RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 ADAMTS8Q9UP79 889 aa13.86□□□□□ -0.19
LITAF-216ENST00000574848 IBTKQ9P2D0 1353 aaPredicted RBP13.85□□□□□ -0.19
LITAF-216ENST00000574848 RIC1Q4ADV7 1423 aa13.85□□□□□ -0.19
LITAF-216ENST00000574848 PDE6BP35913 854 aa13.85□□□□□ -0.19
LITAF-216ENST00000574848 C1QTNF8P60827 252 aa13.85□□□□□ -0.19
LITAF-216ENST00000574848 ARHGAP27Q6ZUM4 889 aa13.85□□□□□ -0.19
LITAF-216ENST00000574848 C2CD5Q86YS7 1000 aa13.85□□□□□ -0.19
LITAF-216ENST00000574848 CCDC146Q8IYE0 955 aa13.85□□□□□ -0.19
LITAF-216ENST00000574848 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
LITAF-216ENST00000574848 TNRC6CQ9HCJ0 1690 aaKnown RBP13.85□□□□□ -0.19
LITAF-216ENST00000574848 FER1L6Q2WGJ9 1857 aa13.84□□□□□ -0.19
LITAF-216ENST00000574848 TIAM2Q8IVF5 1701 aa13.84□□□□□ -0.19
LITAF-216ENST00000574848 ERVV-1B6SEH8 477 aa13.84□□□□□ -0.19
LITAF-216ENST00000574848 H0YIN7 160 aa13.84□□□□□ -0.19
LITAF-216ENST00000574848 ST5P78524 1137 aa13.84□□□□□ -0.19
LITAF-216ENST00000574848 LRP10Q7Z4F1 713 aa13.84□□□□□ -0.19
LITAF-216ENST00000574848 TTLL6Q8N841 843 aa13.84□□□□□ -0.19
LITAF-216ENST00000574848 GPBP1L1Q9HC44 474 aaPredicted RBP13.84□□□□□ -0.19
LITAF-216ENST00000574848 MAP3K15Q6ZN16 1313 aa13.84□□□□□ -0.19
LITAF-216ENST00000574848 ANKRD36CQ5JPF3 1778 aa13.83□□□□□ -0.19
LITAF-216ENST00000574848 CACNA1SQ13698 1873 aa13.83□□□□□ -0.2
LITAF-216ENST00000574848 KLRG2A4D1S0 409 aaPredicted RBP13.83□□□□□ -0.2
LITAF-216ENST00000574848 CHL1O00533 1208 aa13.83□□□□□ -0.2
LITAF-216ENST00000574848 MRS2Q9HD23 443 aa13.83□□□□□ -0.2
LITAF-216ENST00000574848 RRP7AQ9Y3A4 280 aaKnown RBP13.83□□□□□ -0.2
LITAF-216ENST00000574848 ZC3H4Q9UPT8 1303 aaKnown RBP13.83□□□□□ -0.2
LITAF-216ENST00000574848 PDIA6Q15084 440 aa13.82□□□□□ -0.2
LITAF-216ENST00000574848 HLFQ16534 295 aa13.82□□□□□ -0.2
LITAF-216ENST00000574848 STYK1Q6J9G0 422 aa13.82□□□□□ -0.2
LITAF-216ENST00000574848 NBPF5PQ86XG9 351 aaPredicted RBP13.82□□□□□ -0.2
LITAF-216ENST00000574848 NIP7Q9Y221 180 aaKnown RBP eCLIP13.82□□□□□ -0.2
LITAF-216ENST00000574848 SLX4Q8IY92 1834 aa13.81□□□□□ -0.2
LITAF-216ENST00000574848 HOXB7P09629 217 aa13.81□□□□□ -0.2
LITAF-216ENST00000574848 SRGNP10124 158 aa13.81□□□□□ -0.2
LITAF-216ENST00000574848 C9orf131Q5VYM1 1079 aa13.81□□□□□ -0.2
LITAF-216ENST00000574848 DICER1Q9UPY3 1922 aaKnown RBP13.81□□□□□ -0.2
LITAF-216ENST00000574848 KIF3CO14782 793 aa13.8□□□□□ -0.2
LITAF-216ENST00000574848 KIF6Q6ZMV9 814 aa13.8□□□□□ -0.2
LITAF-216ENST00000574848 TTLL7Q6ZT98 887 aa13.8□□□□□ -0.2
LITAF-216ENST00000574848 CCDC24Q8N4L8 307 aa13.8□□□□□ -0.2
LITAF-216ENST00000574848 LTBP3Q9NS15 1303 aa13.8□□□□□ -0.2
LITAF-216ENST00000574848 NFKBIEO00221 500 aa13.79□□□□□ -0.2
LITAF-216ENST00000574848 MYL6BP14649 208 aa13.79□□□□□ -0.2
LITAF-216ENST00000574848 RASSF7Q02833 373 aa13.79□□□□□ -0.2
LITAF-216ENST00000574848 NEUROD2Q15784 382 aa13.79□□□□□ -0.2
LITAF-216ENST00000574848 TPTE2Q6XPS3 522 aa13.79□□□□□ -0.2
LITAF-216ENST00000574848 CNKSR1Q969H4 720 aa13.79□□□□□ -0.2
LITAF-216ENST00000574848 MASTLQ96GX5 879 aa13.79□□□□□ -0.2
LITAF-216ENST00000574848 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
LITAF-216ENST00000574848 RNF181Q9P0P0 153 aa13.79□□□□□ -0.2
LITAF-216ENST00000574848 UBN2Q6ZU65 1347 aa13.79□□□□□ -0.2
LITAF-216ENST00000574848 ABCC12Q96J65 1359 aa13.79□□□□□ -0.2
LITAF-216ENST00000574848 CCDC88AQ3V6T2 1871 aa13.78□□□□□ -0.2
LITAF-216ENST00000574848 NPHP1O15259 732 aa13.78□□□□□ -0.2
LITAF-216ENST00000574848 ZNF853P0CG23 659 aa13.78□□□□□ -0.2
LITAF-216ENST00000574848 LMNB1P20700 586 aa13.78□□□□□ -0.2
LITAF-216ENST00000574848 PRELPP51888 382 aa13.78□□□□□ -0.2
LITAF-216ENST00000574848 GIGYF2Q6Y7W6 1299 aaKnown RBP13.78□□□□□ -0.2
LITAF-216ENST00000574848 ZNF526Q8TF50 670 aaPredicted RBP13.78□□□□□ -0.2
LITAF-216ENST00000574848 NYXQ9GZU5 481 aa13.78□□□□□ -0.2
LITAF-216ENST00000574848 NPR1P16066 1061 aa13.77□□□□□ -0.21
LITAF-216ENST00000574848 PROSER3Q2NL68 480 aa13.77□□□□□ -0.21
LITAF-216ENST00000574848 CRY2Q49AN0 593 aa13.77□□□□□ -0.21
LITAF-216ENST00000574848 PRPF40BQ6NWY9 871 aaKnown RBP13.77□□□□□ -0.21
LITAF-216ENST00000574848 ZNF34Q8IZ26 560 aa13.77□□□□□ -0.21
LITAF-216ENST00000574848 SNED1Q8TER0 1413 aa13.77□□□□□ -0.21
LITAF-216ENST00000574848 ZNF622Q969S3 477 aaKnown RBP eCLIP13.77□□□□□ -0.21
LITAF-216ENST00000574848 ZBTB3Q9H5J0 574 aa13.77□□□□□ -0.21
LITAF-216ENST00000574848 RNF123Q5XPI4 1314 aa13.76□□□□□ -0.21
LITAF-216ENST00000574848 APAF1O14727 1248 aa13.76□□□□□ -0.21
LITAF-216ENST00000574848 CALD1Q05682 793 aaKnown RBP13.76□□□□□ -0.21
LITAF-216ENST00000574848 KRT24Q2M2I5 525 aa13.76□□□□□ -0.21
LITAF-216ENST00000574848 SOGA3Q5TF21 947 aa13.76□□□□□ -0.21
LITAF-216ENST00000574848 NGEFQ8N5V2 710 aa13.76□□□□□ -0.21
LITAF-216ENST00000574848 DDX21Q9NR30 783 aaKnown RBP eCLIP13.76□□□□□ -0.21
LITAF-216ENST00000574848 IFT57Q9NWB7 429 aa13.76□□□□□ -0.21
LITAF-216ENST00000574848 C21orf2O43822 256 aa13.75□□□□□ -0.21
LITAF-216ENST00000574848 NTSR2O95665 410 aa13.75□□□□□ -0.21
LITAF-216ENST00000574848 EIF2S2P20042 333 aaKnown RBP13.75□□□□□ -0.21
LITAF-216ENST00000574848 CCDC184Q52MB2 194 aa13.75□□□□□ -0.21
LITAF-216ENST00000574848 PARP10Q53GL7 1025 aa13.75□□□□□ -0.21
LITAF-216ENST00000574848 C7orf43Q8WVR3 580 aa13.75□□□□□ -0.21
LITAF-216ENST00000574848 MBIPQ9NS73 344 aa13.75□□□□□ -0.21
LITAF-216ENST00000574848 WDR90Q96KV7 1748 aa13.75□□□□□ -0.21
LITAF-216ENST00000574848 LAMB2P55268 1798 aa13.74□□□□□ -0.21
LITAF-216ENST00000574848 KDM2BQ8NHM5 1336 aa13.74□□□□□ -0.21
LITAF-216ENST00000574848 HNRNPUQ00839 825 aaKnown RBP eCLIP13.74□□□□□ -0.21
LITAF-216ENST00000574848 NCBP3Q53F19 620 aaKnown RBP13.74□□□□□ -0.21
LITAF-216ENST00000574848 NMRK2Q9NPI5 230 aa13.74□□□□□ -0.21
LITAF-216ENST00000574848 GTF3C3Q9Y5Q9 886 aa13.74□□□□□ -0.21
LITAF-216ENST00000574848 SENP3-EIF4A1A0A087X0R7 540 aa13.73□□□□□ -0.21
LITAF-216ENST00000574848 ANXA1P04083 346 aa13.73□□□□□ -0.21
LITAF-216ENST00000574848 GPTP24298 496 aa13.73□□□□□ -0.21
LITAF-216ENST00000574848 GNAI1P63096 354 aa13.73□□□□□ -0.21
LITAF-216ENST00000574848 CCDC27Q2M243 656 aa13.73□□□□□ -0.21
LITAF-216ENST00000574848 HDGFL1Q5TGJ6 251 aa13.73□□□□□ -0.21
LITAF-216ENST00000574848 SUSD4Q5VX71 490 aa13.73□□□□□ -0.21
LITAF-216ENST00000574848 TAOK3Q9H2K8 898 aa13.73□□□□□ -0.21
LITAF-216ENST00000574848 CHPF2Q9P2E5 772 aa13.73□□□□□ -0.21
LITAF-216ENST00000574848 LAS1LQ9Y4W2 734 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms