RNA–Protein interactions for RNA: ENST00000569796.1

E4F1-209, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 5,931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-209ENST00000569796 ABCC11Q96J66 1382 aa19.6■□□□□ 0.73
E4F1-209ENST00000569796 CCDC141Q6ZP82 1450 aa19.6■□□□□ 0.73
E4F1-209ENST00000569796 GSTTP1A0A1W2PQM5 241 aa19.6■□□□□ 0.73
E4F1-209ENST00000569796 ATP5J2-PTCD1G3V325 749 aa19.6■□□□□ 0.73
E4F1-209ENST00000569796 CASQ1P31415 396 aa19.6■□□□□ 0.73
E4F1-209ENST00000569796 LARP6Q9BRS8 491 aaKnown RBP19.6■□□□□ 0.73
E4F1-209ENST00000569796 SNRKQ9NRH2 765 aa19.6■□□□□ 0.73
E4F1-209ENST00000569796 TNNT1P13805 278 aa19.6■□□□□ 0.73
E4F1-209ENST00000569796 CDC5LQ99459 802 aaKnown RBP19.6■□□□□ 0.73
E4F1-209ENST00000569796 KRT28Q7Z3Y7 464 aa19.6■□□□□ 0.73
E4F1-209ENST00000569796 KIF5CO60282 957 aa19.59■□□□□ 0.73
E4F1-209ENST00000569796 CEBPAP49715 358 aaPredicted RBP19.59■□□□□ 0.73
E4F1-209ENST00000569796 SPTY2D1Q68D10 685 aaPredicted RBP19.59■□□□□ 0.73
E4F1-209ENST00000569796 LDHAL6AQ6ZMR3 332 aa19.59■□□□□ 0.73
E4F1-209ENST00000569796 CNNM3Q8NE01 707 aa19.59■□□□□ 0.73
E4F1-209ENST00000569796 ZHX1Q9UKY1 873 aaPredicted RBP19.59■□□□□ 0.73
E4F1-209ENST00000569796 TOP1P11387 765 aaKnown RBP19.59■□□□□ 0.73
E4F1-209ENST00000569796 GTF2F1P35269 517 aaKnown RBP eCLIP19.59■□□□□ 0.731e-7■■■■■ 35.6
E4F1-209ENST00000569796 NUP88Q99567 741 aaPredicted RBP19.59■□□□□ 0.73
E4F1-209ENST00000569796 GOPCQ9HD26 462 aa19.59■□□□□ 0.73
E4F1-209ENST00000569796 CABP5Q9NP86 173 aa19.59■□□□□ 0.73
E4F1-209ENST00000569796 RARSP54136 660 aaKnown RBP19.58■□□□□ 0.73
E4F1-209ENST00000569796 CPLX3Q8WVH0 158 aa19.58■□□□□ 0.73
E4F1-209ENST00000569796 CCDC12Q8WUD4 166 aaPredicted RBP19.58■□□□□ 0.73
E4F1-209ENST00000569796 LRPPRCP42704 1394 aaKnown RBP19.58■□□□□ 0.73
E4F1-209ENST00000569796 TSPY2A6NKD2 308 aa19.58■□□□□ 0.73
E4F1-209ENST00000569796 TTF1Q15361 905 aaPredicted RBP19.58■□□□□ 0.73
E4F1-209ENST00000569796 LUZP1Q86V48 1076 aa19.58■□□□□ 0.73
E4F1-209ENST00000569796 WASLO00401 505 aaPredicted RBP19.58■□□□□ 0.72
E4F1-209ENST00000569796 CCDC183Q5T5S1 534 aa19.58■□□□□ 0.72
E4F1-209ENST00000569796 KIF18AQ8NI77 898 aa19.58■□□□□ 0.72
E4F1-209ENST00000569796 FERMT2Q96AC1 680 aa19.58■□□□□ 0.72
E4F1-209ENST00000569796 RFC4P35249 363 aa19.58■□□□□ 0.72
E4F1-209ENST00000569796 SAMM50Q9Y512 469 aa19.58■□□□□ 0.72
E4F1-209ENST00000569796 NAIPQ13075 1403 aa19.57■□□□□ 0.72
E4F1-209ENST00000569796 CEP63Q96MT8 703 aa19.57■□□□□ 0.72
E4F1-209ENST00000569796 CWC25Q9NXE8 425 aaPredicted RBP19.57■□□□□ 0.72
E4F1-209ENST00000569796 CD109Q6YHK3 1445 aa19.57■□□□□ 0.72
E4F1-209ENST00000569796 LDHCP07864 332 aa19.57■□□□□ 0.72
E4F1-209ENST00000569796 MCM3P25205 808 aa19.57■□□□□ 0.72
E4F1-209ENST00000569796 TCERG1LQ5VWI1 586 aa19.57■□□□□ 0.72
E4F1-209ENST00000569796 FLIIQ13045 1269 aa19.57■□□□□ 0.72
E4F1-209ENST00000569796 TMEM67Q5HYA8 995 aa19.57■□□□□ 0.72
E4F1-209ENST00000569796 FBXO31Q5XUX0 539 aaPredicted RBP19.57■□□□□ 0.72
E4F1-209ENST00000569796 KAT14Q9H8E8 782 aa19.57■□□□□ 0.72
E4F1-209ENST00000569796 IDEP14735 1019 aa19.57■□□□□ 0.72
E4F1-209ENST00000569796 KIF4BQ2VIQ3 1234 aa19.57■□□□□ 0.72
E4F1-209ENST00000569796 CDK13Q14004 1512 aaKnown RBP19.56■□□□□ 0.72
E4F1-209ENST00000569796 BAG3O95817 575 aa19.56■□□□□ 0.72
E4F1-209ENST00000569796 CALML4Q96GE6 196 aa19.56■□□□□ 0.72
E4F1-209ENST00000569796 ARHGEF11O15085 1522 aa19.56■□□□□ 0.72
E4F1-209ENST00000569796 USO1O60763 962 aaKnown RBP19.56■□□□□ 0.72
E4F1-209ENST00000569796 HLA-DOAP06340 250 aa19.56■□□□□ 0.72
E4F1-209ENST00000569796 CTNNA2P26232 953 aa19.56■□□□□ 0.72
E4F1-209ENST00000569796 HAND2P61296 217 aa19.56■□□□□ 0.72
E4F1-209ENST00000569796 IFNL2Q8IZJ0 200 aa19.56■□□□□ 0.72
E4F1-209ENST00000569796 TEX13AQ9BXU3 409 aaPredicted RBP19.56■□□□□ 0.72
E4F1-209ENST00000569796 CTAGE5O15320 804 aa19.56■□□□□ 0.72
E4F1-209ENST00000569796 URI1O94763 535 aaPredicted RBP19.56■□□□□ 0.72
E4F1-209ENST00000569796 MTIF2P46199 727 aaKnown RBP19.56■□□□□ 0.72
E4F1-209ENST00000569796 DRC1Q96MC2 740 aa19.56■□□□□ 0.72
E4F1-209ENST00000569796 PDE4BQ07343 736 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 CETN1Q12798 172 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 PPP1R42Q7Z4L9 355 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 RAB11FIP4Q86YS3 637 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 LIMCH1Q9UPQ0 1083 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 KIF5BP33176 963 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 AMPD3Q01432 767 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 EVI5LQ96CN4 794 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 STAMBPO95630 424 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 CKAP2LQ8IYA6 745 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 JARID2Q92833 1246 aaPredicted RBP19.55■□□□□ 0.72
E4F1-209ENST00000569796 TMX1Q9H3N1 280 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 YEATS4O95619 227 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 CCDC40Q4G0X9 1142 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 FSIP1Q8NA03 581 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 TCP11L1Q9NUJ3 509 aa19.55■□□□□ 0.72
E4F1-209ENST00000569796 UBE3BQ7Z3V4 1068 aa19.54■□□□□ 0.72
E4F1-209ENST00000569796 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
E4F1-209ENST00000569796 HOOK3Q86VS8 718 aa19.54■□□□□ 0.72
E4F1-209ENST00000569796 IFFO1Q0D2I5 559 aa19.54■□□□□ 0.72
E4F1-209ENST00000569796 USP16Q9Y5T5 823 aa19.54■□□□□ 0.72
E4F1-209ENST00000569796 PPP4R3BQ5MIZ7 849 aa19.54■□□□□ 0.72
E4F1-209ENST00000569796 STXBP4Q6ZWJ1 553 aa19.54■□□□□ 0.72
E4F1-209ENST00000569796 GCOM1H8Y6P7 765 aaPredicted RBP19.53■□□□□ 0.72
E4F1-209ENST00000569796 MYZAPP0CAP1 466 aa19.53■□□□□ 0.72
E4F1-209ENST00000569796 IARSP41252 1262 aaKnown RBP19.53■□□□□ 0.72
E4F1-209ENST00000569796 CHRNA2Q15822 529 aa19.53■□□□□ 0.72
E4F1-209ENST00000569796 MICU3Q86XE3 530 aa19.53■□□□□ 0.72
E4F1-209ENST00000569796 ST5P78524 1137 aa19.53■□□□□ 0.72
E4F1-209ENST00000569796 SMC1AQ14683 1233 aaKnown RBP19.53■□□□□ 0.72
E4F1-209ENST00000569796 SYCP3Q8IZU3 236 aa19.53■□□□□ 0.72
E4F1-209ENST00000569796 PTPRCP08575 1304 aa19.53■□□□□ 0.72
E4F1-209ENST00000569796 PPFIA3O75145 1194 aa19.53■□□□□ 0.72
E4F1-209ENST00000569796 MFSD6Q6ZSS7 791 aa19.53■□□□□ 0.72
E4F1-209ENST00000569796 PANK2Q9BZ23 570 aa19.53■□□□□ 0.72
E4F1-209ENST00000569796 ECHDC1Q9NTX5 307 aa19.53■□□□□ 0.72
E4F1-209ENST00000569796 CLIP2Q9UDT6 1046 aa19.53■□□□□ 0.72
E4F1-209ENST00000569796 COMMD10Q9Y6G5 202 aa19.53■□□□□ 0.72
E4F1-209ENST00000569796 TOPBP1Q92547 1522 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms