RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 NGLY1Q96IV0 654 aa9.08□□□□□ -0.96
CDC27-215ENST00000573550 CFHR5Q9BXR6 569 aa9.08□□□□□ -0.96
CDC27-215ENST00000573550 LORP23490 312 aaPredicted RBP9.07□□□□□ -0.96
CDC27-215ENST00000573550 RTN1Q16799 776 aa9.07□□□□□ -0.96
CDC27-215ENST00000573550 SAMD5Q5TGI4 173 aa9.07□□□□□ -0.96
CDC27-215ENST00000573550 LRRC69Q6ZNQ3 347 aa9.07□□□□□ -0.96
CDC27-215ENST00000573550 ABHD17AQ96GS6 310 aa9.07□□□□□ -0.96
CDC27-215ENST00000573550 QTRT2Q9H974 415 aaKnown RBP9.07□□□□□ -0.96
CDC27-215ENST00000573550 HCN2Q9UL51 889 aa9.07□□□□□ -0.96
CDC27-215ENST00000573550 ATXN7L1Q9ULK2 861 aaPredicted RBP9.07□□□□□ -0.96
CDC27-215ENST00000573550 PCDHGC4Q9Y5F7 938 aa9.07□□□□□ -0.96
CDC27-215ENST00000573550 HSH2DQ96JZ2 352 aa9.06□□□□□ -0.96
CDC27-215ENST00000573550 MBIPQ9NS73 344 aa9.06□□□□□ -0.96
CDC27-215ENST00000573550 DCDC2BA2VCK2 349 aa9.05□□□□□ -0.96
CDC27-215ENST00000573550 CARNS1A5YM72 827 aa9.05□□□□□ -0.96
CDC27-215ENST00000573550 ATXN7O15265 892 aaPredicted RBP9.05□□□□□ -0.96
CDC27-215ENST00000573550 FAM157BP0CG42 384 aa9.05□□□□□ -0.96
CDC27-215ENST00000573550 ZNF280CQ8ND82 737 aa9.05□□□□□ -0.96
CDC27-215ENST00000573550 SUSD3Q96L08 255 aa9.05□□□□□ -0.96
CDC27-215ENST00000573550 PHF24Q9UPV7 400 aa9.05□□□□□ -0.96
CDC27-215ENST00000573550 GJA3Q9Y6H8 435 aa9.05□□□□□ -0.96
CDC27-215ENST00000573550 EFSO43281 561 aa9.04□□□□□ -0.96
CDC27-215ENST00000573550 ATP2B4P23634 1241 aa9.04□□□□□ -0.96
CDC27-215ENST00000573550 SRSF11Q05519 484 aaKnown RBP9.04□□□□□ -0.96
CDC27-215ENST00000573550 TNP2Q05952 138 aa9.04□□□□□ -0.96
CDC27-215ENST00000573550 VTI1AQ96AJ9 217 aa9.04□□□□□ -0.96
CDC27-215ENST00000573550 MYO19Q96H55 970 aa9.04□□□□□ -0.96
CDC27-215ENST00000573550 SLURP2P0DP57 97 aa9.03□□□□□ -0.96
CDC27-215ENST00000573550 MAPTP10636 758 aaKnown RBP9.03□□□□□ -0.96
CDC27-215ENST00000573550 MX2P20592 715 aa9.03□□□□□ -0.96
CDC27-215ENST00000573550 FGFR3P22607 806 aa9.03□□□□□ -0.96
CDC27-215ENST00000573550 CAPN12Q6ZSI9 719 aa9.03□□□□□ -0.96
CDC27-215ENST00000573550 COL26A1Q96A83 441 aa9.03□□□□□ -0.96
CDC27-215ENST00000573550 MKNK1Q9BUB5 465 aa9.03□□□□□ -0.96
CDC27-215ENST00000573550 BCS1LQ9Y276 419 aa9.03□□□□□ -0.96
CDC27-215ENST00000573550 USTQ9Y2C2 406 aa9.03□□□□□ -0.96
CDC27-215ENST00000573550 IGF1RP08069 1367 aa9.02□□□□□ -0.97
CDC27-215ENST00000573550 ADAMTS2O95450 1211 aa9.02□□□□□ -0.97
CDC27-215ENST00000573550 INSM1Q01101 510 aaPredicted RBP9.02□□□□□ -0.97
CDC27-215ENST00000573550 ANKIB1Q9P2G1 1089 aa9.02□□□□□ -0.97
CDC27-215ENST00000573550 LRFN2Q9ULH4 789 aa9.02□□□□□ -0.97
CDC27-215ENST00000573550 KHNYNO15037 678 aaKnown RBP9.01□□□□□ -0.97
CDC27-215ENST00000573550 SSFA2P28290 1259 aa9.01□□□□□ -0.97
CDC27-215ENST00000573550 TYRO3Q06418 890 aa9.01□□□□□ -0.97
CDC27-215ENST00000573550 HIF1AQ16665 826 aa9.01□□□□□ -0.97
CDC27-215ENST00000573550 IER5Q5VY09 327 aa9.01□□□□□ -0.97
CDC27-215ENST00000573550 RETREG2Q8NC44 543 aa9.01□□□□□ -0.97
CDC27-215ENST00000573550 NEUROD4Q9HD90 331 aa9.01□□□□□ -0.97
CDC27-215ENST00000573550 KLK14Q9P0G3 267 aa9.01□□□□□ -0.97
CDC27-215ENST00000573550 TGFBR3LH3BV60 316 aa9□□□□□ -0.97
CDC27-215ENST00000573550 C2CD2LO14523 706 aa9□□□□□ -0.97
CDC27-215ENST00000573550 CTBSQ01459 385 aa9□□□□□ -0.97
CDC27-215ENST00000573550 DGKZQ13574 1117 aa9□□□□□ -0.97
CDC27-215ENST00000573550 COX20Q5RI15 118 aa9□□□□□ -0.97
CDC27-215ENST00000573550 ZSCAN1Q8NBB4 408 aa9□□□□□ -0.97
CDC27-215ENST00000573550 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9□□□□□ -0.974e-7■■■■■ 33.5
CDC27-215ENST00000573550 STRN4Q9NRL3 753 aa9□□□□□ -0.97
CDC27-215ENST00000573550 DMGDHQ9UI17 866 aaKnown RBP9□□□□□ -0.97
CDC27-215ENST00000573550 CD33P20138 364 aa8.99□□□□□ -0.97
CDC27-215ENST00000573550 LAMC2Q13753 1193 aa8.99□□□□□ -0.97
CDC27-215ENST00000573550 FAM182BQ5T319 152 aa8.99□□□□□ -0.97
CDC27-215ENST00000573550 BTLAQ7Z6A9 289 aa8.99□□□□□ -0.97
CDC27-215ENST00000573550 SAP130Q9H0E3 1048 aa8.99□□□□□ -0.97
CDC27-215ENST00000573550 PTCD1O75127 700 aaKnown RBP8.98□□□□□ -0.97
CDC27-215ENST00000573550 SCNN1AP37088 669 aa8.98□□□□□ -0.97
CDC27-215ENST00000573550 PHLDB3Q6NSJ2 640 aa8.98□□□□□ -0.97
CDC27-215ENST00000573550 BRD7Q9NPI1 651 aa8.98□□□□□ -0.97
CDC27-215ENST00000573550 BMP4P12644 408 aa8.97□□□□□ -0.97
CDC27-215ENST00000573550 MAP2K3P46734 347 aa8.97□□□□□ -0.97
CDC27-215ENST00000573550 C11orf91Q3C1V1 193 aa8.97□□□□□ -0.97
CDC27-215ENST00000573550 C16orf46Q6P387 395 aa8.97□□□□□ -0.97
CDC27-215ENST00000573550 WHAMMQ8TF30 809 aa8.97□□□□□ -0.97
CDC27-215ENST00000573550 CEP63Q96MT8 703 aa8.97□□□□□ -0.97
CDC27-215ENST00000573550 MARK1Q9P0L2 795 aa8.97□□□□□ -0.97
CDC27-215ENST00000573550 NSFL1CQ9UNZ2 370 aaKnown RBP8.97□□□□□ -0.97
CDC27-215ENST00000573550 KCNQ4P56696 695 aa8.96□□□□□ -0.98
CDC27-215ENST00000573550 SFSWAPQ12872 951 aaKnown RBP8.96□□□□□ -0.98
CDC27-215ENST00000573550 NAA30Q147X3 362 aaPredicted RBP8.96□□□□□ -0.98
CDC27-215ENST00000573550 GRIN2CQ14957 1233 aa8.96□□□□□ -0.98
CDC27-215ENST00000573550 ZNF385CQ66K41 422 aaPredicted RBP8.96□□□□□ -0.98
CDC27-215ENST00000573550 ACDQ96AP0 544 aa8.96□□□□□ -0.98
CDC27-215ENST00000573550 SEPT3Q9UH03 358 aa8.96□□□□□ -0.98
CDC27-215ENST00000573550 TNFRSF10BO14763 440 aa8.95□□□□□ -0.98
CDC27-215ENST00000573550 FAM26DQ5JW98 314 aa8.95□□□□□ -0.98
CDC27-215ENST00000573550 LYPD4Q6UWN0 246 aa8.95□□□□□ -0.98
CDC27-215ENST00000573550 IFT43Q96FT9 208 aa8.94□□□□□ -0.98
CDC27-215ENST00000573550 OXCT2Q9BYC2 517 aaPredicted RBP8.94□□□□□ -0.98
CDC27-215ENST00000573550 CELA2BP08218 269 aaPredicted RBP8.93□□□□□ -0.98
CDC27-215ENST00000573550 GRNP28799 593 aaKnown RBP8.93□□□□□ -0.98
CDC27-215ENST00000573550 INPP5BP32019 993 aa8.93□□□□□ -0.98
CDC27-215ENST00000573550 IDH3AP50213 366 aa8.93□□□□□ -0.98
CDC27-215ENST00000573550 ETFBKMTQ8IXQ9 262 aa8.93□□□□□ -0.98
CDC27-215ENST00000573550 KCNH4Q9UQ05 1017 aa8.93□□□□□ -0.98
CDC27-215ENST00000573550 MICAL2O94851 1124 aa8.92□□□□□ -0.98
CDC27-215ENST00000573550 ARAFP10398 606 aa8.92□□□□□ -0.98
CDC27-215ENST00000573550 SLC30A3Q99726 388 aa8.92□□□□□ -0.98
CDC27-215ENST00000573550 BRD2P25440 801 aaKnown RBP8.91□□□□□ -0.98
CDC27-215ENST00000573550 ZNF468Q5VIY5 522 aaPredicted RBP8.91□□□□□ -0.98
CDC27-215ENST00000573550 TREML1Q86YW5 311 aa8.91□□□□□ -0.98
CDC27-215ENST00000573550 SVOPQ8N4V2 548 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms