RNA–Protein interactions for RNA: ENST00000573725.1

PRPF8-209, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-209ENST00000573725 MRC1P22897 1456 aa8.14□□□□□ -1.11
PRPF8-209ENST00000573725 XRCC6P12956 609 aaKnown RBP eCLIP8.14□□□□□ -1.11
PRPF8-209ENST00000573725 KCNA3P22001 575 aa8.14□□□□□ -1.11
PRPF8-209ENST00000573725 C1orf141Q5JVX7 400 aa8.14□□□□□ -1.11
PRPF8-209ENST00000573725 CCDC87Q9NVE4 849 aa8.14□□□□□ -1.11
PRPF8-209ENST00000573725 NUDCQ9Y266 331 aa8.14□□□□□ -1.11
PRPF8-209ENST00000573725 TIAM2Q8IVF5 1701 aa8.14□□□□□ -1.11
PRPF8-209ENST00000573725 KCPQ6ZWJ8 1503 aa8.13□□□□□ -1.11
PRPF8-209ENST00000573725 FER1L6Q2WGJ9 1857 aa8.13□□□□□ -1.11
PRPF8-209ENST00000573725 ERBB4Q15303 1308 aa8.13□□□□□ -1.11
PRPF8-209ENST00000573725 USP42Q9H9J4 1324 aaKnown RBP8.13□□□□□ -1.11
PRPF8-209ENST00000573725 DDR1Q08345 913 aa8.13□□□□□ -1.11
PRPF8-209ENST00000573725 AMER1Q5JTC6 1135 aaPredicted RBP8.13□□□□□ -1.11
PRPF8-209ENST00000573725 INTS5Q6P9B9 1019 aaKnown RBP8.13□□□□□ -1.11
PRPF8-209ENST00000573725 KIAA1211Q6ZU35 1233 aa8.13□□□□□ -1.11
PRPF8-209ENST00000573725 MTERF4Q7Z6M4 381 aaKnown RBP8.13□□□□□ -1.11
PRPF8-209ENST00000573725 LGR6Q9HBX8 967 aa8.13□□□□□ -1.11
PRPF8-209ENST00000573725 KNSTRNQ9Y448 316 aa8.13□□□□□ -1.11
PRPF8-209ENST00000573725 PARP3Q9Y6F1 533 aa8.13□□□□□ -1.11
PRPF8-209ENST00000573725 DLG5Q8TDM6 1919 aa8.13□□□□□ -1.11
PRPF8-209ENST00000573725 COL11A2P13942 1736 aaPredicted RBP8.12□□□□□ -1.11
PRPF8-209ENST00000573725 GOLGA6L3A6NEY3 463 aa8.12□□□□□ -1.11
PRPF8-209ENST00000573725 FCHSD2O94868 740 aa8.12□□□□□ -1.11
PRPF8-209ENST00000573725 SLC4A3P48751 1232 aa8.12□□□□□ -1.11
PRPF8-209ENST00000573725 ARHGAP27Q6ZUM4 889 aa8.12□□□□□ -1.11
PRPF8-209ENST00000573725 DNAJC10Q8IXB1 793 aa8.12□□□□□ -1.11
PRPF8-209ENST00000573725 SCN7AQ01118 1682 aa8.11□□□□□ -1.11
PRPF8-209ENST00000573725 KIF7Q2M1P5 1343 aa8.11□□□□□ -1.11
PRPF8-209ENST00000573725 KIF20AO95235 890 aa8.11□□□□□ -1.11
PRPF8-209ENST00000573725 SLC39A6Q13433 755 aa8.11□□□□□ -1.11
PRPF8-209ENST00000573725 AKAP4Q5JQC9 854 aa8.11□□□□□ -1.11
PRPF8-209ENST00000573725 POTEDQ86YR6 584 aa8.11□□□□□ -1.11
PRPF8-209ENST00000573725 ANP32BQ92688 251 aaKnown RBP8.11□□□□□ -1.11
PRPF8-209ENST00000573725 SLC52A2Q9HAB3 445 aa8.11□□□□□ -1.11
PRPF8-209ENST00000573725 NMRK2Q9NPI5 230 aa8.11□□□□□ -1.11
PRPF8-209ENST00000573725 BCORQ6W2J9 1755 aa8.11□□□□□ -1.11
PRPF8-209ENST00000573725 ARFGEF2Q9Y6D5 1785 aa8.11□□□□□ -1.11
PRPF8-209ENST00000573725 SLX4Q8IY92 1834 aa8.1□□□□□ -1.11
PRPF8-209ENST00000573725 PCNTO95613 3336 aa8.1□□□□□ -1.11
PRPF8-209ENST00000573725 SOS1Q07889 1333 aaPredicted RBP8.1□□□□□ -1.11
PRPF8-209ENST00000573725 POLRMTO00411 1230 aaKnown RBP8.1□□□□□ -1.11
PRPF8-209ENST00000573725 PER1O15534 1290 aaPredicted RBP8.1□□□□□ -1.11
PRPF8-209ENST00000573725 RNMTO43148 476 aaKnown RBP8.1□□□□□ -1.11
PRPF8-209ENST00000573725 HMOX1P09601 288 aa8.1□□□□□ -1.11
PRPF8-209ENST00000573725 TM4SF1P30408 202 aa8.1□□□□□ -1.11
PRPF8-209ENST00000573725 CHRNA5P30532 468 aa8.1□□□□□ -1.11
PRPF8-209ENST00000573725 IFFO2Q5TF58 517 aa8.1□□□□□ -1.11
PRPF8-209ENST00000573725 C9orf131Q5VYM1 1079 aa8.1□□□□□ -1.11
PRPF8-209ENST00000573725 PLCD3Q8N3E9 789 aa8.1□□□□□ -1.11
PRPF8-209ENST00000573725 PANK2Q9BZ23 570 aa8.1□□□□□ -1.11
PRPF8-209ENST00000573725 GTPBP4Q9BZE4 634 aaKnown RBP8.1□□□□□ -1.11
PRPF8-209ENST00000573725 PRDM10Q9NQV6 1147 aa8.1□□□□□ -1.11
PRPF8-209ENST00000573725 PIM2Q9P1W9 311 aa8.1□□□□□ -1.11
PRPF8-209ENST00000573725 BCCIPQ9P287 314 aaKnown RBP eCLIP8.1□□□□□ -1.11
PRPF8-209ENST00000573725 COL3A1P02461 1466 aaPredicted RBP8.1□□□□□ -1.11
PRPF8-209ENST00000573725 COL15A1P39059 1388 aa8.1□□□□□ -1.11
PRPF8-209ENST00000573725 VGLL3A8MV65 326 aa8.09□□□□□ -1.11
PRPF8-209ENST00000573725 OFD1O75665 1012 aa8.09□□□□□ -1.11
PRPF8-209ENST00000573725 TOMM70O94826 608 aa8.09□□□□□ -1.11
PRPF8-209ENST00000573725 LETM1O95202 739 aaPredicted RBP8.09□□□□□ -1.11
PRPF8-209ENST00000573725 CYP19A1P11511 503 aaPredicted RBP8.09□□□□□ -1.11
PRPF8-209ENST00000573725 MTHFSDQ2M296 383 aaKnown RBP8.09□□□□□ -1.11
PRPF8-209ENST00000573725 DALRD3Q5D0E6 543 aaKnown RBP8.09□□□□□ -1.11
PRPF8-209ENST00000573725 TAF3Q5VWG9 929 aa8.09□□□□□ -1.11
PRPF8-209ENST00000573725 USPL1Q5W0Q7 1092 aa8.09□□□□□ -1.11
PRPF8-209ENST00000573725 ZBTB1Q9Y2K1 713 aa8.09□□□□□ -1.11
PRPF8-209ENST00000573725 ZPR1O75312 459 aa8.08□□□□□ -1.12
PRPF8-209ENST00000573725 ZSCAN20P17040 1043 aaPredicted RBP8.08□□□□□ -1.12
PRPF8-209ENST00000573725 APLP1P51693 650 aa8.08□□□□□ -1.12
PRPF8-209ENST00000573725 NFIXQ14938 502 aa8.08□□□□□ -1.12
PRPF8-209ENST00000573725 CCDC184Q52MB2 194 aa8.08□□□□□ -1.12
PRPF8-209ENST00000573725 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.08□□□□□ -1.12
PRPF8-209ENST00000573725 DNAJC5GQ8N7S2 189 aa8.08□□□□□ -1.12
PRPF8-209ENST00000573725 BCL2L12Q9HB09 334 aa8.08□□□□□ -1.12
PRPF8-209ENST00000573725 NARFQ9UHQ1 456 aa8.08□□□□□ -1.12
PRPF8-209ENST00000573725 NUP98P52948 1817 aa8.08□□□□□ -1.12
PRPF8-209ENST00000573725 DIAPH1O60610 1272 aaKnown RBP8.07□□□□□ -1.12
PRPF8-209ENST00000573725 MRE11P49959 708 aa8.07□□□□□ -1.12
PRPF8-209ENST00000573725 CC2D1BQ5T0F9 858 aaKnown RBP8.07□□□□□ -1.12
PRPF8-209ENST00000573725 RGS22Q8NE09 1264 aa8.07□□□□□ -1.12
PRPF8-209ENST00000573725 RNF181Q9P0P0 153 aa8.07□□□□□ -1.12
PRPF8-209ENST00000573725 CARMIL3Q8ND23 1372 aa8.07□□□□□ -1.12
PRPF8-209ENST00000573725 PRELPP51888 382 aa8.06□□□□□ -1.12
PRPF8-209ENST00000573725 IRX3P78415 501 aaPredicted RBP8.06□□□□□ -1.12
PRPF8-209ENST00000573725 RASSF7Q02833 373 aa8.06□□□□□ -1.12
PRPF8-209ENST00000573725 RBM46Q8TBY0 533 aaKnown RBP8.06□□□□□ -1.12
PRPF8-209ENST00000573725 CCDC94Q9BW85 323 aaPredicted RBP8.06□□□□□ -1.12
PRPF8-209ENST00000573725 SERPINB2P05120 415 aa8.05□□□□□ -1.12
PRPF8-209ENST00000573725 EIF5P55010 431 aaKnown RBP8.05□□□□□ -1.12
PRPF8-209ENST00000573725 HTRA3P83110 453 aa8.05□□□□□ -1.12
PRPF8-209ENST00000573725 IL17REQ8NFR9 667 aa8.05□□□□□ -1.12
PRPF8-209ENST00000573725 ZNF496Q96IT1 587 aaPredicted RBP8.05□□□□□ -1.12
PRPF8-209ENST00000573725 RRAGCQ9HB90 399 aa8.05□□□□□ -1.12
PRPF8-209ENST00000573725 ISY1Q9ULR0 285 aaKnown RBP8.05□□□□□ -1.12
PRPF8-209ENST00000573725 LAMB4A4D0S4 1761 aa8.05□□□□□ -1.12
PRPF8-209ENST00000573725 KDM2BQ8NHM5 1336 aa8.04□□□□□ -1.12
PRPF8-209ENST00000573725 SCN4AP35499 1836 aa8.04□□□□□ -1.12
PRPF8-209ENST00000573725 ZNF790Q6PG37 636 aa8.04□□□□□ -1.12
PRPF8-209ENST00000573725 FAM9BQ8IZU0 186 aa8.04□□□□□ -1.12
PRPF8-209ENST00000573725 EXOC6Q8TAG9 804 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms