RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-204ENST00000570749 EIF4A1P60842 406 aaKnown RBP12.74□□□□□ -0.37
TRIM25-204ENST00000570749 WDR43Q15061 677 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRIM25-204ENST00000570749 C9orf131Q5VYM1 1079 aa12.74□□□□□ -0.37
TRIM25-204ENST00000570749 CNKSR1Q969H4 720 aa12.74□□□□□ -0.37
TRIM25-204ENST00000570749 IBTKQ9P2D0 1353 aaPredicted RBP12.73□□□□□ -0.37
TRIM25-204ENST00000570749 LMNB1P20700 586 aa12.73□□□□□ -0.37
TRIM25-204ENST00000570749 RIPK4P57078 832 aa12.73□□□□□ -0.37
TRIM25-204ENST00000570749 STYK1Q6J9G0 422 aa12.73□□□□□ -0.37
TRIM25-204ENST00000570749 TPTE2Q6XPS3 522 aa12.73□□□□□ -0.37
TRIM25-204ENST00000570749 NBPF5PQ86XG9 351 aaPredicted RBP12.73□□□□□ -0.37
TRIM25-204ENST00000570749 ZNF526Q8TF50 670 aaPredicted RBP12.73□□□□□ -0.37
TRIM25-204ENST00000570749 NYXQ9GZU5 481 aa12.73□□□□□ -0.37
TRIM25-204ENST00000570749 RNF181Q9P0P0 153 aa12.73□□□□□ -0.37
TRIM25-204ENST00000570749 RIC1Q4ADV7 1423 aa12.72□□□□□ -0.37
TRIM25-204ENST00000570749 LTBP3Q9NS15 1303 aa12.72□□□□□ -0.37
TRIM25-204ENST00000570749 PRAMEF22A3QJZ6 481 aa12.72□□□□□ -0.37
TRIM25-204ENST00000570749 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
TRIM25-204ENST00000570749 KIF3CO14782 793 aa12.72□□□□□ -0.37
TRIM25-204ENST00000570749 TOMM70O94826 608 aa12.72□□□□□ -0.37
TRIM25-204ENST00000570749 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
TRIM25-204ENST00000570749 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
TRIM25-204ENST00000570749 KIF6Q6ZMV9 814 aa12.72□□□□□ -0.37
TRIM25-204ENST00000570749 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
TRIM25-204ENST00000570749 MASTLQ96GX5 879 aa12.72□□□□□ -0.37
TRIM25-204ENST00000570749 TSPYL4Q9UJ04 414 aa12.72□□□□□ -0.37
TRIM25-204ENST00000570749 RUNDC1Q96C34 613 aa12.71□□□□□ -0.37
TRIM25-204ENST00000570749 NIP7Q9Y221 180 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRIM25-204ENST00000570749 ANKRD36CQ5JPF3 1778 aa12.71□□□□□ -0.38
TRIM25-204ENST00000570749 MAP3K15Q6ZN16 1313 aa12.7□□□□□ -0.38
TRIM25-204ENST00000570749 KLRG2A4D1S0 409 aaPredicted RBP12.7□□□□□ -0.38
TRIM25-204ENST00000570749 SRGNP10124 158 aa12.7□□□□□ -0.38
TRIM25-204ENST00000570749 HSPA6P17066 643 aa12.7□□□□□ -0.38
TRIM25-204ENST00000570749 C16orf71Q8IYS4 520 aaPredicted RBP12.7□□□□□ -0.38
TRIM25-204ENST00000570749 ZNF622Q969S3 477 aaKnown RBP eCLIP12.7□□□□□ -0.385e-11■□□□□ 8.8
TRIM25-204ENST00000570749 PRKRIP1Q9H875 184 aaPredicted RBP12.7□□□□□ -0.38
TRIM25-204ENST00000570749 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
TRIM25-204ENST00000570749 NPR1P16066 1061 aa12.69□□□□□ -0.38
TRIM25-204ENST00000570749 RBM46Q8TBY0 533 aaKnown RBP12.69□□□□□ -0.38
TRIM25-204ENST00000570749 MIS18AQ9NYP9 233 aa12.69□□□□□ -0.38
TRIM25-204ENST00000570749 RNF123Q5XPI4 1314 aa12.68□□□□□ -0.38
TRIM25-204ENST00000570749 HOXB7P09629 217 aa12.68□□□□□ -0.38
TRIM25-204ENST00000570749 GTF2E1P29083 439 aaPredicted RBP12.68□□□□□ -0.38
TRIM25-204ENST00000570749 ALDH1B1P30837 517 aa12.68□□□□□ -0.38
TRIM25-204ENST00000570749 PIP4K2AP48426 406 aaPredicted RBP12.68□□□□□ -0.38
TRIM25-204ENST00000570749 CALD1Q05682 793 aaKnown RBP12.68□□□□□ -0.38
TRIM25-204ENST00000570749 FSTL1Q12841 308 aa12.67□□□□□ -0.38
TRIM25-204ENST00000570749 GRIPAP1Q4V328 841 aa12.67□□□□□ -0.38
TRIM25-204ENST00000570749 PARP10Q53GL7 1025 aa12.67□□□□□ -0.38
TRIM25-204ENST00000570749 PRPF40BQ6NWY9 871 aaKnown RBP12.67□□□□□ -0.38
TRIM25-204ENST00000570749 THUMPD2Q9BTF0 503 aaKnown RBP12.67□□□□□ -0.38
TRIM25-204ENST00000570749 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
TRIM25-204ENST00000570749 TAOK3Q9H2K8 898 aa12.67□□□□□ -0.38
TRIM25-204ENST00000570749 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
TRIM25-204ENST00000570749 WDR90Q96KV7 1748 aa12.67□□□□□ -0.38
TRIM25-204ENST00000570749 GLTPD2A6NH11 291 aa12.66□□□□□ -0.38
TRIM25-204ENST00000570749 NFKBIEO00221 500 aa12.66□□□□□ -0.38
TRIM25-204ENST00000570749 APLP1P51693 650 aa12.66□□□□□ -0.38
TRIM25-204ENST00000570749 RASSF7Q02833 373 aa12.66□□□□□ -0.38
TRIM25-204ENST00000570749 CCDC93Q567U6 631 aa12.66□□□□□ -0.38
TRIM25-204ENST00000570749 HSP90AB3PQ58FF7 597 aa12.66□□□□□ -0.38
TRIM25-204ENST00000570749 DPY19L2Q6NUT2 758 aa12.66□□□□□ -0.38
TRIM25-204ENST00000570749 GIGYF2Q6Y7W6 1299 aaKnown RBP12.66□□□□□ -0.38
TRIM25-204ENST00000570749 PPP1R42Q7Z4L9 355 aa12.66□□□□□ -0.38
TRIM25-204ENST00000570749 CHL1O00533 1208 aa12.65□□□□□ -0.38
TRIM25-204ENST00000570749 C21orf2O43822 256 aa12.65□□□□□ -0.38
TRIM25-204ENST00000570749 MYL6BP14649 208 aa12.65□□□□□ -0.38
TRIM25-204ENST00000570749 HLFQ16534 295 aa12.65□□□□□ -0.38
TRIM25-204ENST00000570749 CC2D2BQ6DHV5 1058 aa12.65□□□□□ -0.38
TRIM25-204ENST00000570749 RTKN2Q8IZC4 609 aa12.65□□□□□ -0.38
TRIM25-204ENST00000570749 NMRK2Q9NPI5 230 aa12.65□□□□□ -0.38
TRIM25-204ENST00000570749 VEGFAP15692 232 aaPredicted RBP12.64□□□□□ -0.39
TRIM25-204ENST00000570749 CRY2Q49AN0 593 aa12.64□□□□□ -0.39
TRIM25-204ENST00000570749 CFAP44Q96MT7 982 aa12.64□□□□□ -0.39
TRIM25-204ENST00000570749 ADAMTS8Q9UP79 889 aa12.64□□□□□ -0.39
TRIM25-204ENST00000570749 SCN4AP35499 1836 aa12.64□□□□□ -0.39
TRIM25-204ENST00000570749 ERFEQ4G0M1 354 aa12.63□□□□□ -0.39
TRIM25-204ENST00000570749 TTLL7Q6ZT98 887 aa12.63□□□□□ -0.39
TRIM25-204ENST00000570749 CCDC146Q8IYE0 955 aa12.63□□□□□ -0.39
TRIM25-204ENST00000570749 ZNF34Q8IZ26 560 aa12.63□□□□□ -0.39
TRIM25-204ENST00000570749 NGEFQ8N5V2 710 aa12.63□□□□□ -0.39
TRIM25-204ENST00000570749 DDX21Q9NR30 783 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIM25-204ENST00000570749 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
TRIM25-204ENST00000570749 EIF2S2P20042 333 aaKnown RBP12.62□□□□□ -0.39
TRIM25-204ENST00000570749 HOXA10P31260 410 aaPredicted RBP12.62□□□□□ -0.39
TRIM25-204ENST00000570749 FKBP4Q02790 459 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRIM25-204ENST00000570749 NEUROD2Q15784 382 aa12.62□□□□□ -0.39
TRIM25-204ENST00000570749 LRP10Q7Z4F1 713 aa12.62□□□□□ -0.39
TRIM25-204ENST00000570749 CCDC24Q8N4L8 307 aa12.62□□□□□ -0.39
TRIM25-204ENST00000570749 SMC1BQ8NDV3 1235 aa12.62□□□□□ -0.39
TRIM25-204ENST00000570749 C7orf43Q8WVR3 580 aa12.62□□□□□ -0.39
TRIM25-204ENST00000570749 RPGRQ92834 1020 aaKnown RBP12.62□□□□□ -0.39
TRIM25-204ENST00000570749 ZBTB3Q9H5J0 574 aa12.62□□□□□ -0.39
TRIM25-204ENST00000570749 PDIA6Q15084 440 aa12.61□□□□□ -0.39
TRIM25-204ENST00000570749 TMX4Q9H1E5 349 aaPredicted RBP12.61□□□□□ -0.39
TRIM25-204ENST00000570749 RRAGCQ9HB90 399 aa12.61□□□□□ -0.39
TRIM25-204ENST00000570749 DBF4Q9UBU7 674 aaPredicted RBP12.61□□□□□ -0.39
TRIM25-204ENST00000570749 UBN2Q6ZU65 1347 aa12.61□□□□□ -0.39
TRIM25-204ENST00000570749 ABCC12Q96J65 1359 aa12.6□□□□□ -0.39
TRIM25-204ENST00000570749 IQCA1LA6NCM1 817 aa12.6□□□□□ -0.39
TRIM25-204ENST00000570749 FAM177BA6PVY3 158 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms