RNA–Protein interactions for RNA: ENST00000569898.5

NUBP2-216, Transcript of nucleotide binding protein 2, humanhuman

TSL 3

Gene NUBP2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP2-216ENST00000569898 PRAMEF22A3QJZ6 481 aa23.24■■□□□ 1.31
NUBP2-216ENST00000569898 SRGNP10124 158 aa23.24■■□□□ 1.31
NUBP2-216ENST00000569898 STYK1Q6J9G0 422 aa23.24■■□□□ 1.31
NUBP2-216ENST00000569898 DPY19L2Q6NUT2 758 aa23.24■■□□□ 1.31
NUBP2-216ENST00000569898 PRPF40BQ6NWY9 871 aaKnown RBP23.24■■□□□ 1.31
NUBP2-216ENST00000569898 USP16Q9Y5T5 823 aa23.24■■□□□ 1.31
NUBP2-216ENST00000569898 ST5P78524 1137 aa23.23■■□□□ 1.31
NUBP2-216ENST00000569898 CNKSR1Q969H4 720 aa23.23■■□□□ 1.31
NUBP2-216ENST00000569898 HSPA1AP0DMV8 641 aaKnown RBP23.22■■□□□ 1.31
NUBP2-216ENST00000569898 HSPA1BP0DMV9 641 aaKnown RBP23.22■■□□□ 1.31
NUBP2-216ENST00000569898 LAMB4A4D0S4 1761 aa23.22■■□□□ 1.31
NUBP2-216ENST00000569898 POTEIP0CG38 1075 aa23.21■■□□□ 1.31
NUBP2-216ENST00000569898 POTEJP0CG39 1038 aa23.21■■□□□ 1.31
NUBP2-216ENST00000569898 NPM2Q86SE8 214 aaKnown RBP23.21■■□□□ 1.31
NUBP2-216ENST00000569898 MASTLQ96GX5 879 aa23.21■■□□□ 1.31
NUBP2-216ENST00000569898 NPHP1O15259 732 aa23.2■■□□□ 1.3
NUBP2-216ENST00000569898 SCN4AP35499 1836 aa23.19■■□□□ 1.3
NUBP2-216ENST00000569898 DDNO94850 711 aaPredicted RBP23.19■■□□□ 1.3
NUBP2-216ENST00000569898 SOGA3Q5TF21 947 aa23.18■■□□□ 1.3
NUBP2-216ENST00000569898 CLEC4GQ6UXB4 293 aa23.18■■□□□ 1.3
NUBP2-216ENST00000569898 MCM10Q7L590 875 aa23.18■■□□□ 1.3
NUBP2-216ENST00000569898 TNS4Q8IZW8 715 aa23.18■■□□□ 1.3
NUBP2-216ENST00000569898 C7orf43Q8WVR3 580 aa23.18■■□□□ 1.3
NUBP2-216ENST00000569898 CHADLQ6NUI6 762 aa23.17■■□□□ 1.3
NUBP2-216ENST00000569898 NBPF5PQ86XG9 351 aaPredicted RBP23.17■■□□□ 1.3
NUBP2-216ENST00000569898 CFAP53Q96M91 514 aa23.17■■□□□ 1.3
NUBP2-216ENST00000569898 NBPF26B4DH59 902 aa23.16■■□□□ 1.3
NUBP2-216ENST00000569898 SNRPA1P09661 255 aaKnown RBP23.16■■□□□ 1.3
NUBP2-216ENST00000569898 NBPF10Q6P3W6 841 aaKnown RBP23.16■■□□□ 1.3
NUBP2-216ENST00000569898 NBPF15Q8N660 670 aa23.16■■□□□ 1.3
NUBP2-216ENST00000569898 CAPN15O75808 1086 aa23.15■■□□□ 1.3
NUBP2-216ENST00000569898 ZNF652Q9Y2D9 606 aa23.15■■□□□ 1.3
NUBP2-216ENST00000569898 KDM3BQ7LBC6 1761 aa23.14■■□□□ 1.3
NUBP2-216ENST00000569898 ADAMTSL1Q8N6G6 1762 aa23.14■■□□□ 1.3
NUBP2-216ENST00000569898 DLG5Q8TDM6 1919 aa23.14■■□□□ 1.3
NUBP2-216ENST00000569898 KLRG2A4D1S0 409 aaPredicted RBP23.14■■□□□ 1.29
NUBP2-216ENST00000569898 DCTN1Q14203 1278 aa23.14■■□□□ 1.29
NUBP2-216ENST00000569898 CCDC93Q567U6 631 aa23.14■■□□□ 1.29
NUBP2-216ENST00000569898 CREBZFQ9NS37 354 aa23.14■■□□□ 1.29
NUBP2-216ENST00000569898 U2AF1L5P0DN76 240 aaPredicted RBP23.13■■□□□ 1.29
NUBP2-216ENST00000569898 NPR1P16066 1061 aa23.13■■□□□ 1.29
NUBP2-216ENST00000569898 U2AF1Q01081 240 aaKnown RBP eCLIP23.13■■□□□ 1.29
NUBP2-216ENST00000569898 RTF1Q92541 710 aaKnown RBP23.13■■□□□ 1.29
NUBP2-216ENST00000569898 L3MBTL3Q96JM7 780 aaPredicted RBP23.13■■□□□ 1.29
NUBP2-216ENST00000569898 ZNF541Q9H0D2 1346 aa23.12■■□□□ 1.29
NUBP2-216ENST00000569898 RGL2O15211 777 aa23.12■■□□□ 1.29
NUBP2-216ENST00000569898 PPP2R1AP30153 589 aa23.12■■□□□ 1.29
NUBP2-216ENST00000569898 OLFM4Q6UX06 510 aa23.12■■□□□ 1.29
NUBP2-216ENST00000569898 MKRN1Q9UHC7 482 aaKnown RBP23.12■■□□□ 1.29
NUBP2-216ENST00000569898 NIP7Q9Y221 180 aaKnown RBP eCLIP23.12■■□□□ 1.29
NUBP2-216ENST00000569898 NUDCQ9Y266 331 aa23.12■■□□□ 1.29
NUBP2-216ENST00000569898 PASKQ96RG2 1323 aa23.11■■□□□ 1.29
NUBP2-216ENST00000569898 SNED1Q8TER0 1413 aa23.11■■□□□ 1.29
NUBP2-216ENST00000569898 FKBP4Q02790 459 aaKnown RBP eCLIP23.11■■□□□ 1.29
NUBP2-216ENST00000569898 NUP98P52948 1817 aa23.1■■□□□ 1.29
NUBP2-216ENST00000569898 IQCA1LA6NCM1 817 aa23.1■■□□□ 1.29
NUBP2-216ENST00000569898 TAF1DQ9H5J8 278 aaPredicted RBP23.1■■□□□ 1.29
NUBP2-216ENST00000569898 ZNF277Q9NRM2 450 aaPredicted RBP23.1■■□□□ 1.29
NUBP2-216ENST00000569898 HLFQ16534 295 aa23.09■■□□□ 1.29
NUBP2-216ENST00000569898 LDHDQ86WU2 507 aa23.09■■□□□ 1.29
NUBP2-216ENST00000569898 CNTNAP1P78357 1384 aa23.09■■□□□ 1.29
NUBP2-216ENST00000569898 ABCC12Q96J65 1359 aa23.09■■□□□ 1.29
NUBP2-216ENST00000569898 FAM177BA6PVY3 158 aa23.08■■□□□ 1.29
NUBP2-216ENST00000569898 TPTE2Q6XPS3 522 aa23.08■■□□□ 1.29
NUBP2-216ENST00000569898 HTATSF1O43719 755 aaKnown RBP23.07■■□□□ 1.28
NUBP2-216ENST00000569898 COL4A5P29400 1685 aa23.06■■□□□ 1.28
NUBP2-216ENST00000569898 TAF7Q15545 349 aaPredicted RBP23.05■■□□□ 1.28
NUBP2-216ENST00000569898 MIS18AQ9NYP9 233 aa23.05■■□□□ 1.28
NUBP2-216ENST00000569898 LTBP1Q14766 1721 aa23.03■■□□□ 1.28
NUBP2-216ENST00000569898 ITGBL1O95965 494 aaPredicted RBP23.03■■□□□ 1.28
NUBP2-216ENST00000569898 IARSP41252 1262 aaKnown RBP23.03■■□□□ 1.28
NUBP2-216ENST00000569898 RTKN2Q8IZC4 609 aa23.03■■□□□ 1.28
NUBP2-216ENST00000569898 HACL1Q9UJ83 578 aa23.03■■□□□ 1.28
NUBP2-216ENST00000569898 RNF123Q5XPI4 1314 aa23.03■■□□□ 1.28
NUBP2-216ENST00000569898 RIC1Q4ADV7 1423 aa23.02■■□□□ 1.28
NUBP2-216ENST00000569898 FZD9O00144 591 aa23.02■■□□□ 1.28
NUBP2-216ENST00000569898 CRY2Q49AN0 593 aa23.02■■□□□ 1.28
NUBP2-216ENST00000569898 EAPPQ56P03 285 aaPredicted RBP23.02■■□□□ 1.28
NUBP2-216ENST00000569898 FOXN1O15353 648 aa23.01■■□□□ 1.27
NUBP2-216ENST00000569898 ALDH1B1P30837 517 aa23.01■■□□□ 1.27
NUBP2-216ENST00000569898 NUTM1Q86Y26 1132 aa23.01■■□□□ 1.27
NUBP2-216ENST00000569898 SYNE4Q8N205 404 aa23.01■■□□□ 1.27
NUBP2-216ENST00000569898 EPHX2P34913 555 aa23■■□□□ 1.27
NUBP2-216ENST00000569898 MAP3K15Q6ZN16 1313 aa23■■□□□ 1.27
NUBP2-216ENST00000569898 IBTKQ9P2D0 1353 aaPredicted RBP23■■□□□ 1.27
NUBP2-216ENST00000569898 TMEM88BA6NKF7 163 aa22.99■■□□□ 1.27
NUBP2-216ENST00000569898 SLC51AQ86UW1 340 aa22.99■■□□□ 1.27
NUBP2-216ENST00000569898 NGEFQ8N5V2 710 aa22.99■■□□□ 1.27
NUBP2-216ENST00000569898 PSMD1Q99460 953 aa22.99■■□□□ 1.27
NUBP2-216ENST00000569898 UBN2Q6ZU65 1347 aa22.99■■□□□ 1.27
NUBP2-216ENST00000569898 ERVV-1B6SEH8 477 aa22.98■■□□□ 1.27
NUBP2-216ENST00000569898 GTF2E1P29083 439 aaPredicted RBP22.98■■□□□ 1.27
NUBP2-216ENST00000569898 VEGFBP49765 207 aa22.98■■□□□ 1.27
NUBP2-216ENST00000569898 TTLL7Q6ZT98 887 aa22.98■■□□□ 1.27
NUBP2-216ENST00000569898 NYXQ9GZU5 481 aa22.98■■□□□ 1.27
NUBP2-216ENST00000569898 EIF4A1P60842 406 aaKnown RBP22.97■■□□□ 1.27
NUBP2-216ENST00000569898 GPC2Q8N158 579 aa22.97■■□□□ 1.27
NUBP2-216ENST00000569898 PNISRQ8TF01 805 aaKnown RBP22.96■■□□□ 1.27
NUBP2-216ENST00000569898 PLEKHF1Q96S99 279 aa22.96■■□□□ 1.27
NUBP2-216ENST00000569898 CLEC11AQ9Y240 323 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms