RNA–Protein interactions for RNA: ENST00000568530.5

PDPR-210, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPR, Length 7,223 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-210ENST00000568530 TFCP2L1Q9NZI6 479 aa9.76□□□□□ -0.85
PDPR-210ENST00000568530 PKD2L1Q9P0L9 805 aa9.76□□□□□ -0.85
PDPR-210ENST00000568530 NCBP1Q09161 790 aaKnown RBP9.75□□□□□ -0.85
PDPR-210ENST00000568530 SPATA24Q86W54 205 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 ZNF397Q8NF99 534 aaPredicted RBP9.75□□□□□ -0.85
PDPR-210ENST00000568530 RNF34Q969K3 372 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 CCDC102AQ96A19 550 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 RBM27Q9P2N5 1060 aaKnown RBP9.75□□□□□ -0.85
PDPR-210ENST00000568530 ATF7IPQ6VMQ6 1270 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 BANK1Q8NDB2 785 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 JARID2Q92833 1246 aaPredicted RBP9.75□□□□□ -0.85
PDPR-210ENST00000568530 SPATA32Q96LK8 384 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 TRMT112Q9UI30 125 aaKnown RBP9.75□□□□□ -0.85
PDPR-210ENST00000568530 PPME1Q9Y570 386 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 STK24Q9Y6E0 443 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 ANKRD18BA2A2Z9 1011 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 GCC1Q96CN9 775 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 GDPD2Q9HCC8 539 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 F6X3S4 739 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 PNISRQ8TF01 805 aaKnown RBP9.75□□□□□ -0.85
PDPR-210ENST00000568530 FCHSD2O94868 740 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 FERMT3Q86UX7 667 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 CCDC89Q8N998 374 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 FERMT1Q9BQL6 677 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 ZNF287Q9HBT7 754 aa9.75□□□□□ -0.85
PDPR-210ENST00000568530 ARID5AQ03989 594 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 FILIP1Q7Z7B0 1213 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 GAS2L2Q8NHY3 880 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 SPATA17Q96L03 361 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 ABL1P00519 1130 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 GNAI3P08754 354 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 CCDC192P0DO97 292 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 SNX16P57768 344 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 ANKLE2Q86XL3 938 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 RAB11FIP4Q86YS3 637 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 TDRD12Q587J7 1177 aaKnown RBP9.74□□□□□ -0.85
PDPR-210ENST00000568530 OGFOD1Q8N543 542 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 GPHNQ9NQX3 736 aaPredicted RBP9.74□□□□□ -0.85
PDPR-210ENST00000568530 CEP126Q9P2H0 1117 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 PDIA4P13667 645 aaKnown RBP9.74□□□□□ -0.85
PDPR-210ENST00000568530 ZBTB33Q86T24 672 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 HARSP12081 509 aaKnown RBP9.74□□□□□ -0.85
PDPR-210ENST00000568530 FBLN1P23142 703 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 CUL4BQ13620 913 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 PKNOX2Q96KN3 472 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 XRCC6P12956 609 aaKnown RBP eCLIP9.74□□□□□ -0.85
PDPR-210ENST00000568530 CWC15Q9P013 229 aaKnown RBP9.74□□□□□ -0.85
PDPR-210ENST00000568530 JAG2Q9Y219 1238 aa9.74□□□□□ -0.85
PDPR-210ENST00000568530 FNDC3AQ9Y2H6 1198 aaKnown RBP9.74□□□□□ -0.85
PDPR-210ENST00000568530 TPD52P55327 224 aaPredicted RBP9.73□□□□□ -0.85
PDPR-210ENST00000568530 DACH1Q9UI36 760 aa9.73□□□□□ -0.85
PDPR-210ENST00000568530 PPFIA1Q13136 1202 aa9.73□□□□□ -0.85
PDPR-210ENST00000568530 LRRC45Q96CN5 670 aa9.73□□□□□ -0.85
PDPR-210ENST00000568530 HDAC9Q9UKV0 1011 aa9.73□□□□□ -0.85
PDPR-210ENST00000568530 PPP2R5DQ14738 602 aa9.73□□□□□ -0.85
PDPR-210ENST00000568530 MYD88Q99836 296 aa9.73□□□□□ -0.85
PDPR-210ENST00000568530 BOLA2Q9H3K6 86 aa9.73□□□□□ -0.85
PDPR-210ENST00000568530 KIAA1107Q9UPP5 1409 aa9.73□□□□□ -0.85
PDPR-210ENST00000568530 DDX46Q7L014 1031 aaKnown RBP9.73□□□□□ -0.85
PDPR-210ENST00000568530 FAM200AQ8TCP9 573 aa9.73□□□□□ -0.85
PDPR-210ENST00000568530 TRERF1Q96PN7 1200 aa9.73□□□□□ -0.85
PDPR-210ENST00000568530 BAG4O95429 457 aaKnown RBP9.73□□□□□ -0.85
PDPR-210ENST00000568530 NOC2LQ9Y3T9 749 aaKnown RBP9.73□□□□□ -0.85
PDPR-210ENST00000568530 MRVI1Q9Y6F6 885 aa9.73□□□□□ -0.85
PDPR-210ENST00000568530 CAPN15O75808 1086 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 GEN1Q17RS7 908 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 CCDC174Q6PII3 467 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 IQSEC3Q9UPP2 1182 aaPredicted RBP9.72□□□□□ -0.85
PDPR-210ENST00000568530 DAPK1P53355 1430 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 C4orf50Q6ZRC1 276 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 JDP2Q8WYK2 163 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 TRMT1Q9NXH9 659 aaKnown RBP9.72□□□□□ -0.85
PDPR-210ENST00000568530 CALM1P0DP23 149 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 CALM2P0DP24 149 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 CALM3P0DP25 149 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 MXRA7P84157 204 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 SCAPERQ9BY12 1400 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 CRCPO75575 148 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 SSFA2P28290 1259 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 JMYQ8N9B5 988 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 PPP1R9BQ96SB3 815 aa9.72□□□□□ -0.85
PDPR-210ENST00000568530 CCT2P78371 535 aaKnown RBP9.71□□□□□ -0.85
PDPR-210ENST00000568530 FAM47CQ5HY64 1035 aa9.71□□□□□ -0.85
PDPR-210ENST00000568530 FNBP4Q8N3X1 1017 aaPredicted RBP9.71□□□□□ -0.85
PDPR-210ENST00000568530 SMC1BQ8NDV3 1235 aa9.71□□□□□ -0.85
PDPR-210ENST00000568530 RTEL1-TNFRSF6BF6WH68 1400 aa9.71□□□□□ -0.85
PDPR-210ENST00000568530 HLA-DOAP06340 250 aa9.71□□□□□ -0.85
PDPR-210ENST00000568530 PRKCSHP14314 528 aaPredicted RBP9.71□□□□□ -0.85
PDPR-210ENST00000568530 CCT4P50991 539 aaKnown RBP9.71□□□□□ -0.85
PDPR-210ENST00000568530 SPA17Q15506 151 aa9.71□□□□□ -0.85
PDPR-210ENST00000568530 CCDC65Q8IXS2 484 aa9.71□□□□□ -0.85
PDPR-210ENST00000568530 UPF3BQ9BZI7 483 aaKnown RBP9.71□□□□□ -0.85
PDPR-210ENST00000568530 RAPGEF3O95398 923 aa9.71□□□□□ -0.85
PDPR-210ENST00000568530 MCM4P33991 863 aa9.71□□□□□ -0.85
PDPR-210ENST00000568530 TMEM266Q2M3C6 531 aa9.71□□□□□ -0.85
PDPR-210ENST00000568530 LUZP1Q86V48 1076 aa9.71□□□□□ -0.85
PDPR-210ENST00000568530 IKBKGQ9Y6K9 419 aa9.71□□□□□ -0.85
PDPR-210ENST00000568530 HIP1O00291 1037 aa9.71□□□□□ -0.86
PDPR-210ENST00000568530 EXOC5O00471 708 aa9.71□□□□□ -0.86
PDPR-210ENST00000568530 PRPF40BQ6NWY9 871 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms