RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 CWF19L2Q2TBE0 894 aaKnown RBP22.05■■□□□ 1.12
PKD1-235ENST00000568591 FAM13BQ9NYF5 915 aa22.05■■□□□ 1.12
PKD1-235ENST00000568591 ST3GAL1Q11201 340 aa22.05■■□□□ 1.12
PKD1-235ENST00000568591 HYPKQ9NX55 129 aa22.05■■□□□ 1.12
PKD1-235ENST00000568591 SMC3Q9UQE7 1217 aa22.04■■□□□ 1.12
PKD1-235ENST00000568591 BTBD11A6QL63 1104 aa22.04■■□□□ 1.12
PKD1-235ENST00000568591 F13A1P00488 732 aa22.04■■□□□ 1.12
PKD1-235ENST00000568591 C17orf53Q8N3J3 647 aaPredicted RBP22.04■■□□□ 1.12
PKD1-235ENST00000568591 JAKMIP1Q96N16 626 aaKnown RBP22.04■■□□□ 1.12
PKD1-235ENST00000568591 DIAPH3Q9NSV4 1193 aa22.04■■□□□ 1.12
PKD1-235ENST00000568591 DNM1Q05193 864 aaKnown RBP22.03■■□□□ 1.12
PKD1-235ENST00000568591 TMEM87AQ8NBN3 555 aa22.03■■□□□ 1.12
PKD1-235ENST00000568591 MAP3K2Q9Y2U5 619 aa22.03■■□□□ 1.12
PKD1-235ENST00000568591 GJB2P29033 226 aa22.02■■□□□ 1.12
PKD1-235ENST00000568591 NECAB1Q8N987 351 aa22.02■■□□□ 1.12
PKD1-235ENST00000568591 JARID2Q92833 1246 aaPredicted RBP22.02■■□□□ 1.12
PKD1-235ENST00000568591 EPB41L2O43491 1005 aaKnown RBP22.02■■□□□ 1.11
PKD1-235ENST00000568591 CCDC183Q5T5S1 534 aa22.02■■□□□ 1.11
PKD1-235ENST00000568591 GIMAP6Q6P9H5 292 aa22.02■■□□□ 1.11
PKD1-235ENST00000568591 DNAJC5Q9H3Z4 198 aa22.02■■□□□ 1.11
PKD1-235ENST00000568591 ARHGAP23Q9P227 1491 aa22.01■■□□□ 1.11
PKD1-235ENST00000568591 GLRX3O76003 335 aaKnown RBP22.01■■□□□ 1.11
PKD1-235ENST00000568591 TEFQ10587 303 aa22.01■■□□□ 1.11
PKD1-235ENST00000568591 ZNF530Q6P9A1 599 aaPredicted RBP22.01■■□□□ 1.11
PKD1-235ENST00000568591 IP6K1Q92551 441 aa22.01■■□□□ 1.11
PKD1-235ENST00000568591 FAM227BQ96M60 508 aa22.01■■□□□ 1.11
PKD1-235ENST00000568591 PHF14O94880 888 aa22.01■■□□□ 1.11
PKD1-235ENST00000568591 TTC12Q9H892 705 aaPredicted RBP22.01■■□□□ 1.11
PKD1-235ENST00000568591 CLASRPQ8N2M8 674 aaKnown RBP22■■□□□ 1.11
PKD1-235ENST00000568591 TCEANC2Q96MN5 208 aa22■■□□□ 1.11
PKD1-235ENST00000568591 ARID3AQ99856 593 aa22■■□□□ 1.11
PKD1-235ENST00000568591 PDRG1Q9NUG6 133 aa22■■□□□ 1.11
PKD1-235ENST00000568591 C9orf78Q9NZ63 289 aaPredicted RBP22■■□□□ 1.11
PKD1-235ENST00000568591 SLIT1O75093 1534 aa22■■□□□ 1.11
PKD1-235ENST00000568591 MCM5P33992 734 aa22■■□□□ 1.11
PKD1-235ENST00000568591 GLIPR1L2Q4G1C9 344 aa22■■□□□ 1.11
PKD1-235ENST00000568591 PDCL3Q9H2J4 239 aa22■■□□□ 1.11
PKD1-235ENST00000568591 MTMR6Q9Y217 621 aa22■■□□□ 1.11
PKD1-235ENST00000568591 USP42Q9H9J4 1324 aaKnown RBP21.99■■□□□ 1.11
PKD1-235ENST00000568591 ADCY5O95622 1261 aa21.99■■□□□ 1.11
PKD1-235ENST00000568591 ME3Q16798 604 aa21.99■■□□□ 1.11
PKD1-235ENST00000568591 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.99■■□□□ 1.11
PKD1-235ENST00000568591 TAF6LQ9Y6J9 622 aa21.99■■□□□ 1.11
PKD1-235ENST00000568591 UBE2HP62256 183 aa21.99■■□□□ 1.11
PKD1-235ENST00000568591 AACSQ86V21 672 aa21.99■■□□□ 1.11
PKD1-235ENST00000568591 ECHDC1Q9NTX5 307 aa21.99■■□□□ 1.11
PKD1-235ENST00000568591 TLR7Q9NYK1 1049 aaKnown RBP21.99■■□□□ 1.11
PKD1-235ENST00000568591 PHF8Q9UPP1 1060 aa21.99■■□□□ 1.11
PKD1-235ENST00000568591 TTC41PQ6P2S7 1318 aa21.98■■□□□ 1.11
PKD1-235ENST00000568591 TERF1P54274 439 aa21.98■■□□□ 1.11
PKD1-235ENST00000568591 FAM173BQ6P4H8 233 aa21.98■■□□□ 1.11
PKD1-235ENST00000568591 VPS37CA5D8V6 355 aaPredicted RBP21.98■■□□□ 1.11
PKD1-235ENST00000568591 AP5Z1O43299 807 aa21.98■■□□□ 1.11
PKD1-235ENST00000568591 PLCB2Q00722 1185 aa21.98■■□□□ 1.11
PKD1-235ENST00000568591 ANKARQ7Z5J8 1434 aa21.98■■□□□ 1.11
PKD1-235ENST00000568591 CCDC8Q9H0W5 538 aaPredicted RBP21.98■■□□□ 1.11
PKD1-235ENST00000568591 LTN1O94822 1766 aa21.97■■□□□ 1.11
PKD1-235ENST00000568591 PXDNQ92626 1479 aa21.97■■□□□ 1.11
PKD1-235ENST00000568591 MED1Q15648 1581 aaPredicted RBP21.97■■□□□ 1.11
PKD1-235ENST00000568591 KAZALD1Q96I82 304 aa21.97■■□□□ 1.11
PKD1-235ENST00000568591 IFIT2P09913 472 aaKnown RBP21.97■■□□□ 1.11
PKD1-235ENST00000568591 KLHDC4Q8TBB5 520 aa21.97■■□□□ 1.11
PKD1-235ENST00000568591 KIAA2012Q0VF49 1180 aa21.96■■□□□ 1.11
PKD1-235ENST00000568591 AIMP1Q12904 312 aaKnown RBP21.96■■□□□ 1.11
PKD1-235ENST00000568591 HSP90AB4PQ58FF6 505 aa21.96■■□□□ 1.11
PKD1-235ENST00000568591 FERMT3Q86UX7 667 aa21.96■■□□□ 1.11
PKD1-235ENST00000568591 TPCN1Q9ULQ1 816 aa21.96■■□□□ 1.11
PKD1-235ENST00000568591 CHMP3Q9Y3E7 222 aa21.96■■□□□ 1.11
PKD1-235ENST00000568591 RGPD2P0DJD1 1756 aa21.96■■□□□ 1.11
PKD1-235ENST00000568591 CRYBG1Q9Y4K1 1723 aa21.96■■□□□ 1.11
PKD1-235ENST00000568591 MTX1Q13505 466 aa21.96■■□□□ 1.11
PKD1-235ENST00000568591 NECTIN1Q15223 517 aa21.96■■□□□ 1.11
PKD1-235ENST00000568591 THEMISQ8N1K5 641 aaPredicted RBP21.96■■□□□ 1.11
PKD1-235ENST00000568591 EAF2Q96CJ1 260 aaPredicted RBP21.96■■□□□ 1.11
PKD1-235ENST00000568591 SUCLG2Q96I99 432 aa21.96■■□□□ 1.11
PKD1-235ENST00000568591 SIL1Q9H173 461 aa21.96■■□□□ 1.11
PKD1-235ENST00000568591 ZSWIM6Q9HCJ5 1215 aa21.96■■□□□ 1.11
PKD1-235ENST00000568591 DBF4Q9UBU7 674 aaPredicted RBP21.96■■□□□ 1.11
PKD1-235ENST00000568591 RBM8AQ9Y5S9 174 aaKnown RBP21.96■■□□□ 1.11
PKD1-235ENST00000568591 SASH1O94885 1247 aa21.95■■□□□ 1.1
PKD1-235ENST00000568591 CSPP1Q1MSJ5 1256 aa21.95■■□□□ 1.1
PKD1-235ENST00000568591 TSC1Q92574 1164 aa21.95■■□□□ 1.1
PKD1-235ENST00000568591 ZMYND15Q9H091 742 aa21.95■■□□□ 1.1
PKD1-235ENST00000568591 HOXB7P09629 217 aa21.95■■□□□ 1.1
PKD1-235ENST00000568591 NMIQ13287 307 aaPredicted RBP21.95■■□□□ 1.1
PKD1-235ENST00000568591 VPS53Q5VIR6 699 aa21.95■■□□□ 1.1
PKD1-235ENST00000568591 CYP46A1Q9Y6A2 500 aa21.95■■□□□ 1.1
PKD1-235ENST00000568591 CCDC171Q6TFL3 1326 aa21.94■■□□□ 1.1
PKD1-235ENST00000568591 KDM3BQ7LBC6 1761 aa21.94■■□□□ 1.1
PKD1-235ENST00000568591 GIGYF1O75420 1035 aaPredicted RBP21.94■■□□□ 1.1
PKD1-235ENST00000568591 AKAP4Q5JQC9 854 aa21.94■■□□□ 1.1
PKD1-235ENST00000568591 FUCA2Q9BTY2 467 aa21.94■■□□□ 1.1
PKD1-235ENST00000568591 BICC1Q9H694 974 aaKnown RBP21.94■■□□□ 1.1
PKD1-235ENST00000568591 RNMTO43148 476 aaKnown RBP21.93■■□□□ 1.1
PKD1-235ENST00000568591 CREB3L3Q68CJ9 461 aa21.93■■□□□ 1.1
PKD1-235ENST00000568591 FAM184AQ8NB25 1140 aa21.93■■□□□ 1.1
PKD1-235ENST00000568591 RUFY2Q8WXA3 655 aa21.93■■□□□ 1.1
PKD1-235ENST00000568591 A0A0D9SFI3 127 aa21.92■■□□□ 1.1
PKD1-235ENST00000568591 KCNJ4P48050 445 aa21.92■■□□□ 1.1
PKD1-235ENST00000568591 ESCO1Q5FWF5 840 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms