RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 DDX10Q13206 875 aaKnown RBP27.91■■■□□ 2.06
CHRNB1-206ENST00000574054 COL11A2P13942 1736 aaPredicted RBP27.89■■■□□ 2.06
CHRNB1-206ENST00000574054 C21orf2O43822 256 aa27.89■■■□□ 2.06
CHRNB1-206ENST00000574054 NFKBIEO00221 500 aa27.88■■■□□ 2.05
CHRNB1-206ENST00000574054 NGEFQ8N5V2 710 aa27.88■■■□□ 2.05
CHRNB1-206ENST00000574054 NIP7Q9Y221 180 aaKnown RBP eCLIP27.88■■■□□ 2.05
CHRNB1-206ENST00000574054 FAM177BA6PVY3 158 aa27.87■■■□□ 2.05
CHRNB1-206ENST00000574054 PRELPP51888 382 aa27.87■■■□□ 2.05
CHRNB1-206ENST00000574054 EIF4A1P60842 406 aaKnown RBP27.87■■■□□ 2.05
CHRNB1-206ENST00000574054 RRAGCQ9HB90 399 aa27.87■■■□□ 2.05
CHRNB1-206ENST00000574054 ZC3H4Q9UPT8 1303 aaKnown RBP27.87■■■□□ 2.05
CHRNB1-206ENST00000574054 LAMB4A4D0S4 1761 aa27.86■■■□□ 2.05
CHRNB1-206ENST00000574054 KDM3BQ7LBC6 1761 aa27.86■■■□□ 2.05
CHRNB1-206ENST00000574054 STYK1Q6J9G0 422 aa27.86■■■□□ 2.05
CHRNB1-206ENST00000574054 CNKSR1Q969H4 720 aa27.86■■■□□ 2.05
CHRNB1-206ENST00000574054 SRGNP10124 158 aa27.85■■■□□ 2.05
CHRNB1-206ENST00000574054 RBM46Q8TBY0 533 aaKnown RBP27.85■■■□□ 2.05
CHRNB1-206ENST00000574054 RRP7AQ9Y3A4 280 aaKnown RBP27.85■■■□□ 2.05
CHRNB1-206ENST00000574054 RIPK4P57078 832 aa27.84■■■□□ 2.05
CHRNB1-206ENST00000574054 HLFQ16534 295 aa27.84■■■□□ 2.05
CHRNB1-206ENST00000574054 PRPF40BQ6NWY9 871 aaKnown RBP27.84■■■□□ 2.05
CHRNB1-206ENST00000574054 MASTLQ96GX5 879 aa27.84■■■□□ 2.05
CHRNB1-206ENST00000574054 RGL2O15211 777 aa27.83■■■□□ 2.05
CHRNB1-206ENST00000574054 TPTE2Q6XPS3 522 aa27.83■■■□□ 2.05
CHRNB1-206ENST00000574054 MYL6BP14649 208 aa27.82■■■□□ 2.04
CHRNB1-206ENST00000574054 APLP1P51693 650 aa27.82■■■□□ 2.04
CHRNB1-206ENST00000574054 TSPYL4Q9UJ04 414 aa27.82■■■□□ 2.04
CHRNB1-206ENST00000574054 MYBBP1AQ9BQG0 1328 aaKnown RBP27.82■■■□□ 2.04
CHRNB1-206ENST00000574054 KIF6Q6ZMV9 814 aa27.81■■■□□ 2.04
CHRNB1-206ENST00000574054 TNRC6CQ9HCJ0 1690 aaKnown RBP27.81■■■□□ 2.04
CHRNB1-206ENST00000574054 GLTPD2A6NH11 291 aa27.8■■■□□ 2.04
CHRNB1-206ENST00000574054 GTF2E1P29083 439 aaPredicted RBP27.8■■■□□ 2.04
CHRNB1-206ENST00000574054 TIAM2Q8IVF5 1701 aa27.79■■■□□ 2.04
CHRNB1-206ENST00000574054 TAOK3Q9H2K8 898 aa27.79■■■□□ 2.04
CHRNB1-206ENST00000574054 SLX4Q8IY92 1834 aa27.78■■■□□ 2.04
CHRNB1-206ENST00000574054 MAP3K15Q6ZN16 1313 aa27.78■■■□□ 2.04
CHRNB1-206ENST00000574054 NPR1P16066 1061 aa27.78■■■□□ 2.04
CHRNB1-206ENST00000574054 TMPOP42166 694 aaKnown RBP27.78■■■□□ 2.04
CHRNB1-206ENST00000574054 LMOD3Q0VAK6 560 aa27.78■■■□□ 2.04
CHRNB1-206ENST00000574054 ERFEQ4G0M1 354 aa27.78■■■□□ 2.04
CHRNB1-206ENST00000574054 SOGA3Q5TF21 947 aa27.78■■■□□ 2.04
CHRNB1-206ENST00000574054 TTLL7Q6ZT98 887 aa27.78■■■□□ 2.04
CHRNB1-206ENST00000574054 CCDC146Q8IYE0 955 aa27.78■■■□□ 2.04
CHRNB1-206ENST00000574054 CCDC88AQ3V6T2 1871 aa27.78■■■□□ 2.04
CHRNB1-206ENST00000574054 ERVV-1B6SEH8 477 aa27.77■■■□□ 2.04
CHRNB1-206ENST00000574054 CACNA1SQ13698 1873 aa27.76■■■□□ 2.04
CHRNB1-206ENST00000574054 FSTL1Q12841 308 aa27.76■■■□□ 2.03
CHRNB1-206ENST00000574054 ZBTB3Q9H5J0 574 aa27.76■■■□□ 2.03
CHRNB1-206ENST00000574054 LTBP3Q9NS15 1303 aa27.75■■■□□ 2.03
CHRNB1-206ENST00000574054 WDR43Q15061 677 aaKnown RBP eCLIP27.75■■■□□ 2.03
CHRNB1-206ENST00000574054 NEUROD2Q15784 382 aa27.75■■■□□ 2.03
CHRNB1-206ENST00000574054 FER1L6Q2WGJ9 1857 aa27.74■■■□□ 2.03
CHRNB1-206ENST00000574054 KLRG2A4D1S0 409 aaPredicted RBP27.74■■■□□ 2.03
CHRNB1-206ENST00000574054 VEGFAP15692 232 aaPredicted RBP27.74■■■□□ 2.03
CHRNB1-206ENST00000574054 NYXQ9GZU5 481 aa27.74■■■□□ 2.03
CHRNB1-206ENST00000574054 EIF2S2P20042 333 aaKnown RBP27.73■■■□□ 2.03
CHRNB1-206ENST00000574054 GPTP24298 496 aa27.73■■■□□ 2.03
CHRNB1-206ENST00000574054 DPY19L2Q6NUT2 758 aa27.73■■■□□ 2.03
CHRNB1-206ENST00000574054 ERBB4Q15303 1308 aa27.72■■■□□ 2.03
CHRNB1-206ENST00000574054 CCDC93Q567U6 631 aa27.72■■■□□ 2.03
CHRNB1-206ENST00000574054 NUTM1Q86Y26 1132 aa27.72■■■□□ 2.03
CHRNB1-206ENST00000574054 ARFGEF2Q9Y6D5 1785 aa27.72■■■□□ 2.03
CHRNB1-206ENST00000574054 SMC1BQ8NDV3 1235 aa27.71■■■□□ 2.03
CHRNB1-206ENST00000574054 BABAM1Q9NWV8 329 aa27.71■■■□□ 2.03
CHRNB1-206ENST00000574054 ABCC12Q96J65 1359 aa27.71■■■□□ 2.03
CHRNB1-206ENST00000574054 C7orf43Q8WVR3 580 aa27.7■■■□□ 2.02
CHRNB1-206ENST00000574054 RUNDC1Q96C34 613 aa27.69■■■□□ 2.02
CHRNB1-206ENST00000574054 NUP98P52948 1817 aa27.69■■■□□ 2.02
CHRNB1-206ENST00000574054 UBN2Q6ZU65 1347 aa27.68■■■□□ 2.02
CHRNB1-206ENST00000574054 OLFM4Q6UX06 510 aa27.68■■■□□ 2.02
CHRNB1-206ENST00000574054 NECTIN2Q92692 538 aa27.68■■■□□ 2.02
CHRNB1-206ENST00000574054 LAS1LQ9Y4W2 734 aaKnown RBP27.68■■■□□ 2.02
CHRNB1-206ENST00000574054 DICER1Q9UPY3 1922 aaKnown RBP27.67■■■□□ 2.02
CHRNB1-206ENST00000574054 ALDH1B1P30837 517 aa27.67■■■□□ 2.02
CHRNB1-206ENST00000574054 HTRA3P83110 453 aa27.67■■■□□ 2.02
CHRNB1-206ENST00000574054 ANXA1P04083 346 aa27.66■■■□□ 2.02
CHRNB1-206ENST00000574054 PDIA6Q15084 440 aa27.66■■■□□ 2.02
CHRNB1-206ENST00000574054 PROSER3Q2NL68 480 aa27.66■■■□□ 2.02
CHRNB1-206ENST00000574054 SUSD4Q5VX71 490 aa27.66■■■□□ 2.02
CHRNB1-206ENST00000574054 GIGYF2Q6Y7W6 1299 aaKnown RBP27.66■■■□□ 2.02
CHRNB1-206ENST00000574054 FKBP4Q02790 459 aaKnown RBP eCLIP27.65■■■□□ 2.02
CHRNB1-206ENST00000574054 DNAJC5GQ8N7S2 189 aa27.65■■■□□ 2.02
CHRNB1-206ENST00000574054 RPGRQ92834 1020 aaKnown RBP27.65■■■□□ 2.02
CHRNB1-206ENST00000574054 ZNF277Q9NRM2 450 aaPredicted RBP27.65■■■□□ 2.02
CHRNB1-206ENST00000574054 ADAMTS8Q9UP79 889 aa27.65■■■□□ 2.02
CHRNB1-206ENST00000574054 WDR90Q96KV7 1748 aa27.64■■■□□ 2.02
CHRNB1-206ENST00000574054 IBTKQ9P2D0 1353 aaPredicted RBP27.64■■■□□ 2.02
CHRNB1-206ENST00000574054 POTECB2RU33 542 aa27.64■■■□□ 2.02
CHRNB1-206ENST00000574054 ZNF34Q8IZ26 560 aa27.64■■■□□ 2.02
CHRNB1-206ENST00000574054 RTKN2Q8IZC4 609 aa27.64■■■□□ 2.02
CHRNB1-206ENST00000574054 DDNO94850 711 aaPredicted RBP27.63■■■□□ 2.01
CHRNB1-206ENST00000574054 CRY2Q49AN0 593 aa27.63■■■□□ 2.01
CHRNB1-206ENST00000574054 LRP10Q7Z4F1 713 aa27.63■■■□□ 2.01
CHRNB1-206ENST00000574054 TRIM35Q9UPQ4 493 aa27.63■■■□□ 2.01
CHRNB1-206ENST00000574054 PRKRIP1Q9H875 184 aaPredicted RBP27.62■■■□□ 2.01
CHRNB1-206ENST00000574054 CHL1O00533 1208 aa27.61■■■□□ 2.01
CHRNB1-206ENST00000574054 NTSR2O95665 410 aa27.61■■■□□ 2.01
CHRNB1-206ENST00000574054 AIMP1Q12904 312 aaKnown RBP27.61■■■□□ 2.01
CHRNB1-206ENST00000574054 KRT24Q2M2I5 525 aa27.61■■■□□ 2.01
CHRNB1-206ENST00000574054 PARP10Q53GL7 1025 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms