RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 INTS5Q6P9B9 1019 aaKnown RBP10.16□□□□□ -0.78
SMG6-211ENST00000572369 ZBTB1Q9Y2K1 713 aa10.16□□□□□ -0.78
SMG6-211ENST00000572369 LAMB4A4D0S4 1761 aa10.16□□□□□ -0.78
SMG6-211ENST00000572369 CUL9Q8IWT3 2517 aa10.15□□□□□ -0.78
SMG6-211ENST00000572369 ZC3H4Q9UPT8 1303 aaKnown RBP10.15□□□□□ -0.78
SMG6-211ENST00000572369 ARFGEF1Q9Y6D6 1849 aa10.15□□□□□ -0.78
SMG6-211ENST00000572369 SOX10P56693 466 aa10.15□□□□□ -0.78
SMG6-211ENST00000572369 TGFB2P61812 414 aa10.15□□□□□ -0.78
SMG6-211ENST00000572369 A0A0C4DFX4 3053 aa10.15□□□□□ -0.79
SMG6-211ENST00000572369 BRCA1P38398 1863 aaKnown RBP10.15□□□□□ -0.79
SMG6-211ENST00000572369 COL15A1P39059 1388 aa10.14□□□□□ -0.79
SMG6-211ENST00000572369 A0A087WZG4 1122 aa10.14□□□□□ -0.79
SMG6-211ENST00000572369 A0A0G2JLW4 131 aa10.14□□□□□ -0.79
SMG6-211ENST00000572369 PRAMEF22A3QJZ6 481 aa10.14□□□□□ -0.79
SMG6-211ENST00000572369 GLTPD2A6NH11 291 aa10.14□□□□□ -0.79
SMG6-211ENST00000572369 A1BGP04217 495 aa10.14□□□□□ -0.79
SMG6-211ENST00000572369 CALD1Q05682 793 aaKnown RBP10.14□□□□□ -0.79
SMG6-211ENST00000572369 NLGN1Q8N2Q7 840 aa10.14□□□□□ -0.79
SMG6-211ENST00000572369 TRIM35Q9UPQ4 493 aa10.14□□□□□ -0.79
SMG6-211ENST00000572369 USP16Q9Y5T5 823 aa10.14□□□□□ -0.79
SMG6-211ENST00000572369 SOS1Q07889 1333 aaPredicted RBP10.13□□□□□ -0.79
SMG6-211ENST00000572369 EIF4A1P60842 406 aaKnown RBP10.13□□□□□ -0.79
SMG6-211ENST00000572369 USPL1Q5W0Q7 1092 aa10.13□□□□□ -0.79
SMG6-211ENST00000572369 CHADLQ6NUI6 762 aa10.13□□□□□ -0.79
SMG6-211ENST00000572369 BABAM1Q9NWV8 329 aa10.13□□□□□ -0.79
SMG6-211ENST00000572369 SRP68Q9UHB9 627 aaKnown RBP10.13□□□□□ -0.79
SMG6-211ENST00000572369 SALL2Q9Y467 1007 aaPredicted RBP10.13□□□□□ -0.79
SMG6-211ENST00000572369 USP42Q9H9J4 1324 aaKnown RBP10.12□□□□□ -0.79
SMG6-211ENST00000572369 THSD7BQ9C0I4 1608 aa10.12□□□□□ -0.79
SMG6-211ENST00000572369 MMP10P09238 476 aa10.12□□□□□ -0.79
SMG6-211ENST00000572369 GYS1P13807 737 aa10.12□□□□□ -0.79
SMG6-211ENST00000572369 IL6STP40189 918 aaPredicted RBP10.12□□□□□ -0.79
SMG6-211ENST00000572369 PIP4K2AP48426 406 aaPredicted RBP10.12□□□□□ -0.79
SMG6-211ENST00000572369 DIEXFQ68CQ4 756 aaKnown RBP10.12□□□□□ -0.79
SMG6-211ENST00000572369 PARP3Q9Y6F1 533 aa10.12□□□□□ -0.79
SMG6-211ENST00000572369 PASKQ96RG2 1323 aa10.11□□□□□ -0.79
SMG6-211ENST00000572369 SBF1O95248 1867 aa10.11□□□□□ -0.79
SMG6-211ENST00000572369 EIF2S2P20042 333 aaKnown RBP10.11□□□□□ -0.79
SMG6-211ENST00000572369 FXR1P51114 621 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMG6-211ENST00000572369 GNAI1P63096 354 aa10.11□□□□□ -0.79
SMG6-211ENST00000572369 NGEFQ8N5V2 710 aa10.11□□□□□ -0.79
SMG6-211ENST00000572369 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
SMG6-211ENST00000572369 NARFQ9UHQ1 456 aa10.11□□□□□ -0.79
SMG6-211ENST00000572369 TBC1D2BQ9UPU7 963 aa10.11□□□□□ -0.79
SMG6-211ENST00000572369 WDR33Q9C0J8 1336 aaKnown RBP10.1□□□□□ -0.79
SMG6-211ENST00000572369 TMEM88BA6NKF7 163 aa10.1□□□□□ -0.79
SMG6-211ENST00000572369 POTECB2RU33 542 aa10.1□□□□□ -0.79
SMG6-211ENST00000572369 CHL1O00533 1208 aa10.1□□□□□ -0.79
SMG6-211ENST00000572369 MYL6BP14649 208 aa10.1□□□□□ -0.79
SMG6-211ENST00000572369 DPEP1P16444 411 aa10.1□□□□□ -0.79
SMG6-211ENST00000572369 EIF5P55010 431 aaKnown RBP10.1□□□□□ -0.79
SMG6-211ENST00000572369 DGKZQ13574 1117 aa10.1□□□□□ -0.79
SMG6-211ENST00000572369 FKBP8Q14318 412 aa10.1□□□□□ -0.79
SMG6-211ENST00000572369 BICDL1Q6ZP65 573 aa10.1□□□□□ -0.79
SMG6-211ENST00000572369 DZIP3Q86Y13 1208 aaKnown RBP10.1□□□□□ -0.79
SMG6-211ENST00000572369 SLC17A8Q8NDX2 589 aa10.1□□□□□ -0.79
SMG6-211ENST00000572369 NECTIN2Q92692 538 aa10.1□□□□□ -0.79
SMG6-211ENST00000572369 ZNF219Q9P2Y4 722 aaPredicted RBP10.1□□□□□ -0.79
SMG6-211ENST00000572369 LTBP1Q14766 1721 aa10.1□□□□□ -0.79
SMG6-211ENST00000572369 SCN7AQ01118 1682 aa10.09□□□□□ -0.79
SMG6-211ENST00000572369 RASSF10A6NK89 507 aa10.09□□□□□ -0.79
SMG6-211ENST00000572369 NPHP1O15259 732 aa10.09□□□□□ -0.79
SMG6-211ENST00000572369 NBPF15Q8N660 670 aa10.09□□□□□ -0.79
SMG6-211ENST00000572369 IFT57Q9NWB7 429 aa10.09□□□□□ -0.79
SMG6-211ENST00000572369 BCORQ6W2J9 1755 aa10.09□□□□□ -0.79
SMG6-211ENST00000572369 TIAM2Q8IVF5 1701 aa10.08□□□□□ -0.8
SMG6-211ENST00000572369 CCER2I3L3R5 266 aa10.08□□□□□ -0.8
SMG6-211ENST00000572369 CCDC27Q2M243 656 aa10.08□□□□□ -0.8
SMG6-211ENST00000572369 DEFB115Q30KQ5 88 aa10.08□□□□□ -0.8
SMG6-211ENST00000572369 KIF6Q6ZMV9 814 aa10.08□□□□□ -0.8
SMG6-211ENST00000572369 MBIPQ9NS73 344 aa10.08□□□□□ -0.8
SMG6-211ENST00000572369 TSKSQ9UJT2 592 aa10.08□□□□□ -0.8
SMG6-211ENST00000572369 ZNF652Q9Y2D9 606 aa10.08□□□□□ -0.8
SMG6-211ENST00000572369 AFDNP55196 1824 aaKnown RBP10.07□□□□□ -0.8
SMG6-211ENST00000572369 NBPF26B4DH59 902 aa10.07□□□□□ -0.8
SMG6-211ENST00000572369 POTEIP0CG38 1075 aa10.07□□□□□ -0.8
SMG6-211ENST00000572369 POTEJP0CG39 1038 aa10.07□□□□□ -0.8
SMG6-211ENST00000572369 KRT24Q2M2I5 525 aa10.07□□□□□ -0.8
SMG6-211ENST00000572369 HDGFL1Q5TGJ6 251 aa10.07□□□□□ -0.8
SMG6-211ENST00000572369 NBPF10Q6P3W6 841 aaKnown RBP10.07□□□□□ -0.8
SMG6-211ENST00000572369 WWC1Q8IX03 1113 aa10.07□□□□□ -0.8
SMG6-211ENST00000572369 ERBB4Q15303 1308 aa10.07□□□□□ -0.8
SMG6-211ENST00000572369 ELL2O00472 640 aaPredicted RBP10.06□□□□□ -0.8
SMG6-211ENST00000572369 NFIXQ14938 502 aa10.06□□□□□ -0.8
SMG6-211ENST00000572369 DUSP27Q5VZP5 1158 aa10.06□□□□□ -0.8
SMG6-211ENST00000572369 TBC1D9BQ66K14 1250 aa10.06□□□□□ -0.8
SMG6-211ENST00000572369 SETDB2Q96T68 719 aa10.06□□□□□ -0.8
SMG6-211ENST00000572369 NUP98P52948 1817 aa10.05□□□□□ -0.8
SMG6-211ENST00000572369 SZT2Q5T011 3432 aa10.05□□□□□ -0.8
SMG6-211ENST00000572369 POLRMTO00411 1230 aaKnown RBP10.05□□□□□ -0.8
SMG6-211ENST00000572369 CAMTA2O94983 1202 aa10.05□□□□□ -0.8
SMG6-211ENST00000572369 SERPINB2P05120 415 aa10.05□□□□□ -0.8
SMG6-211ENST00000572369 HOXB7P09629 217 aa10.05□□□□□ -0.8
SMG6-211ENST00000572369 ZNF853P0CG23 659 aa10.05□□□□□ -0.8
SMG6-211ENST00000572369 KCNA3P22001 575 aa10.05□□□□□ -0.8
SMG6-211ENST00000572369 TM4SF1P30408 202 aa10.05□□□□□ -0.8
SMG6-211ENST00000572369 DDR1Q08345 913 aa10.05□□□□□ -0.8
SMG6-211ENST00000572369 AIMP1Q12904 312 aaKnown RBP10.05□□□□□ -0.8
SMG6-211ENST00000572369 NCBP3Q53F19 620 aaKnown RBP10.05□□□□□ -0.8
SMG6-211ENST00000572369 DALRD3Q5D0E6 543 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms