RNA–Protein interactions for RNA: ENST00000571543.1

ABR-213, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-213ENST00000571543 CCDC24Q8N4L8 307 aa27.42■■□□□ 1.98
ABR-213ENST00000571543 ZNF652Q9Y2D9 606 aa27.42■■□□□ 1.98
ABR-213ENST00000571543 LAS1LQ9Y4W2 734 aaKnown RBP27.41■■□□□ 1.98
ABR-213ENST00000571543 KIF3CO14782 793 aa27.4■■□□□ 1.98
ABR-213ENST00000571543 C2CD5Q86YS7 1000 aa27.4■■□□□ 1.98
ABR-213ENST00000571543 CACNA1SQ13698 1873 aa27.4■■□□□ 1.98
ABR-213ENST00000571543 CHL1O00533 1208 aa27.39■■□□□ 1.98
ABR-213ENST00000571543 APAF1O14727 1248 aa27.39■■□□□ 1.98
ABR-213ENST00000571543 MYL6BP14649 208 aa27.39■■□□□ 1.98
ABR-213ENST00000571543 EIF2S2P20042 333 aaKnown RBP27.38■■□□□ 1.97
ABR-213ENST00000571543 HLFQ16534 295 aa27.38■■□□□ 1.97
ABR-213ENST00000571543 CNBD1Q8NA66 436 aa27.38■■□□□ 1.97
ABR-213ENST00000571543 BRIP1Q9BX63 1249 aa27.38■■□□□ 1.97
ABR-213ENST00000571543 H0YIN7 160 aa27.37■■□□□ 1.97
ABR-213ENST00000571543 RGL2O15211 777 aa27.37■■□□□ 1.97
ABR-213ENST00000571543 NPHP1O15259 732 aa27.37■■□□□ 1.97
ABR-213ENST00000571543 TTLL7Q6ZT98 887 aa27.36■■□□□ 1.97
ABR-213ENST00000571543 NIP7Q9Y221 180 aaKnown RBP eCLIP27.36■■□□□ 1.97
ABR-213ENST00000571543 TIAM2Q8IVF5 1701 aa27.36■■□□□ 1.97
ABR-213ENST00000571543 PDE6BP35913 854 aa27.35■■□□□ 1.97
ABR-213ENST00000571543 C9orf131Q5VYM1 1079 aa27.35■■□□□ 1.97
ABR-213ENST00000571543 NBPF5PQ86XG9 351 aaPredicted RBP27.35■■□□□ 1.97
ABR-213ENST00000571543 ERBB4Q15303 1308 aa27.35■■□□□ 1.97
ABR-213ENST00000571543 TNRC6CQ9HCJ0 1690 aaKnown RBP27.34■■□□□ 1.97
ABR-213ENST00000571543 ANP32CO43423 234 aa27.34■■□□□ 1.97
ABR-213ENST00000571543 ST5P78524 1137 aa27.34■■□□□ 1.97
ABR-213ENST00000571543 KRT24Q2M2I5 525 aa27.34■■□□□ 1.97
ABR-213ENST00000571543 ERVV-1B6SEH8 477 aa27.33■■□□□ 1.97
ABR-213ENST00000571543 KIF6Q6ZMV9 814 aa27.33■■□□□ 1.97
ABR-213ENST00000571543 TTLL6Q8N841 843 aa27.33■■□□□ 1.97
ABR-213ENST00000571543 MAP3K15Q6ZN16 1313 aa27.33■■□□□ 1.97
ABR-213ENST00000571543 PDIA6Q15084 440 aa27.32■■□□□ 1.96
ABR-213ENST00000571543 NECTIN2Q92692 538 aa27.32■■□□□ 1.96
ABR-213ENST00000571543 ZNF622Q969S3 477 aaKnown RBP eCLIP27.32■■□□□ 1.96
ABR-213ENST00000571543 ARFGEF2Q9Y6D5 1785 aa27.32■■□□□ 1.96
ABR-213ENST00000571543 FAM177BA6PVY3 158 aa27.31■■□□□ 1.96
ABR-213ENST00000571543 HSPA6P17066 643 aa27.31■■□□□ 1.96
ABR-213ENST00000571543 CFAP44Q96MT7 982 aa27.31■■□□□ 1.96
ABR-213ENST00000571543 ZBTB3Q9H5J0 574 aa27.31■■□□□ 1.96
ABR-213ENST00000571543 PDZRN3Q9UPQ7 1066 aa27.31■■□□□ 1.96
ABR-213ENST00000571543 ANXA1P04083 346 aa27.3■■□□□ 1.96
ABR-213ENST00000571543 PROSER3Q2NL68 480 aa27.3■■□□□ 1.96
ABR-213ENST00000571543 TPTE2Q6XPS3 522 aa27.3■■□□□ 1.96
ABR-213ENST00000571543 LRP10Q7Z4F1 713 aa27.3■■□□□ 1.96
ABR-213ENST00000571543 NMRK2Q9NPI5 230 aa27.3■■□□□ 1.96
ABR-213ENST00000571543 FER1L6Q2WGJ9 1857 aa27.3■■□□□ 1.96
ABR-213ENST00000571543 RNF181Q9P0P0 153 aa27.29■■□□□ 1.96
ABR-213ENST00000571543 DICER1Q9UPY3 1922 aaKnown RBP27.29■■□□□ 1.96
ABR-213ENST00000571543 RASSF7Q02833 373 aa27.28■■□□□ 1.96
ABR-213ENST00000571543 MRS2Q9HD23 443 aa27.28■■□□□ 1.96
ABR-213ENST00000571543 NUP98P52948 1817 aa27.27■■□□□ 1.96
ABR-213ENST00000571543 MBIPQ9NS73 344 aa27.27■■□□□ 1.96
ABR-213ENST00000571543 ZNF853P0CG23 659 aa27.26■■□□□ 1.95
ABR-213ENST00000571543 SRGNP10124 158 aa27.25■■□□□ 1.95
ABR-213ENST00000571543 GPTP24298 496 aa27.25■■□□□ 1.95
ABR-213ENST00000571543 SLX4Q8IY92 1834 aa27.25■■□□□ 1.95
ABR-213ENST00000571543 GTF2E1P29083 439 aaPredicted RBP27.24■■□□□ 1.95
ABR-213ENST00000571543 CALD1Q05682 793 aaKnown RBP27.24■■□□□ 1.95
ABR-213ENST00000571543 GIGYF2Q6Y7W6 1299 aaKnown RBP27.24■■□□□ 1.95
ABR-213ENST00000571543 IFT57Q9NWB7 429 aa27.24■■□□□ 1.95
ABR-213ENST00000571543 STYK1Q6J9G0 422 aa27.23■■□□□ 1.95
ABR-213ENST00000571543 MASTLQ96GX5 879 aa27.23■■□□□ 1.95
ABR-213ENST00000571543 DDX21Q9NR30 783 aaKnown RBP eCLIP27.23■■□□□ 1.95
ABR-213ENST00000571543 ZNF219Q9P2Y4 722 aaPredicted RBP27.23■■□□□ 1.95
ABR-213ENST00000571543 WDR90Q96KV7 1748 aa27.23■■□□□ 1.95
ABR-213ENST00000571543 UBN2Q6ZU65 1347 aa27.22■■□□□ 1.95
ABR-213ENST00000571543 TOMM70O94826 608 aa27.22■■□□□ 1.95
ABR-213ENST00000571543 HOXB7P09629 217 aa27.22■■□□□ 1.95
ABR-213ENST00000571543 PRELPP51888 382 aa27.22■■□□□ 1.95
ABR-213ENST00000571543 GNAI1P63096 354 aa27.22■■□□□ 1.95
ABR-213ENST00000571543 AIMP1Q12904 312 aaKnown RBP27.22■■□□□ 1.95
ABR-213ENST00000571543 HDGFL1Q5TGJ6 251 aa27.22■■□□□ 1.95
ABR-213ENST00000571543 DUSP27Q5VZP5 1158 aa27.22■■□□□ 1.95
ABR-213ENST00000571543 COPS6Q7L5N1 327 aa27.22■■□□□ 1.95
ABR-213ENST00000571543 ZNF34Q8IZ26 560 aa27.22■■□□□ 1.95
ABR-213ENST00000571543 XAGE3Q8WTP9 111 aa27.22■■□□□ 1.95
ABR-213ENST00000571543 CNKSR1Q969H4 720 aa27.22■■□□□ 1.95
ABR-213ENST00000571543 KLRG2A4D1S0 409 aaPredicted RBP27.21■■□□□ 1.95
ABR-213ENST00000571543 C21orf2O43822 256 aa27.21■■□□□ 1.95
ABR-213ENST00000571543 NUTM1Q86Y26 1132 aa27.21■■□□□ 1.95
ABR-213ENST00000571543 NYXQ9GZU5 481 aa27.21■■□□□ 1.95
ABR-213ENST00000571543 CHPF2Q9P2E5 772 aa27.21■■□□□ 1.95
ABR-213ENST00000571543 SUSD4Q5VX71 490 aa27.2■■□□□ 1.94
ABR-213ENST00000571543 PRPF40BQ6NWY9 871 aaKnown RBP27.19■■□□□ 1.94
ABR-213ENST00000571543 KDM2BQ8NHM5 1336 aa27.18■■□□□ 1.94
ABR-213ENST00000571543 NFKBIEO00221 500 aa27.18■■□□□ 1.94
ABR-213ENST00000571543 NPR1P16066 1061 aa27.18■■□□□ 1.94
ABR-213ENST00000571543 ERFEQ4G0M1 354 aa27.18■■□□□ 1.94
ABR-213ENST00000571543 ABCC12Q96J65 1359 aa27.18■■□□□ 1.94
ABR-213ENST00000571543 ZC3H4Q9UPT8 1303 aaKnown RBP27.17■■□□□ 1.94
ABR-213ENST00000571543 LMNB1P20700 586 aa27.17■■□□□ 1.94
ABR-213ENST00000571543 ELL2O00472 640 aaPredicted RBP27.16■■□□□ 1.94
ABR-213ENST00000571543 DBF4Q9UBU7 674 aaPredicted RBP27.16■■□□□ 1.94
ABR-213ENST00000571543 IBTKQ9P2D0 1353 aaPredicted RBP27.15■■□□□ 1.94
ABR-213ENST00000571543 CCDC27Q2M243 656 aa27.15■■□□□ 1.94
ABR-213ENST00000571543 NTSR2O95665 410 aa27.14■■□□□ 1.94
ABR-213ENST00000571543 PARP10Q53GL7 1025 aa27.14■■□□□ 1.94
ABR-213ENST00000571543 PPP1R42Q7Z4L9 355 aa27.14■■□□□ 1.94
ABR-213ENST00000571543 WWC1Q8IX03 1113 aa27.14■■□□□ 1.94
ABR-213ENST00000571543 RBM46Q8TBY0 533 aaKnown RBP27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms