RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 RNF223E7ERA6 249 aa6.6□□□□□ -1.35
CNOT1-219ENST00000569882 PPEF1O14829 653 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-219ENST00000569882 PPM1GO15355 546 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-219ENST00000569882 BAG6P46379 1132 aa6.6□□□□□ -1.35
CNOT1-219ENST00000569882 CCDC125Q86Z20 511 aa6.6□□□□□ -1.35
CNOT1-219ENST00000569882 SCUBE3Q8IX30 993 aa6.6□□□□□ -1.35
CNOT1-219ENST00000569882 GGNBP2Q9H3C7 697 aa6.6□□□□□ -1.35
CNOT1-219ENST00000569882 THRAP3Q9Y2W1 955 aaKnown RBP6.6□□□□□ -1.35
CNOT1-219ENST00000569882 COL5A2P05997 1499 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-219ENST00000569882 NSD3Q9BZ95 1437 aa6.59□□□□□ -1.35
CNOT1-219ENST00000569882 CAMTA1Q9Y6Y1 1673 aa6.59□□□□□ -1.35
CNOT1-219ENST00000569882 WDR17Q8IZU2 1322 aa6.59□□□□□ -1.35
CNOT1-219ENST00000569882 TULP1O00294 542 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-219ENST00000569882 IRF6O14896 467 aa6.59□□□□□ -1.35
CNOT1-219ENST00000569882 S1PR4O95977 384 aa6.59□□□□□ -1.35
CNOT1-219ENST00000569882 FUT2Q10981 343 aa6.59□□□□□ -1.35
CNOT1-219ENST00000569882 MAP2K5Q13163 448 aa6.59□□□□□ -1.35
CNOT1-219ENST00000569882 DDB1Q16531 1140 aa6.59□□□□□ -1.35
CNOT1-219ENST00000569882 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.59□□□□□ -1.35
CNOT1-219ENST00000569882 ARHGEF25Q86VW2 580 aa6.59□□□□□ -1.35
CNOT1-219ENST00000569882 EMID1Q96A84 441 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-219ENST00000569882 CDCA7Q9BWT1 371 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-219ENST00000569882 CD163L1Q9NR16 1453 aa6.59□□□□□ -1.36
CNOT1-219ENST00000569882 BLMP54132 1417 aaPredicted RBP6.59□□□□□ -1.36
CNOT1-219ENST00000569882 LMO7Q8WWI1 1683 aa6.58□□□□□ -1.36
CNOT1-219ENST00000569882 FAM181BA6NEQ2 426 aa6.58□□□□□ -1.36
CNOT1-219ENST00000569882 FAM187AA6NFU0 413 aa6.58□□□□□ -1.36
CNOT1-219ENST00000569882 NR1I2O75469 434 aa6.58□□□□□ -1.36
CNOT1-219ENST00000569882 TNNT2P45379 298 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-219ENST00000569882 CNGB1Q14028 1251 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-219ENST00000569882 FAM182BQ5T319 152 aa6.58□□□□□ -1.36
CNOT1-219ENST00000569882 FAM196AQ6ZSG2 479 aa6.58□□□□□ -1.36
CNOT1-219ENST00000569882 BARGINQ6ZT62 677 aa6.58□□□□□ -1.36
CNOT1-219ENST00000569882 ANKRD24Q8TF21 1146 aa6.58□□□□□ -1.36
CNOT1-219ENST00000569882 KNSTRNQ9Y448 316 aa6.58□□□□□ -1.36
CNOT1-219ENST00000569882 RGPD1P0DJD0 1748 aa6.58□□□□□ -1.36
CNOT1-219ENST00000569882 MYOM1P52179 1685 aa6.58□□□□□ -1.36
CNOT1-219ENST00000569882 USP31Q70CQ4 1352 aa6.57□□□□□ -1.36
CNOT1-219ENST00000569882 CCDC7Q96M83 1385 aa6.57□□□□□ -1.36
CNOT1-219ENST00000569882 NFAT5O94916 1531 aa6.57□□□□□ -1.36
CNOT1-219ENST00000569882 ABCC6O95255 1503 aa6.57□□□□□ -1.36
CNOT1-219ENST00000569882 C11orf95C9JLR9 678 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-219ENST00000569882 EXOC5O00471 708 aa6.57□□□□□ -1.36
CNOT1-219ENST00000569882 ADH1BP00325 375 aa6.57□□□□□ -1.36
CNOT1-219ENST00000569882 GCGRP47871 477 aa6.57□□□□□ -1.36
CNOT1-219ENST00000569882 TMUB1Q9BVT8 246 aa6.57□□□□□ -1.36
CNOT1-219ENST00000569882 USP54Q70EL1 1684 aa6.57□□□□□ -1.36
CNOT1-219ENST00000569882 FAM208AQ9UK61 1670 aaKnown RBP6.57□□□□□ -1.36
CNOT1-219ENST00000569882 OVOS2A0A0J9YW53 1432 aa6.57□□□□□ -1.36
CNOT1-219ENST00000569882 OVOS2Q6IE36 1432 aa6.57□□□□□ -1.36
CNOT1-219ENST00000569882 WNK3Q9BYP7 1800 aa6.57□□□□□ -1.36
CNOT1-219ENST00000569882 THSD7AQ9UPZ6 1657 aa6.56□□□□□ -1.36
CNOT1-219ENST00000569882 WIPF1O43516 503 aa6.56□□□□□ -1.36
CNOT1-219ENST00000569882 TRIM37O94972 964 aa6.56□□□□□ -1.36
CNOT1-219ENST00000569882 RRS1Q15050 365 aaKnown RBP6.56□□□□□ -1.36
CNOT1-219ENST00000569882 MORN1Q5T089 497 aa6.56□□□□□ -1.36
CNOT1-219ENST00000569882 SULF1Q8IWU6 871 aa6.56□□□□□ -1.36
CNOT1-219ENST00000569882 CCDC102AQ96A19 550 aa6.56□□□□□ -1.36
CNOT1-219ENST00000569882 CARD10Q9BWT7 1032 aa6.56□□□□□ -1.36
CNOT1-219ENST00000569882 PANK3Q9H999 370 aa6.56□□□□□ -1.36
CNOT1-219ENST00000569882 PARP4Q9UKK3 1724 aaKnown RBP6.56□□□□□ -1.36
CNOT1-219ENST00000569882 MAP3K19Q56UN5 1328 aa6.55□□□□□ -1.36
CNOT1-219ENST00000569882 COL18A1P39060 1754 aa6.55□□□□□ -1.36
CNOT1-219ENST00000569882 FYB1O15117 783 aa6.55□□□□□ -1.36
CNOT1-219ENST00000569882 APBA3O96018 575 aa6.55□□□□□ -1.36
CNOT1-219ENST00000569882 IL2RBP14784 551 aa6.55□□□□□ -1.36
CNOT1-219ENST00000569882 HOXC9P31274 260 aa6.55□□□□□ -1.36
CNOT1-219ENST00000569882 MDM2Q00987 491 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-219ENST00000569882 SUZ12Q15022 739 aaKnown RBP6.55□□□□□ -1.36
CNOT1-219ENST00000569882 MORC1Q86VD1 984 aa6.55□□□□□ -1.36
CNOT1-219ENST00000569882 RAPGEF4Q8WZA2 1011 aa6.55□□□□□ -1.36
CNOT1-219ENST00000569882 IP6K1Q92551 441 aa6.55□□□□□ -1.36
CNOT1-219ENST00000569882 SPSB2Q99619 263 aa6.55□□□□□ -1.36
CNOT1-219ENST00000569882 SLC27A5Q9Y2P5 690 aa6.55□□□□□ -1.36
CNOT1-219ENST00000569882 OVOS2A0A0G2JMS6 1433 aa6.55□□□□□ -1.36
CNOT1-219ENST00000569882 RTL1A6NKG5 1358 aa6.55□□□□□ -1.36
CNOT1-219ENST00000569882 MAP2P11137 1827 aaKnown RBP6.55□□□□□ -1.36
CNOT1-219ENST00000569882 LRRC37A3O60309 1634 aa6.54□□□□□ -1.36
CNOT1-219ENST00000569882 ANKRD26Q9UPS8 1709 aa6.54□□□□□ -1.36
CNOT1-219ENST00000569882 ATP6V1AP38606 617 aa6.54□□□□□ -1.36
CNOT1-219ENST00000569882 PLA2G2CQ5R387 149 aa6.54□□□□□ -1.36
CNOT1-219ENST00000569882 DEFB132Q7Z7B7 95 aa6.54□□□□□ -1.36
CNOT1-219ENST00000569882 SYTL4Q96C24 671 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-219ENST00000569882 SLC6A16Q9GZN6 736 aa6.54□□□□□ -1.36
CNOT1-219ENST00000569882 NSD2O96028 1365 aa6.54□□□□□ -1.36
CNOT1-219ENST00000569882 FLT4P35916 1363 aa6.54□□□□□ -1.36
CNOT1-219ENST00000569882 TATP17735 454 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-219ENST00000569882 FBLN1P23142 703 aa6.53□□□□□ -1.36
CNOT1-219ENST00000569882 SLC19A1P41440 591 aa6.53□□□□□ -1.36
CNOT1-219ENST00000569882 LIAT1Q6ZQX7 453 aa6.53□□□□□ -1.36
CNOT1-219ENST00000569882 ANKLE1Q8NAG6 615 aa6.53□□□□□ -1.36
CNOT1-219ENST00000569882 DDX54Q8TDD1 881 aaKnown RBP6.53□□□□□ -1.36
CNOT1-219ENST00000569882 THAP11Q96EK4 314 aa6.53□□□□□ -1.36
CNOT1-219ENST00000569882 ARXQ96QS3 562 aa6.53□□□□□ -1.36
CNOT1-219ENST00000569882 CARD14Q9BXL6 1004 aa6.53□□□□□ -1.36
CNOT1-219ENST00000569882 KIF7Q2M1P5 1343 aa6.52□□□□□ -1.37
CNOT1-219ENST00000569882 TNS2Q63HR2 1409 aa6.52□□□□□ -1.37
CNOT1-219ENST00000569882 RGPD2P0DJD1 1756 aa6.52□□□□□ -1.37
CNOT1-219ENST00000569882 CD46P15529 392 aa6.52□□□□□ -1.37
CNOT1-219ENST00000569882 CC2D1BQ5T0F9 858 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms