RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 NLRP8Q86W28 1048 aa8.6□□□□□ -1.03
KARSP3-201ENST00000571212 SFI1A8K8P3 1242 aa8.59□□□□□ -1.03
KARSP3-201ENST00000571212 KHNYNO15037 678 aaKnown RBP8.59□□□□□ -1.03
KARSP3-201ENST00000571212 CD33P20138 364 aa8.59□□□□□ -1.03
KARSP3-201ENST00000571212 SNRPNP63162 240 aaKnown RBP8.59□□□□□ -1.03
KARSP3-201ENST00000571212 BICDL1Q6ZP65 573 aa8.59□□□□□ -1.03
KARSP3-201ENST00000571212 ZDHHC3Q9NYG2 299 aa8.59□□□□□ -1.03
KARSP3-201ENST00000571212 ZNF232Q9UNY5 417 aa8.59□□□□□ -1.03
KARSP3-201ENST00000571212 MAPTP10636 758 aaKnown RBP8.59□□□□□ -1.03
KARSP3-201ENST00000571212 ATP1A2P50993 1020 aa8.59□□□□□ -1.03
KARSP3-201ENST00000571212 TNP2Q05952 138 aa8.59□□□□□ -1.03
KARSP3-201ENST00000571212 CYB5RLQ6IPT4 315 aa8.59□□□□□ -1.03
KARSP3-201ENST00000571212 TSEN2Q8NCE0 465 aaKnown RBP8.59□□□□□ -1.03
KARSP3-201ENST00000571212 TSPAN10Q9H1Z9 355 aaPredicted RBP8.59□□□□□ -1.03
KARSP3-201ENST00000571212 GGA1Q9UJY5 639 aa8.59□□□□□ -1.03
KARSP3-201ENST00000571212 AQRO60306 1485 aaKnown RBP eCLIP8.59□□□□□ -1.04
KARSP3-201ENST00000571212 DKK1O94907 266 aa8.58□□□□□ -1.04
KARSP3-201ENST00000571212 TEAD4Q15561 434 aa8.58□□□□□ -1.04
KARSP3-201ENST00000571212 EDARADDQ8WWZ3 215 aa8.58□□□□□ -1.04
KARSP3-201ENST00000571212 DNMT3AQ9Y6K1 912 aaPredicted RBP8.58□□□□□ -1.04
KARSP3-201ENST00000571212 POLA1P09884 1462 aaPredicted RBP8.57□□□□□ -1.04
KARSP3-201ENST00000571212 PALM3A6NDB9 673 aaPredicted RBP8.57□□□□□ -1.04
KARSP3-201ENST00000571212 LARGE2Q8N3Y3 721 aa8.57□□□□□ -1.04
KARSP3-201ENST00000571212 STRN4Q9NRL3 753 aa8.57□□□□□ -1.04
KARSP3-201ENST00000571212 MAFBQ9Y5Q3 323 aaPredicted RBP8.57□□□□□ -1.04
KARSP3-201ENST00000571212 GJA3Q9Y6H8 435 aa8.57□□□□□ -1.04
KARSP3-201ENST00000571212 KANK3Q6NY19 840 aa8.56□□□□□ -1.04
KARSP3-201ENST00000571212 LRRC69Q6ZNQ3 347 aa8.56□□□□□ -1.04
KARSP3-201ENST00000571212 BEND7Q8N7W2 519 aaPredicted RBP8.56□□□□□ -1.04
KARSP3-201ENST00000571212 C7orf43Q8WVR3 580 aa8.56□□□□□ -1.04
KARSP3-201ENST00000571212 CALR3Q96L12 384 aaKnown RBP8.56□□□□□ -1.04
KARSP3-201ENST00000571212 LRRC4BQ9NT99 713 aa8.56□□□□□ -1.04
KARSP3-201ENST00000571212 KLF15Q9UIH9 416 aa8.56□□□□□ -1.04
KARSP3-201ENST00000571212 GDF2Q9UK05 429 aaPredicted RBP8.56□□□□□ -1.04
KARSP3-201ENST00000571212 ARAP1Q96P48 1450 aa8.56□□□□□ -1.04
KARSP3-201ENST00000571212 SERTM1A2A2V5 107 aa8.55□□□□□ -1.04
KARSP3-201ENST00000571212 A6NJR5 290 aa8.55□□□□□ -1.04
KARSP3-201ENST00000571212 NEURL1BA8MQ27 555 aa8.55□□□□□ -1.04
KARSP3-201ENST00000571212 EML1O00423 815 aa8.55□□□□□ -1.04
KARSP3-201ENST00000571212 LGR5O75473 907 aa8.55□□□□□ -1.04
KARSP3-201ENST00000571212 RASA1P20936 1047 aa8.55□□□□□ -1.04
KARSP3-201ENST00000571212 GOLGA6L1Q8N7Z2 621 aa8.55□□□□□ -1.04
KARSP3-201ENST00000571212 RRAGCQ9HB90 399 aa8.55□□□□□ -1.04
KARSP3-201ENST00000571212 HCN4Q9Y3Q4 1203 aa8.55□□□□□ -1.04
KARSP3-201ENST00000571212 GRIN2CQ14957 1233 aa8.54□□□□□ -1.04
KARSP3-201ENST00000571212 PODNQ7Z5L7 613 aa8.54□□□□□ -1.04
KARSP3-201ENST00000571212 SIX5Q8N196 739 aa8.54□□□□□ -1.04
KARSP3-201ENST00000571212 PPP1R12CQ9BZL4 782 aa8.54□□□□□ -1.04
KARSP3-201ENST00000571212 WDR97A6NE52 1622 aa8.54□□□□□ -1.04
KARSP3-201ENST00000571212 GAS2L2Q8NHY3 880 aa8.54□□□□□ -1.04
KARSP3-201ENST00000571212 PHF20L1A8MW92 1017 aa8.53□□□□□ -1.04
KARSP3-201ENST00000571212 SOGA1O94964 1423 aa8.53□□□□□ -1.04
KARSP3-201ENST00000571212 HOXB4P17483 251 aaPredicted RBP8.53□□□□□ -1.04
KARSP3-201ENST00000571212 CRTC2Q53ET0 693 aaPredicted RBP8.53□□□□□ -1.04
KARSP3-201ENST00000571212 GPAT2Q6NUI2 795 aa8.53□□□□□ -1.04
KARSP3-201ENST00000571212 SLCO4C1Q6ZQN7 724 aa8.53□□□□□ -1.04
KARSP3-201ENST00000571212 RAD54L2Q9Y4B4 1467 aa8.53□□□□□ -1.04
KARSP3-201ENST00000571212 C21orf2O43822 256 aa8.52□□□□□ -1.05
KARSP3-201ENST00000571212 FAM157BP0CG42 384 aa8.52□□□□□ -1.05
KARSP3-201ENST00000571212 ARAFP10398 606 aa8.52□□□□□ -1.05
KARSP3-201ENST00000571212 AMPD1P23109 780 aa8.52□□□□□ -1.05
KARSP3-201ENST00000571212 PCBP4P57723 403 aaKnown RBP8.52□□□□□ -1.05
KARSP3-201ENST00000571212 DCAF5Q96JK2 942 aa8.52□□□□□ -1.05
KARSP3-201ENST00000571212 ZNF777Q9ULD5 760 aaPredicted RBP8.52□□□□□ -1.05
KARSP3-201ENST00000571212 TDRD9Q8NDG6 1382 aaKnown RBP8.51□□□□□ -1.05
KARSP3-201ENST00000571212 M0R2N6 131 aa8.51□□□□□ -1.05
KARSP3-201ENST00000571212 EFSO43281 561 aa8.51□□□□□ -1.05
KARSP3-201ENST00000571212 EPXP11678 715 aa8.51□□□□□ -1.05
KARSP3-201ENST00000571212 LMOD1P29536 600 aaPredicted RBP8.51□□□□□ -1.05
KARSP3-201ENST00000571212 PSMA6P60900 246 aaKnown RBP8.51□□□□□ -1.05
KARSP3-201ENST00000571212 KANK4Q5T7N3 995 aaPredicted RBP8.51□□□□□ -1.05
KARSP3-201ENST00000571212 SAMD5Q5TGI4 173 aa8.51□□□□□ -1.05
KARSP3-201ENST00000571212 RHPN1Q8TCX5 695 aa8.51□□□□□ -1.05
KARSP3-201ENST00000571212 HSH2DQ96JZ2 352 aa8.51□□□□□ -1.05
KARSP3-201ENST00000571212 BTBD6Q96KE9 485 aa8.51□□□□□ -1.05
KARSP3-201ENST00000571212 MARK1Q9P0L2 795 aa8.51□□□□□ -1.05
KARSP3-201ENST00000571212 RBM19Q9Y4C8 960 aaKnown RBP8.51□□□□□ -1.05
KARSP3-201ENST00000571212 CLASP1Q7Z460 1538 aa8.51□□□□□ -1.05
KARSP3-201ENST00000571212 PPP1R12BO60237 982 aaPredicted RBP8.5□□□□□ -1.05
KARSP3-201ENST00000571212 FAM182BQ5T319 152 aa8.5□□□□□ -1.05
KARSP3-201ENST00000571212 FCHSD1Q86WN1 690 aa8.5□□□□□ -1.05
KARSP3-201ENST00000571212 PHACTR1Q9C0D0 580 aa8.5□□□□□ -1.05
KARSP3-201ENST00000571212 NEUROD4Q9HD90 331 aa8.5□□□□□ -1.05
KARSP3-201ENST00000571212 SNAPC4Q5SXM2 1469 aa8.5□□□□□ -1.05
KARSP3-201ENST00000571212 FGD5Q6ZNL6 1462 aa8.5□□□□□ -1.05
KARSP3-201ENST00000571212 ATAD2Q6PL18 1390 aa8.5□□□□□ -1.05
KARSP3-201ENST00000571212 ITGB2P05107 769 aa8.49□□□□□ -1.05
KARSP3-201ENST00000571212 SFSWAPQ12872 951 aaKnown RBP8.49□□□□□ -1.05
KARSP3-201ENST00000571212 ZNF280CQ8ND82 737 aa8.49□□□□□ -1.05
KARSP3-201ENST00000571212 CHMP7Q8WUX9 453 aaPredicted RBP8.49□□□□□ -1.05
KARSP3-201ENST00000571212 SCG3Q8WXD2 468 aaKnown RBP8.49□□□□□ -1.05
KARSP3-201ENST00000571212 SYNJ1O43426 1573 aa8.49□□□□□ -1.05
KARSP3-201ENST00000571212 MAGI1Q96QZ7 1491 aaPredicted RBP8.49□□□□□ -1.05
KARSP3-201ENST00000571212 SEC13P55735 322 aa8.49□□□□□ -1.05
KARSP3-201ENST00000571212 DPYDQ12882 1025 aa8.49□□□□□ -1.05
KARSP3-201ENST00000571212 PTK7Q13308 1070 aa8.49□□□□□ -1.05
KARSP3-201ENST00000571212 LARP1Q6PKG0 1096 aaKnown RBP8.49□□□□□ -1.05
KARSP3-201ENST00000571212 LINC00114Q6XXX2 140 aa8.49□□□□□ -1.05
KARSP3-201ENST00000571212 HINFPQ9BQA5 517 aa8.49□□□□□ -1.05
KARSP3-201ENST00000571212 SUV39H2Q9H5I1 410 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms