RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 KIF13BQ9NQT8 1826 aa18.81■□□□□ 0.6
COMMD4-225ENST00000569245 ERBB4Q15303 1308 aa18.81■□□□□ 0.6
COMMD4-225ENST00000569245 SENP3-EIF4A1A0A087X0R7 540 aa18.81■□□□□ 0.6
COMMD4-225ENST00000569245 PDE6BP35913 854 aa18.81■□□□□ 0.6
COMMD4-225ENST00000569245 HLFQ16534 295 aa18.81■□□□□ 0.6
COMMD4-225ENST00000569245 PRR5LQ6MZQ0 368 aa18.81■□□□□ 0.6
COMMD4-225ENST00000569245 BRIP1Q9BX63 1249 aa18.81■□□□□ 0.6
COMMD4-225ENST00000569245 N4BP2Q86UW6 1770 aaPredicted RBP18.81■□□□□ 0.6
COMMD4-225ENST00000569245 FAM177BA6PVY3 158 aa18.8■□□□□ 0.6
COMMD4-225ENST00000569245 RGL2O15211 777 aa18.8■□□□□ 0.6
COMMD4-225ENST00000569245 KRT24Q2M2I5 525 aa18.8■□□□□ 0.6
COMMD4-225ENST00000569245 TTLL7Q6ZT98 887 aa18.8■□□□□ 0.6
COMMD4-225ENST00000569245 ZBTB3Q9H5J0 574 aa18.8■□□□□ 0.6
COMMD4-225ENST00000569245 SCN7AQ01118 1682 aa18.79■□□□□ 0.6
COMMD4-225ENST00000569245 MAP3K15Q6ZN16 1313 aa18.79■□□□□ 0.6
COMMD4-225ENST00000569245 ERVV-1B6SEH8 477 aa18.79■□□□□ 0.6
COMMD4-225ENST00000569245 GTF2E1P29083 439 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-225ENST00000569245 TPTE2Q6XPS3 522 aa18.79■□□□□ 0.6
COMMD4-225ENST00000569245 ZNF622Q969S3 477 aaKnown RBP eCLIP18.79■□□□□ 0.6
COMMD4-225ENST00000569245 CHD4Q14839 1912 aa18.78■□□□□ 0.6
COMMD4-225ENST00000569245 ANXA1P04083 346 aa18.78■□□□□ 0.6
COMMD4-225ENST00000569245 GNAI1P63096 354 aa18.78■□□□□ 0.6
COMMD4-225ENST00000569245 TTLL6Q8N841 843 aa18.78■□□□□ 0.6
COMMD4-225ENST00000569245 MBIPQ9NS73 344 aa18.78■□□□□ 0.6
COMMD4-225ENST00000569245 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
COMMD4-225ENST00000569245 PDZRN3Q9UPQ7 1066 aa18.78■□□□□ 0.6
COMMD4-225ENST00000569245 PROSER3Q2NL68 480 aa18.77■□□□□ 0.6
COMMD4-225ENST00000569245 LAMB4A4D0S4 1761 aa18.77■□□□□ 0.6
COMMD4-225ENST00000569245 KIAA1551Q9HCM1 1747 aa18.77■□□□□ 0.59
COMMD4-225ENST00000569245 AIMP1Q12904 312 aaKnown RBP18.76■□□□□ 0.59
COMMD4-225ENST00000569245 PDIA6Q15084 440 aa18.76■□□□□ 0.59
COMMD4-225ENST00000569245 HDGFL1Q5TGJ6 251 aa18.76■□□□□ 0.59
COMMD4-225ENST00000569245 AFDNP55196 1824 aaKnown RBP18.75■□□□□ 0.59
COMMD4-225ENST00000569245 ZNF853P0CG23 659 aa18.75■□□□□ 0.59
COMMD4-225ENST00000569245 GPTP24298 496 aa18.75■□□□□ 0.59
COMMD4-225ENST00000569245 DUSP27Q5VZP5 1158 aa18.75■□□□□ 0.59
COMMD4-225ENST00000569245 HOXB7P09629 217 aa18.74■□□□□ 0.59
COMMD4-225ENST00000569245 COPS6Q7L5N1 327 aa18.74■□□□□ 0.59
COMMD4-225ENST00000569245 ZNF526Q8TF50 670 aaPredicted RBP18.74■□□□□ 0.59
COMMD4-225ENST00000569245 YTHDC1Q96MU7 727 aaKnown RBP18.74■□□□□ 0.59
COMMD4-225ENST00000569245 DDX21Q9NR30 783 aaKnown RBP eCLIP18.74■□□□□ 0.59
COMMD4-225ENST00000569245 CHPF2Q9P2E5 772 aa18.74■□□□□ 0.59
COMMD4-225ENST00000569245 NRXN2Q9P2S2 1712 aa18.74■□□□□ 0.59
COMMD4-225ENST00000569245 ELL2O00472 640 aaPredicted RBP18.73■□□□□ 0.59
COMMD4-225ENST00000569245 XAGE3Q8WTP9 111 aa18.73■□□□□ 0.59
COMMD4-225ENST00000569245 NYXQ9GZU5 481 aa18.73■□□□□ 0.59
COMMD4-225ENST00000569245 ZNF219Q9P2Y4 722 aaPredicted RBP18.73■□□□□ 0.59
COMMD4-225ENST00000569245 SALL2Q9Y467 1007 aaPredicted RBP18.73■□□□□ 0.59
COMMD4-225ENST00000569245 BCORQ6W2J9 1755 aa18.73■□□□□ 0.59
COMMD4-225ENST00000569245 GIGYF2Q6Y7W6 1299 aaKnown RBP18.72■□□□□ 0.59
COMMD4-225ENST00000569245 LRP10Q7Z4F1 713 aa18.72■□□□□ 0.59
COMMD4-225ENST00000569245 DBF4Q9UBU7 674 aaPredicted RBP18.72■□□□□ 0.59
COMMD4-225ENST00000569245 ATP10DQ9P241 1426 aa18.72■□□□□ 0.59
COMMD4-225ENST00000569245 SRGNP10124 158 aa18.71■□□□□ 0.59
COMMD4-225ENST00000569245 CCDC27Q2M243 656 aa18.71■□□□□ 0.59
COMMD4-225ENST00000569245 WWC1Q8IX03 1113 aa18.71■□□□□ 0.59
COMMD4-225ENST00000569245 CNKSR1Q969H4 720 aa18.71■□□□□ 0.59
COMMD4-225ENST00000569245 MASTLQ96GX5 879 aa18.71■□□□□ 0.59
COMMD4-225ENST00000569245 HNRNPUQ00839 825 aaKnown RBP eCLIP18.7■□□□□ 0.58
COMMD4-225ENST00000569245 C9orf131Q5VYM1 1079 aa18.7■□□□□ 0.58
COMMD4-225ENST00000569245 STYK1Q6J9G0 422 aa18.7■□□□□ 0.58
COMMD4-225ENST00000569245 NUTM1Q86Y26 1132 aa18.7■□□□□ 0.58
COMMD4-225ENST00000569245 ZNF34Q8IZ26 560 aa18.7■□□□□ 0.58
COMMD4-225ENST00000569245 GPBP1L1Q9HC44 474 aaPredicted RBP18.7■□□□□ 0.58
COMMD4-225ENST00000569245 C21orf2O43822 256 aa18.69■□□□□ 0.58
COMMD4-225ENST00000569245 ERFEQ4G0M1 354 aa18.69■□□□□ 0.58
COMMD4-225ENST00000569245 SUSD4Q5VX71 490 aa18.69■□□□□ 0.58
COMMD4-225ENST00000569245 PPP1R42Q7Z4L9 355 aa18.69■□□□□ 0.58
COMMD4-225ENST00000569245 C8orf58Q8NAV2 365 aa18.69■□□□□ 0.58
COMMD4-225ENST00000569245 HYPKQ9NX55 129 aa18.69■□□□□ 0.58
COMMD4-225ENST00000569245 UBN2Q6ZU65 1347 aa18.69■□□□□ 0.58
COMMD4-225ENST00000569245 NPR1P16066 1061 aa18.68■□□□□ 0.58
COMMD4-225ENST00000569245 PARP10Q53GL7 1025 aa18.68■□□□□ 0.58
COMMD4-225ENST00000569245 HSP90AB3PQ58FF7 597 aa18.68■□□□□ 0.58
COMMD4-225ENST00000569245 TSR2Q969E8 191 aaKnown RBP18.68■□□□□ 0.58
COMMD4-225ENST00000569245 RNF181Q9P0P0 153 aa18.68■□□□□ 0.58
COMMD4-225ENST00000569245 ADCY9O60503 1353 aa18.68■□□□□ 0.58
COMMD4-225ENST00000569245 RASSF7Q02833 373 aa18.67■□□□□ 0.58
COMMD4-225ENST00000569245 PRPF40BQ6NWY9 871 aaKnown RBP18.67■□□□□ 0.58
COMMD4-225ENST00000569245 UTP14AQ9BVJ6 771 aaKnown RBP18.67■□□□□ 0.58
COMMD4-225ENST00000569245 CHMP4AQ9BY43 222 aa18.67■□□□□ 0.58
COMMD4-225ENST00000569245 BRCA1P38398 1863 aaKnown RBP18.67■□□□□ 0.58
COMMD4-225ENST00000569245 KLRG2A4D1S0 409 aaPredicted RBP18.66■□□□□ 0.58
COMMD4-225ENST00000569245 NCBP3Q53F19 620 aaKnown RBP18.66■□□□□ 0.58
COMMD4-225ENST00000569245 ANKRD13DQ6ZTN6 518 aa18.66■□□□□ 0.58
COMMD4-225ENST00000569245 TCIRG1Q13488 830 aa18.65■□□□□ 0.58
COMMD4-225ENST00000569245 PLBD2Q8NHP8 589 aa18.65■□□□□ 0.58
COMMD4-225ENST00000569245 ZBED9Q6R2W3 1325 aa18.65■□□□□ 0.58
COMMD4-225ENST00000569245 NTSR2O95665 410 aa18.64■□□□□ 0.57
COMMD4-225ENST00000569245 LMNB1P20700 586 aa18.64■□□□□ 0.57
COMMD4-225ENST00000569245 CCDC30Q5VVM6 783 aa18.64■□□□□ 0.57
COMMD4-225ENST00000569245 RPGRQ92834 1020 aaKnown RBP18.64■□□□□ 0.57
COMMD4-225ENST00000569245 IL16Q14005 1332 aa18.64■□□□□ 0.57
COMMD4-225ENST00000569245 ANKRD31Q8N7Z5 1873 aa18.64■□□□□ 0.57
COMMD4-225ENST00000569245 ABCC12Q96J65 1359 aa18.64■□□□□ 0.57
COMMD4-225ENST00000569245 ARFGEF1Q9Y6D6 1849 aa18.63■□□□□ 0.57
COMMD4-225ENST00000569245 ALDH1B1P30837 517 aa18.63■□□□□ 0.57
COMMD4-225ENST00000569245 GOLGA2Q08379 1002 aa18.63■□□□□ 0.57
COMMD4-225ENST00000569245 SOGA3Q5TF21 947 aa18.63■□□□□ 0.57
COMMD4-225ENST00000569245 WDR63Q8IWG1 891 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms