RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 MYL6BP14649 208 aa18.03■□□□□ 0.48
RPAIN-211ENST00000572174 PIP4K2AP48426 406 aaPredicted RBP18.03■□□□□ 0.48
RPAIN-211ENST00000572174 DDR1Q08345 913 aa18.03■□□□□ 0.48
RPAIN-211ENST00000572174 PDZRN3Q9UPQ7 1066 aa18.03■□□□□ 0.48
RPAIN-211ENST00000572174 MYH16Q9H6N6 1097 aa18.02■□□□□ 0.48
RPAIN-211ENST00000572174 ATP10DQ9P241 1426 aa18.02■□□□□ 0.48
RPAIN-211ENST00000572174 ANKRD31Q8N7Z5 1873 aa18.01■□□□□ 0.47
RPAIN-211ENST00000572174 SERPINB2P05120 415 aa18.01■□□□□ 0.47
RPAIN-211ENST00000572174 GPR162Q16538 588 aa18.01■□□□□ 0.47
RPAIN-211ENST00000572174 TBC1D9BQ66K14 1250 aa18.01■□□□□ 0.47
RPAIN-211ENST00000572174 NLGN2Q8NFZ4 835 aa18.01■□□□□ 0.47
RPAIN-211ENST00000572174 HYPKQ9NX55 129 aa18.01■□□□□ 0.47
RPAIN-211ENST00000572174 ARFGEF2Q9Y6D5 1785 aa18.01■□□□□ 0.47
RPAIN-211ENST00000572174 PXDNLA1KZ92 1463 aa18.01■□□□□ 0.47
RPAIN-211ENST00000572174 GRIN3BO60391 1043 aa18■□□□□ 0.47
RPAIN-211ENST00000572174 ST5P78524 1137 aa18■□□□□ 0.47
RPAIN-211ENST00000572174 HSP90AB3PQ58FF7 597 aa18■□□□□ 0.47
RPAIN-211ENST00000572174 CCDC30Q5VVM6 783 aa18■□□□□ 0.47
RPAIN-211ENST00000572174 BICDL1Q6ZP65 573 aa18■□□□□ 0.47
RPAIN-211ENST00000572174 CNBD1Q8NA66 436 aa18■□□□□ 0.47
RPAIN-211ENST00000572174 GOLGA2Q08379 1002 aa17.99■□□□□ 0.47
RPAIN-211ENST00000572174 NYXQ9GZU5 481 aa17.99■□□□□ 0.47
RPAIN-211ENST00000572174 NIP7Q9Y221 180 aaKnown RBP eCLIP17.99■□□□□ 0.47
RPAIN-211ENST00000572174 SALL2Q9Y467 1007 aaPredicted RBP17.99■□□□□ 0.47
RPAIN-211ENST00000572174 IBTKQ9P2D0 1353 aaPredicted RBP17.99■□□□□ 0.47
RPAIN-211ENST00000572174 PDIA6Q15084 440 aa17.98■□□□□ 0.47
RPAIN-211ENST00000572174 KRT24Q2M2I5 525 aa17.98■□□□□ 0.47
RPAIN-211ENST00000572174 NBPF5PQ86XG9 351 aaPredicted RBP17.98■□□□□ 0.47
RPAIN-211ENST00000572174 STK31Q9BXU1 1019 aa17.98■□□□□ 0.47
RPAIN-211ENST00000572174 CHPF2Q9P2E5 772 aa17.98■□□□□ 0.47
RPAIN-211ENST00000572174 FANCIQ9NVI1 1328 aa17.98■□□□□ 0.47
RPAIN-211ENST00000572174 PDE6BP35913 854 aa17.97■□□□□ 0.47
RPAIN-211ENST00000572174 TPTE2Q6XPS3 522 aa17.97■□□□□ 0.47
RPAIN-211ENST00000572174 GIGYF2Q6Y7W6 1299 aaKnown RBP17.97■□□□□ 0.47
RPAIN-211ENST00000572174 PELP1Q8IZL8 1130 aaKnown RBP17.97■□□□□ 0.47
RPAIN-211ENST00000572174 NECTIN2Q92692 538 aa17.97■□□□□ 0.47
RPAIN-211ENST00000572174 TSR2Q969E8 191 aaKnown RBP17.97■□□□□ 0.47
RPAIN-211ENST00000572174 TWISTNBQ3B726 338 aaPredicted RBP17.96■□□□□ 0.47
RPAIN-211ENST00000572174 PARP10Q53GL7 1025 aa17.96■□□□□ 0.47
RPAIN-211ENST00000572174 TTLL7Q6ZT98 887 aa17.96■□□□□ 0.47
RPAIN-211ENST00000572174 CACNA1SQ13698 1873 aa17.96■□□□□ 0.47
RPAIN-211ENST00000572174 RNF123Q5XPI4 1314 aa17.96■□□□□ 0.46
RPAIN-211ENST00000572174 DDX58O95786 925 aaKnown RBP17.95■□□□□ 0.46
RPAIN-211ENST00000572174 COPS6Q7L5N1 327 aa17.95■□□□□ 0.46
RPAIN-211ENST00000572174 LRP10Q7Z4F1 713 aa17.95■□□□□ 0.46
RPAIN-211ENST00000572174 C8orf58Q8NAV2 365 aa17.95■□□□□ 0.46
RPAIN-211ENST00000572174 XAGE3Q8WTP9 111 aa17.95■□□□□ 0.46
RPAIN-211ENST00000572174 BRIP1Q9BX63 1249 aa17.95■□□□□ 0.46
RPAIN-211ENST00000572174 ZBTB3Q9H5J0 574 aa17.95■□□□□ 0.46
RPAIN-211ENST00000572174 ELL2O00472 640 aaPredicted RBP17.94■□□□□ 0.46
RPAIN-211ENST00000572174 GTF2E1P29083 439 aaPredicted RBP17.94■□□□□ 0.46
RPAIN-211ENST00000572174 PROSER3Q2NL68 480 aa17.94■□□□□ 0.46
RPAIN-211ENST00000572174 PRR5LQ6MZQ0 368 aa17.94■□□□□ 0.46
RPAIN-211ENST00000572174 PPP1R42Q7Z4L9 355 aa17.94■□□□□ 0.46
RPAIN-211ENST00000572174 PLBD2Q8NHP8 589 aa17.94■□□□□ 0.46
RPAIN-211ENST00000572174 PIM2Q9P1W9 311 aa17.94■□□□□ 0.46
RPAIN-211ENST00000572174 COL11A2P13942 1736 aaPredicted RBP17.94■□□□□ 0.46
RPAIN-211ENST00000572174 ZNF521Q96K83 1311 aa17.94■□□□□ 0.46
RPAIN-211ENST00000572174 RIC1Q4ADV7 1423 aa17.93■□□□□ 0.46
RPAIN-211ENST00000572174 H0YIN7 160 aa17.93■□□□□ 0.46
RPAIN-211ENST00000572174 AIMP1Q12904 312 aaKnown RBP17.93■□□□□ 0.46
RPAIN-211ENST00000572174 HLFQ16534 295 aa17.93■□□□□ 0.46
RPAIN-211ENST00000572174 MIER1Q8N108 512 aa17.93■□□□□ 0.46
RPAIN-211ENST00000572174 SENP3-EIF4A1A0A087X0R7 540 aa17.92■□□□□ 0.46
RPAIN-211ENST00000572174 E9PSI1 815 aa17.92■□□□□ 0.46
RPAIN-211ENST00000572174 ANXA1P04083 346 aa17.92■□□□□ 0.46
RPAIN-211ENST00000572174 DPEP1P16444 411 aa17.92■□□□□ 0.46
RPAIN-211ENST00000572174 ANKRD13DQ6ZTN6 518 aa17.92■□□□□ 0.46
RPAIN-211ENST00000572174 LAMB2P55268 1798 aa17.91■□□□□ 0.46
RPAIN-211ENST00000572174 A0A0G2JLW4 131 aa17.91■□□□□ 0.46
RPAIN-211ENST00000572174 ZNF34Q8IZ26 560 aa17.91■□□□□ 0.46
RPAIN-211ENST00000572174 DALRD3Q5D0E6 543 aaKnown RBP17.9■□□□□ 0.46
RPAIN-211ENST00000572174 TSPYL6Q8N831 410 aa17.9■□□□□ 0.46
RPAIN-211ENST00000572174 YBX3P16989 372 aaKnown RBP eCLIP17.89■□□□□ 0.45
RPAIN-211ENST00000572174 TCIRG1Q13488 830 aa17.89■□□□□ 0.45
RPAIN-211ENST00000572174 RIC3Q7Z5B4 369 aa17.89■□□□□ 0.45
RPAIN-211ENST00000572174 C2CD5Q86YS7 1000 aa17.89■□□□□ 0.45
RPAIN-211ENST00000572174 BCS1LQ9Y276 419 aa17.89■□□□□ 0.45
RPAIN-211ENST00000572174 HSP90B1P14625 803 aaKnown RBP17.88■□□□□ 0.45
RPAIN-211ENST00000572174 GPTP24298 496 aa17.88■□□□□ 0.45
RPAIN-211ENST00000572174 EXOSC9Q06265 439 aaKnown RBP17.88■□□□□ 0.45
RPAIN-211ENST00000572174 ZNF428Q96B54 188 aa17.88■□□□□ 0.45
RPAIN-211ENST00000572174 UTP14AQ9BVJ6 771 aaKnown RBP17.88■□□□□ 0.45
RPAIN-211ENST00000572174 MYH3P11055 1940 aa17.88■□□□□ 0.45
RPAIN-211ENST00000572174 STYK1Q6J9G0 422 aa17.87■□□□□ 0.45
RPAIN-211ENST00000572174 TTLL6Q8N841 843 aa17.87■□□□□ 0.45
RPAIN-211ENST00000572174 CNKSR1Q969H4 720 aa17.87■□□□□ 0.45
RPAIN-211ENST00000572174 MASTLQ96GX5 879 aa17.87■□□□□ 0.45
RPAIN-211ENST00000572174 UBN2Q6ZU65 1347 aa17.87■□□□□ 0.45
RPAIN-211ENST00000572174 FAM177BA6PVY3 158 aa17.86■□□□□ 0.45
RPAIN-211ENST00000572174 KCNA3P22001 575 aa17.86■□□□□ 0.45
RPAIN-211ENST00000572174 CHRNA5P30532 468 aa17.86■□□□□ 0.45
RPAIN-211ENST00000572174 TNRC6CQ9HCJ0 1690 aaKnown RBP17.86■□□□□ 0.45
RPAIN-211ENST00000572174 VAMP4O75379 141 aa17.85■□□□□ 0.45
RPAIN-211ENST00000572174 SBF1O95248 1867 aa17.85■□□□□ 0.45
RPAIN-211ENST00000572174 CT47B1P0C2W7 299 aaPredicted RBP17.85■□□□□ 0.45
RPAIN-211ENST00000572174 NPR1P16066 1061 aa17.85■□□□□ 0.45
RPAIN-211ENST00000572174 YY1P25490 414 aa17.85■□□□□ 0.45
RPAIN-211ENST00000572174 NEXNQ0ZGT2 675 aa17.85■□□□□ 0.45
RPAIN-211ENST00000572174 CCDC88AQ3V6T2 1871 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms