q9H2K8 898 aa17.22■□□□□ 0.35
ATP2A3-214ENST00000574999 LAS1LQ9Y4W2 734 aaKnown RBP17.22■□□□□ 0.35
ATP2A3-214ENST00000574999 ABCC12Q96J65 1359 aa17.22■□□□□ 0.35
ATP2A3-214ENST00000574999 FER1L6Q2WGJ9 1857 aa17.21■□□□□ 0.35
ATP2A3-214ENST00000574999 POTECB2RU33 542 aa17.21■□□□□ 0.35
ATP2A3-214ENST00000574999 VEGFAP15692 232 aaPredicted RBP17.21■□□□□ 0.35
ATP2A3-214ENST00000574999 OLFM4Q6UX06 510 aa17.21■□□□□ 0.35
ATP2A3-214ENST00000574999 NECTIN2Q92692 538 aa17.21■□□□□ 0.35
ATP2A3-214ENST00000574999 NUP98P52948 1817 aa17.21■□□□□ 0.35
ATP2A3-214ENST00000574999 NTSR2O95665 410 aa17.2■□□□□ 0.34
ATP2A3-214ENST00000574999 ALDH1B1P30837 517 aa17.2■□□□□ 0.34
ATP2A3-214ENST00000574999 APLP1P51693 650 aa17.2■□□□□ 0.34
ATP2A3-214ENST00000574999 FSTL1Q12841 308 aa17.2■□□□□ 0.34
ATP2A3-214ENST00000574999 CCDC93Q567U6 631 aa17.2■□□□□ 0.34
ATP2A3-214ENST00000574999 COPS6Q7L5N1 327 aa17.2■□□□□ 0.34
ATP2A3-214ENST00000574999 IBTKQ9P2D0 1353 aaPredicted RBP17.19■□□□□ 0.34
ATP2A3-214ENST00000574999 APAF1O14727 1248 aa17.19■□□□□ 0.34
ATP2A3-214ENST00000574999 DPY19L2Q6NUT2 758 aa17.19■□□□□ 0.34
ATP2A3-214ENST00000574999 XAGE3Q8WTP9 111 aa17.19■□□□□ 0.34
ATP2A3-214ENST00000574999 CFAP44Q96MT7 982 aa17.19■□□□□ 0.34
ATP2A3-214ENST00000574999 DDX21Q9NR30 783 aaKnown RBP eCLIP17.19■□□□□ 0.34
ATP2A3-214ENST00000574999 ARFGEF2Q9Y6D5 1785 aa17.19■□□□□ 0.34
ATP2A3-214ENST00000574999 CCDC88AQ3V6T2 1871 aa17.18■□□□□ 0.34
ATP2A3-214ENST00000574999 HOXA10P31260 410 aaPredicted RBP17.18■□□□□ 0.34
ATP2A3-214ENST00000574999 PARP10Q53GL7 1025 aa17.18■□□□□ 0.34
ATP2A3-214ENST00000574999 C3orf67Q6ZVT6 689 aa17.18■□□□□ 0.34
ATP2A3-214ENST00000574999 RTKN2Q8IZC4 609 aa17.18■□□□□ 0.34
ATP2A3-214ENST00000574999 DNAJC5GQ8N7S2 189 aa17.18■□□□□ 0.34
ATP2A3-214ENST00000574999 TNRC6CQ9HCJ0 1690 aaKnown RBP17.17■□□□□ 0.34
ATP2A3-214ENST00000574999 ZNF853P0CG23 659 aa17.17■□□□□ 0.34
ATP2A3-214ENST00000574999 FKBP4Q02790 459 aaKnown RBP eCLIP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms