RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 RUNDC1Q96C34 613 aa11.93□□□□□ -0.5
NDE1-207ENST00000573203 WWC3Q9ULE0 1092 aa11.93□□□□□ -0.5
NDE1-207ENST00000573203 ADAMTS8Q9UP79 889 aa11.93□□□□□ -0.5
NDE1-207ENST00000573203 LAMB4A4D0S4 1761 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 UTRNP46939 3433 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 KIAA1551Q9HCM1 1747 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 SCN7AQ01118 1682 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 PXDNLA1KZ92 1463 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 POLRMTO00411 1230 aaKnown RBP11.92□□□□□ -0.5
NDE1-207ENST00000573203 NFIXQ14938 502 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 TBC1D2BQ9UPU7 963 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 RRP7AQ9Y3A4 280 aaKnown RBP11.92□□□□□ -0.5
NDE1-207ENST00000573203 AFDNP55196 1824 aaKnown RBP11.92□□□□□ -0.5
NDE1-207ENST00000573203 A0A0G2JLW4 131 aa11.91□□□□□ -0.5
NDE1-207ENST00000573203 PIP4K2AP48426 406 aaPredicted RBP11.91□□□□□ -0.5
NDE1-207ENST00000573203 BCL2L12Q9HB09 334 aa11.91□□□□□ -0.5
NDE1-207ENST00000573203 TSPYL4Q9UJ04 414 aa11.91□□□□□ -0.5
NDE1-207ENST00000573203 GABBR2O75899 941 aa11.9□□□□□ -0.5
NDE1-207ENST00000573203 EIF4A1P60842 406 aaKnown RBP11.9□□□□□ -0.5
NDE1-207ENST00000573203 BICDL1Q6ZP65 573 aa11.9□□□□□ -0.5
NDE1-207ENST00000573203 DZIP3Q86Y13 1208 aaKnown RBP11.9□□□□□ -0.5
NDE1-207ENST00000573203 BCORQ6W2J9 1755 aa11.9□□□□□ -0.51
NDE1-207ENST00000573203 CCER2I3L3R5 266 aa11.89□□□□□ -0.51
NDE1-207ENST00000573203 GIGYF1O75420 1035 aaPredicted RBP11.89□□□□□ -0.51
NDE1-207ENST00000573203 SERPINB2P05120 415 aa11.89□□□□□ -0.51
NDE1-207ENST00000573203 DPEP1P16444 411 aa11.89□□□□□ -0.51
NDE1-207ENST00000573203 BCS1LQ9Y276 419 aa11.89□□□□□ -0.51
NDE1-207ENST00000573203 BRCA1P38398 1863 aaKnown RBP11.89□□□□□ -0.51
NDE1-207ENST00000573203 NRXN2Q9P2S2 1712 aa11.89□□□□□ -0.51
NDE1-207ENST00000573203 ANP32CO43423 234 aa11.88□□□□□ -0.51
NDE1-207ENST00000573203 CAMTA2O94983 1202 aa11.88□□□□□ -0.51
NDE1-207ENST00000573203 TBC1D9BQ66K14 1250 aa11.88□□□□□ -0.51
NDE1-207ENST00000573203 NBPF26B4DH59 902 aa11.87□□□□□ -0.51
NDE1-207ENST00000573203 NBPF10Q6P3W6 841 aaKnown RBP11.87□□□□□ -0.51
NDE1-207ENST00000573203 NBPF15Q8N660 670 aa11.87□□□□□ -0.51
NDE1-207ENST00000573203 BABAM1Q9NWV8 329 aa11.87□□□□□ -0.51
NDE1-207ENST00000573203 LAS1LQ9Y4W2 734 aaKnown RBP11.87□□□□□ -0.51
NDE1-207ENST00000573203 NPHP1O15259 732 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 CENPBP07199 599 aaPredicted RBP11.86□□□□□ -0.51
NDE1-207ENST00000573203 KCNA3P22001 575 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 CHRNA5P30532 468 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 NGEFQ8N5V2 710 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 ZNF784Q8NCA9 323 aaPredicted RBP11.86□□□□□ -0.51
NDE1-207ENST00000573203 SETDB2Q96T68 719 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 PIM2Q9P1W9 311 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 ZNF652Q9Y2D9 606 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 CARMIL3Q8ND23 1372 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 ARFGEF1Q9Y6D6 1849 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 APAF1O14727 1248 aa11.85□□□□□ -0.51
NDE1-207ENST00000573203 MYL6BP14649 208 aa11.85□□□□□ -0.51
NDE1-207ENST00000573203 NUBP1P53384 320 aa11.85□□□□□ -0.51
NDE1-207ENST00000573203 CCDC184Q52MB2 194 aa11.85□□□□□ -0.51
NDE1-207ENST00000573203 CLEC4GQ6UXB4 293 aa11.85□□□□□ -0.51
NDE1-207ENST00000573203 EIF2S2P20042 333 aaKnown RBP11.84□□□□□ -0.51
NDE1-207ENST00000573203 DALRD3Q5D0E6 543 aaKnown RBP11.84□□□□□ -0.51
NDE1-207ENST00000573203 CNBD1Q8NA66 436 aa11.84□□□□□ -0.51
NDE1-207ENST00000573203 ANKRD31Q8N7Z5 1873 aa11.84□□□□□ -0.51
NDE1-207ENST00000573203 DLEC1Q9Y238 1755 aa11.84□□□□□ -0.51
NDE1-207ENST00000573203 H0YIN7 160 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 CHL1O00533 1208 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 ST5P78524 1137 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 PRR5LQ6MZQ0 368 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 KIF6Q6ZMV9 814 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 ARHGAP27Q6ZUM4 889 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 C2CD5Q86YS7 1000 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 CCDC24Q8N4L8 307 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 MRS2Q9HD23 443 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 NUP98P52948 1817 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 ERBB4Q15303 1308 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 RGL2O15211 777 aa11.82□□□□□ -0.52
NDE1-207ENST00000573203 PDE6BP35913 854 aa11.82□□□□□ -0.52
NDE1-207ENST00000573203 HLFQ16534 295 aa11.82□□□□□ -0.52
NDE1-207ENST00000573203 NBPF5PQ86XG9 351 aaPredicted RBP11.82□□□□□ -0.52
NDE1-207ENST00000573203 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
NDE1-207ENST00000573203 BRIP1Q9BX63 1249 aa11.82□□□□□ -0.52
NDE1-207ENST00000573203 NIP7Q9Y221 180 aaKnown RBP eCLIP11.82□□□□□ -0.52
NDE1-207ENST00000573203 MAP3K15Q6ZN16 1313 aa11.82□□□□□ -0.52
NDE1-207ENST00000573203 ERVV-1B6SEH8 477 aa11.81□□□□□ -0.52
NDE1-207ENST00000573203 CALD1Q05682 793 aaKnown RBP11.81□□□□□ -0.52
NDE1-207ENST00000573203 TTLL7Q6ZT98 887 aa11.81□□□□□ -0.52
NDE1-207ENST00000573203 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
NDE1-207ENST00000573203 CFAP44Q96MT7 982 aa11.81□□□□□ -0.52
NDE1-207ENST00000573203 TSPYL2Q9H2G4 693 aaPredicted RBP11.81□□□□□ -0.52
NDE1-207ENST00000573203 PDZRN3Q9UPQ7 1066 aa11.81□□□□□ -0.52
NDE1-207ENST00000573203 FAM177BA6PVY3 158 aa11.8□□□□□ -0.52
NDE1-207ENST00000573203 KRT24Q2M2I5 525 aa11.8□□□□□ -0.52
NDE1-207ENST00000573203 TTLL6Q8N841 843 aa11.8□□□□□ -0.52
NDE1-207ENST00000573203 ZNF622Q969S3 477 aaKnown RBP eCLIP11.8□□□□□ -0.521e-8■□□□□ 8.5
NDE1-207ENST00000573203 ZBTB3Q9H5J0 574 aa11.8□□□□□ -0.52
NDE1-207ENST00000573203 COL11A2P13942 1736 aaPredicted RBP11.8□□□□□ -0.52
NDE1-207ENST00000573203 ATP10DQ9P241 1426 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 CACNA1SQ13698 1873 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 ANXA1P04083 346 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 GTF2E1P29083 439 aaPredicted RBP11.79□□□□□ -0.52
NDE1-207ENST00000573203 GNAI1P63096 354 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 PDIA6Q15084 440 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 TPTE2Q6XPS3 522 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 FAM212AQ96EL1 285 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms