RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 PRPF40AO75400 957 aaKnown RBP4.61□□□□□ -1.67
CNOT1-221ENST00000569924 IGFBP4P22692 258 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 MMP16P51512 607 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 PLCB3Q01970 1234 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 DSC3Q14574 896 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 GGT6Q6P531 493 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 POTEEQ6S8J3 1075 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 SH3RF1Q7Z6J0 888 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 FAM160A2Q8N612 972 aaPredicted RBP4.61□□□□□ -1.67
CNOT1-221ENST00000569924 PURBQ96QR8 312 aaKnown RBP4.61□□□□□ -1.67
CNOT1-221ENST00000569924 CHMP4AQ9BY43 222 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 TGIF2Q9GZN2 237 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 METTL5Q9NRN9 209 aaKnown RBP4.61□□□□□ -1.67
CNOT1-221ENST00000569924 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.61□□□□□ -1.67
CNOT1-221ENST00000569924 PARP2Q9UGN5 583 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 BRPF3Q9ULD4 1205 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 CEP162Q5TB80 1403 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 EHBP1L1Q8N3D4 1523 aa4.61□□□□□ -1.67
CNOT1-221ENST00000569924 LDHBP07195 334 aaKnown RBP4.6□□□□□ -1.67
CNOT1-221ENST00000569924 DAB2P98082 770 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 TMC4Q7Z404 712 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 RNF34Q969K3 372 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 DMRTB1Q96MA1 342 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 TINF2Q9BSI4 451 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 HIRIP3Q9BW71 556 aaPredicted RBP4.6□□□□□ -1.67
CNOT1-221ENST00000569924 CARD14Q9BXL6 1004 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 MRS2Q9HD23 443 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 NLRP2Q9NX02 1062 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 PRKAG2Q9UGJ0 569 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 PCDHB3Q9Y5E6 796 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 PCDHB11Q9Y5F2 797 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 ZNF644Q9H582 1327 aaPredicted RBP4.6□□□□□ -1.67
CNOT1-221ENST00000569924 TNRQ92752 1358 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 PZPP20742 1482 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 CPS1P31327 1500 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 KDM5DQ9BY66 1539 aa4.6□□□□□ -1.67
CNOT1-221ENST00000569924 POLR1AO95602 1720 aaPredicted RBP4.6□□□□□ -1.67
CNOT1-221ENST00000569924 MAGEB6P1A0A0J9YX57 407 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 ESPNB1AK53 854 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 SORBS3O60504 671 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 ATP2B1P20020 1258 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 MPSTP25325 297 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 PBX2P40425 430 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 MAPK8P45983 427 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 APLP1P51693 650 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 PPP4CP60510 307 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 FANCCQ00597 558 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 NBPF20Q3BBV1 942 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 ERFEQ4G0M1 354 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 CCDC141Q6ZP82 1450 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 SEPT12Q8IYM1 358 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.59□□□□□ -1.67
CNOT1-221ENST00000569924 TMC1Q8TDI8 760 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 ARMC5Q96C12 935 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 NEURL4Q96JN8 1562 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 FAM161BQ96MY7 647 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 DNAJC2Q99543 621 aaKnown RBP4.59□□□□□ -1.67
CNOT1-221ENST00000569924 DUSP9Q99956 384 aaKnown RBP4.59□□□□□ -1.67
CNOT1-221ENST00000569924 NLRP1Q9C000 1473 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 LNPKQ9C0E8 428 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 UNC93B1Q9H1C4 597 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 SHANK2Q9UPX8 1470 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 AXIN2Q9Y2T1 843 aa4.59□□□□□ -1.67
CNOT1-221ENST00000569924 DEPDC5O75140 1603 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 ARHGEF5Q12774 1597 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 MED14O60244 1454 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 CAMSAP2Q08AD1 1489 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 MIA2Q96PC5 1412 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 WASHC2CQ9Y4E1 1318 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 KIF3BO15066 747 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 TOM1O60784 492 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 EHHADHQ08426 723 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 GNL2Q13823 731 aaKnown RBP4.58□□□□□ -1.68
CNOT1-221ENST00000569924 PTCRAQ6ISU1 281 aaPredicted RBP4.58□□□□□ -1.68
CNOT1-221ENST00000569924 ALKBH2Q6NS38 261 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 MAMSTRQ6ZN01 415 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 BPHLQ86WA6 291 aaPredicted RBP4.58□□□□□ -1.68
CNOT1-221ENST00000569924 ANKLE2Q86XL3 938 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 THEMISQ8N1K5 641 aaPredicted RBP4.58□□□□□ -1.68
CNOT1-221ENST00000569924 MRPL50Q8N5N7 158 aaKnown RBP4.58□□□□□ -1.68
CNOT1-221ENST00000569924 GAS2L2Q8NHY3 880 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 GMLQ99445 158 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 SPSB2Q99619 263 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 PRKD2Q9BZL6 878 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 CCSER2Q9H7U1 834 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 CAPN10Q9HC96 672 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 SCUBE2Q9NQ36 999 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.58□□□□□ -1.68
CNOT1-221ENST00000569924 ZNF358Q9NW07 568 aa4.58□□□□□ -1.68
CNOT1-221ENST00000569924 VWDEQ8N2E2 1590 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 NCOA2Q15596 1464 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 NPHP4O75161 1426 aaPredicted RBP4.57□□□□□ -1.68
CNOT1-221ENST00000569924 ATAD2Q6PL18 1390 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 TLDC2A0PJX2 215 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 TK2O00142 265 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 MYCP01106 439 aaPredicted RBP4.57□□□□□ -1.68
CNOT1-221ENST00000569924 IGHA2P01877 340 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 HSPA1LP34931 641 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 GTF2F1P35269 517 aaKnown RBP eCLIP4.57□□□□□ -1.68
CNOT1-221ENST00000569924 ZNF76P36508 570 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms