RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 WDR90Q96KV7 1748 aa21.97■■□□□ 1.11
RAB40B-205ENST00000571880 HSPA6P17066 643 aa21.97■■□□□ 1.11
RAB40B-205ENST00000571880 NGEFQ8N5V2 710 aa21.97■■□□□ 1.11
RAB40B-205ENST00000571880 NFKBIEO00221 500 aa21.95■■□□□ 1.1
RAB40B-205ENST00000571880 ST5P78524 1137 aa21.95■■□□□ 1.1
RAB40B-205ENST00000571880 C21orf2O43822 256 aa21.94■■□□□ 1.1
RAB40B-205ENST00000571880 PDE6BP35913 854 aa21.94■■□□□ 1.1
RAB40B-205ENST00000571880 NBPF5PQ86XG9 351 aaPredicted RBP21.94■■□□□ 1.1
RAB40B-205ENST00000571880 BRIP1Q9BX63 1249 aa21.94■■□□□ 1.1
RAB40B-205ENST00000571880 HLFQ16534 295 aa21.92■■□□□ 1.1
RAB40B-205ENST00000571880 CCDC146Q8IYE0 955 aa21.92■■□□□ 1.1
RAB40B-205ENST00000571880 RRAGCQ9HB90 399 aa21.92■■□□□ 1.1
RAB40B-205ENST00000571880 NIP7Q9Y221 180 aaKnown RBP eCLIP21.92■■□□□ 1.1
RAB40B-205ENST00000571880 ZNF652Q9Y2D9 606 aa21.92■■□□□ 1.1
RAB40B-205ENST00000571880 RRP7AQ9Y3A4 280 aaKnown RBP21.92■■□□□ 1.1
RAB40B-205ENST00000571880 KDM2BQ8NHM5 1336 aa21.91■■□□□ 1.1
RAB40B-205ENST00000571880 LMNB1P20700 586 aa21.91■■□□□ 1.1
RAB40B-205ENST00000571880 C16orf71Q8IYS4 520 aaPredicted RBP21.91■■□□□ 1.1
RAB40B-205ENST00000571880 ANKRD36CQ5JPF3 1778 aa21.9■■□□□ 1.1
RAB40B-205ENST00000571880 TOMM70O94826 608 aa21.9■■□□□ 1.1
RAB40B-205ENST00000571880 MYL6BP14649 208 aa21.9■■□□□ 1.1
RAB40B-205ENST00000571880 EIF4A1P60842 406 aaKnown RBP21.9■■□□□ 1.1
RAB40B-205ENST00000571880 RALBP1Q15311 655 aa21.89■■□□□ 1.09
RAB40B-205ENST00000571880 PRPF40BQ6NWY9 871 aaKnown RBP21.89■■□□□ 1.09
RAB40B-205ENST00000571880 ABCC12Q96J65 1359 aa21.88■■□□□ 1.09
RAB40B-205ENST00000571880 TTLL7Q6ZT98 887 aa21.88■■□□□ 1.09
RAB40B-205ENST00000571880 PNISRQ8TF01 805 aaKnown RBP21.88■■□□□ 1.09
RAB40B-205ENST00000571880 TSPYL4Q9UJ04 414 aa21.88■■□□□ 1.09
RAB40B-205ENST00000571880 MYBBP1AQ9BQG0 1328 aaKnown RBP21.87■■□□□ 1.09
RAB40B-205ENST00000571880 SRGNP10124 158 aa21.87■■□□□ 1.09
RAB40B-205ENST00000571880 RIPK4P57078 832 aa21.87■■□□□ 1.09
RAB40B-205ENST00000571880 ZBTB3Q9H5J0 574 aa21.87■■□□□ 1.09
RAB40B-205ENST00000571880 HTRA3P83110 453 aa21.86■■□□□ 1.09
RAB40B-205ENST00000571880 NEUROD2Q15784 382 aa21.86■■□□□ 1.09
RAB40B-205ENST00000571880 CLEC4GQ6UXB4 293 aa21.86■■□□□ 1.09
RAB40B-205ENST00000571880 LAMB2P55268 1798 aa21.86■■□□□ 1.09
RAB40B-205ENST00000571880 GPTP24298 496 aa21.85■■□□□ 1.09
RAB40B-205ENST00000571880 STYK1Q6J9G0 422 aa21.85■■□□□ 1.09
RAB40B-205ENST00000571880 OLFM4Q6UX06 510 aa21.85■■□□□ 1.09
RAB40B-205ENST00000571880 MASTLQ96GX5 879 aa21.85■■□□□ 1.09
RAB40B-205ENST00000571880 PNNQ9H307 717 aaKnown RBP21.85■■□□□ 1.09
RAB40B-205ENST00000571880 ANXA1P04083 346 aa21.84■■□□□ 1.09
RAB40B-205ENST00000571880 TMPOP42166 694 aaKnown RBP21.84■■□□□ 1.09
RAB40B-205ENST00000571880 KIF6Q6ZMV9 814 aa21.84■■□□□ 1.09
RAB40B-205ENST00000571880 NUTM1Q86Y26 1132 aa21.84■■□□□ 1.09
RAB40B-205ENST00000571880 RBM46Q8TBY0 533 aaKnown RBP21.84■■□□□ 1.09
RAB40B-205ENST00000571880 CNKSR1Q969H4 720 aa21.84■■□□□ 1.09
RAB40B-205ENST00000571880 TAOK3Q9H2K8 898 aa21.84■■□□□ 1.09
RAB40B-205ENST00000571880 PDZRN3Q9UPQ7 1066 aa21.84■■□□□ 1.09
RAB40B-205ENST00000571880 MAP3K15Q6ZN16 1313 aa21.83■■□□□ 1.09
RAB40B-205ENST00000571880 EIF2S2P20042 333 aaKnown RBP21.83■■□□□ 1.09
RAB40B-205ENST00000571880 NECTIN2Q92692 538 aa21.83■■□□□ 1.09
RAB40B-205ENST00000571880 ZC3H4Q9UPT8 1303 aaKnown RBP21.82■■□□□ 1.08
RAB40B-205ENST00000571880 GTF2E1P29083 439 aaPredicted RBP21.82■■□□□ 1.08
RAB40B-205ENST00000571880 ERFEQ4G0M1 354 aa21.82■■□□□ 1.08
RAB40B-205ENST00000571880 UBN2Q6ZU65 1347 aa21.81■■□□□ 1.08
RAB40B-205ENST00000571880 GLTPD2A6NH11 291 aa21.81■■□□□ 1.08
RAB40B-205ENST00000571880 APLP1P51693 650 aa21.81■■□□□ 1.08
RAB40B-205ENST00000571880 PROSER3Q2NL68 480 aa21.81■■□□□ 1.08
RAB40B-205ENST00000571880 TPTE2Q6XPS3 522 aa21.81■■□□□ 1.08
RAB40B-205ENST00000571880 NPR1P16066 1061 aa21.8■■□□□ 1.08
RAB40B-205ENST00000571880 WDR43Q15061 677 aaKnown RBP eCLIP21.8■■□□□ 1.08
RAB40B-205ENST00000571880 KRT24Q2M2I5 525 aa21.8■■□□□ 1.08
RAB40B-205ENST00000571880 SLC51AQ86UW1 340 aa21.8■■□□□ 1.08
RAB40B-205ENST00000571880 LAS1LQ9Y4W2 734 aaKnown RBP21.8■■□□□ 1.08
RAB40B-205ENST00000571880 TAF1P21675 1872 aa21.79■■□□□ 1.08
RAB40B-205ENST00000571880 LTBP3Q9NS15 1303 aa21.78■■□□□ 1.08
RAB40B-205ENST00000571880 LMOD3Q0VAK6 560 aa21.77■■□□□ 1.08
RAB40B-205ENST00000571880 CCDC93Q567U6 631 aa21.77■■□□□ 1.08
RAB40B-205ENST00000571880 ZNF428Q96B54 188 aa21.77■■□□□ 1.08
RAB40B-205ENST00000571880 ERVV-1B6SEH8 477 aa21.76■■□□□ 1.07
RAB40B-205ENST00000571880 ZNF277Q9NRM2 450 aaPredicted RBP21.76■■□□□ 1.07
RAB40B-205ENST00000571880 RGL2O15211 777 aa21.75■■□□□ 1.07
RAB40B-205ENST00000571880 VEGFAP15692 232 aaPredicted RBP21.75■■□□□ 1.07
RAB40B-205ENST00000571880 SUSD4Q5VX71 490 aa21.75■■□□□ 1.07
RAB40B-205ENST00000571880 SMC1BQ8NDV3 1235 aa21.75■■□□□ 1.07
RAB40B-205ENST00000571880 C7orf43Q8WVR3 580 aa21.75■■□□□ 1.07
RAB40B-205ENST00000571880 KLRG2A4D1S0 409 aaPredicted RBP21.74■■□□□ 1.07
RAB40B-205ENST00000571880 POTECB2RU33 542 aa21.74■■□□□ 1.07
RAB40B-205ENST00000571880 DDNO94850 711 aaPredicted RBP21.74■■□□□ 1.07
RAB40B-205ENST00000571880 FSTL1Q12841 308 aa21.74■■□□□ 1.07
RAB40B-205ENST00000571880 PDIA6Q15084 440 aa21.74■■□□□ 1.07
RAB40B-205ENST00000571880 SOGA3Q5TF21 947 aa21.74■■□□□ 1.07
RAB40B-205ENST00000571880 C3orf67Q6ZVT6 689 aa21.74■■□□□ 1.07
RAB40B-205ENST00000571880 LRP10Q7Z4F1 713 aa21.74■■□□□ 1.07
RAB40B-205ENST00000571880 RUNDC1Q96C34 613 aa21.74■■□□□ 1.07
RAB40B-205ENST00000571880 NYXQ9GZU5 481 aa21.74■■□□□ 1.07
RAB40B-205ENST00000571880 ADAMTS8Q9UP79 889 aa21.74■■□□□ 1.07
RAB40B-205ENST00000571880 TRIM35Q9UPQ4 493 aa21.74■■□□□ 1.07
RAB40B-205ENST00000571880 ERBB4Q15303 1308 aa21.74■■□□□ 1.07
RAB40B-205ENST00000571880 SCN4AP35499 1836 aa21.73■■□□□ 1.07
RAB40B-205ENST00000571880 TCERG1O14776 1098 aaKnown RBP21.73■■□□□ 1.07
RAB40B-205ENST00000571880 NTSR2O95665 410 aa21.73■■□□□ 1.07
RAB40B-205ENST00000571880 AIMP1Q12904 312 aaKnown RBP21.73■■□□□ 1.07
RAB40B-205ENST00000571880 ZNF541Q9H0D2 1346 aa21.73■■□□□ 1.07
RAB40B-205ENST00000571880 IBTKQ9P2D0 1353 aaPredicted RBP21.73■■□□□ 1.07
RAB40B-205ENST00000571880 COL4A5P29400 1685 aa21.72■■□□□ 1.07
RAB40B-205ENST00000571880 DDX60Q8IY21 1712 aaKnown RBP21.72■■□□□ 1.07
RAB40B-205ENST00000571880 DPY19L2Q6NUT2 758 aa21.72■■□□□ 1.07
RAB40B-205ENST00000571880 GIGYF2Q6Y7W6 1299 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms