RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 C4AP0C0L4 1744 aa11.43□□□□□ -0.58
RPAP1-211ENST00000568413 C1QTNF8P60827 252 aa11.42□□□□□ -0.58
RPAP1-211ENST00000568413 DZIP3Q86Y13 1208 aaKnown RBP11.42□□□□□ -0.58
RPAP1-211ENST00000568413 ZNF428Q96B54 188 aa11.42□□□□□ -0.58
RPAP1-211ENST00000568413 CHPF2Q9P2E5 772 aa11.42□□□□□ -0.58
RPAP1-211ENST00000568413 TBC1D2BQ9UPU7 963 aa11.42□□□□□ -0.58
RPAP1-211ENST00000568413 KIAA1551Q9HCM1 1747 aa11.42□□□□□ -0.58
RPAP1-211ENST00000568413 USP42Q9H9J4 1324 aaKnown RBP11.41□□□□□ -0.58
RPAP1-211ENST00000568413 ERVV-1B6SEH8 477 aa11.41□□□□□ -0.58
RPAP1-211ENST00000568413 RGL2O15211 777 aa11.41□□□□□ -0.58
RPAP1-211ENST00000568413 ANXA1P04083 346 aa11.41□□□□□ -0.58
RPAP1-211ENST00000568413 SLC4A2P04920 1241 aa11.41□□□□□ -0.58
RPAP1-211ENST00000568413 GYS1P13807 737 aa11.41□□□□□ -0.58
RPAP1-211ENST00000568413 PROSER3Q2NL68 480 aa11.41□□□□□ -0.58
RPAP1-211ENST00000568413 USPL1Q5W0Q7 1092 aa11.41□□□□□ -0.58
RPAP1-211ENST00000568413 KIF6Q6ZMV9 814 aa11.41□□□□□ -0.58
RPAP1-211ENST00000568413 COPS6Q7L5N1 327 aa11.41□□□□□ -0.58
RPAP1-211ENST00000568413 LRP10Q7Z4F1 713 aa11.41□□□□□ -0.58
RPAP1-211ENST00000568413 SRP68Q9UHB9 627 aaKnown RBP11.41□□□□□ -0.58
RPAP1-211ENST00000568413 CD2APQ9Y5K6 639 aa11.41□□□□□ -0.58
RPAP1-211ENST00000568413 ATP10DQ9P241 1426 aa11.41□□□□□ -0.58
RPAP1-211ENST00000568413 CAMTA2O94983 1202 aa11.4□□□□□ -0.58
RPAP1-211ENST00000568413 CLEC4GQ6UXB4 293 aa11.4□□□□□ -0.58
RPAP1-211ENST00000568413 XAGE3Q8WTP9 111 aa11.4□□□□□ -0.58
RPAP1-211ENST00000568413 YTHDC1Q96MU7 727 aaKnown RBP11.4□□□□□ -0.58
RPAP1-211ENST00000568413 ZNF652Q9Y2D9 606 aa11.4□□□□□ -0.58
RPAP1-211ENST00000568413 KIF13BQ9NQT8 1826 aa11.39□□□□□ -0.59
RPAP1-211ENST00000568413 MAP3K15Q6ZN16 1313 aa11.39□□□□□ -0.59
RPAP1-211ENST00000568413 GRIN3BO60391 1043 aa11.39□□□□□ -0.59
RPAP1-211ENST00000568413 MMP10P09238 476 aa11.39□□□□□ -0.59
RPAP1-211ENST00000568413 AIMP1Q12904 312 aaKnown RBP11.39□□□□□ -0.59
RPAP1-211ENST00000568413 TTLL7Q6ZT98 887 aa11.39□□□□□ -0.59
RPAP1-211ENST00000568413 ANKRD13DQ6ZTN6 518 aa11.39□□□□□ -0.59
RPAP1-211ENST00000568413 ZNF526Q8TF50 670 aaPredicted RBP11.39□□□□□ -0.59
RPAP1-211ENST00000568413 TCERG1O14776 1098 aaKnown RBP11.38□□□□□ -0.59
RPAP1-211ENST00000568413 DDX58O95786 925 aaKnown RBP11.38□□□□□ -0.59
RPAP1-211ENST00000568413 FKBP8Q14318 412 aa11.38□□□□□ -0.59
RPAP1-211ENST00000568413 ALDH1L2Q3SY69 923 aa11.38□□□□□ -0.59
RPAP1-211ENST00000568413 PHAXQ9H814 394 aaKnown RBP11.38□□□□□ -0.59
RPAP1-211ENST00000568413 BCL2L12Q9HB09 334 aa11.38□□□□□ -0.59
RPAP1-211ENST00000568413 CACNA1FO60840 1977 aa11.37□□□□□ -0.59
RPAP1-211ENST00000568413 TM4SF1P30408 202 aa11.37□□□□□ -0.59
RPAP1-211ENST00000568413 GIGYF2Q6Y7W6 1299 aaKnown RBP11.37□□□□□ -0.59
RPAP1-211ENST00000568413 PLBD2Q8NHP8 589 aa11.37□□□□□ -0.59
RPAP1-211ENST00000568413 ZBTB3Q9H5J0 574 aa11.37□□□□□ -0.59
RPAP1-211ENST00000568413 PARP3Q9Y6F1 533 aa11.37□□□□□ -0.59
RPAP1-211ENST00000568413 PXDNLA1KZ92 1463 aa11.37□□□□□ -0.59
RPAP1-211ENST00000568413 HLFQ16534 295 aa11.36□□□□□ -0.59
RPAP1-211ENST00000568413 HSP90AB3PQ58FF7 597 aa11.36□□□□□ -0.59
RPAP1-211ENST00000568413 RIC3Q7Z5B4 369 aa11.36□□□□□ -0.59
RPAP1-211ENST00000568413 SSH1Q8WYL5 1049 aa11.36□□□□□ -0.59
RPAP1-211ENST00000568413 SETDB2Q96T68 719 aa11.36□□□□□ -0.59
RPAP1-211ENST00000568413 ADCY9O60503 1353 aa11.36□□□□□ -0.59
RPAP1-211ENST00000568413 RARSP54136 660 aaKnown RBP11.35□□□□□ -0.59
RPAP1-211ENST00000568413 FLIIQ13045 1269 aa11.35□□□□□ -0.59
RPAP1-211ENST00000568413 TCIRG1Q13488 830 aa11.35□□□□□ -0.59
RPAP1-211ENST00000568413 NFIXQ14938 502 aa11.35□□□□□ -0.59
RPAP1-211ENST00000568413 TBC1D9BQ66K14 1250 aa11.35□□□□□ -0.59
RPAP1-211ENST00000568413 KSR2Q6VAB6 950 aa11.35□□□□□ -0.59
RPAP1-211ENST00000568413 BICDL1Q6ZP65 573 aa11.35□□□□□ -0.59
RPAP1-211ENST00000568413 G2E3Q7L622 706 aa11.35□□□□□ -0.59
RPAP1-211ENST00000568413 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
RPAP1-211ENST00000568413 BRCA1P38398 1863 aaKnown RBP11.35□□□□□ -0.59
RPAP1-211ENST00000568413 C10orf71Q711Q0 1435 aa11.35□□□□□ -0.59
RPAP1-211ENST00000568413 A0A0G2JLW4 131 aa11.34□□□□□ -0.59
RPAP1-211ENST00000568413 BRPF1P55201 1214 aaPredicted RBP11.34□□□□□ -0.59
RPAP1-211ENST00000568413 FKBP5Q13451 457 aaPredicted RBP11.34□□□□□ -0.59
RPAP1-211ENST00000568413 ZNF34Q8IZ26 560 aa11.34□□□□□ -0.59
RPAP1-211ENST00000568413 SMC4Q9NTJ3 1288 aa11.34□□□□□ -0.59
RPAP1-211ENST00000568413 NIP7Q9Y221 180 aaKnown RBP eCLIP11.34□□□□□ -0.59
RPAP1-211ENST00000568413 PI4KAP2A4QPH2 592 aa11.33□□□□□ -0.6
RPAP1-211ENST00000568413 POLRMTO00411 1230 aaKnown RBP11.33□□□□□ -0.6
RPAP1-211ENST00000568413 SERPINB2P05120 415 aa11.33□□□□□ -0.6
RPAP1-211ENST00000568413 PI4KAP1Q8N8J0 262 aa11.33□□□□□ -0.6
RPAP1-211ENST00000568413 BCS1LQ9Y276 419 aa11.33□□□□□ -0.6
RPAP1-211ENST00000568413 MAP3K2Q9Y2U5 619 aa11.33□□□□□ -0.6
RPAP1-211ENST00000568413 NUP98P52948 1817 aa11.32□□□□□ -0.6
RPAP1-211ENST00000568413 CARMIL3Q8ND23 1372 aa11.32□□□□□ -0.6
RPAP1-211ENST00000568413 BCORQ6W2J9 1755 aa11.32□□□□□ -0.6
RPAP1-211ENST00000568413 DPEP1P16444 411 aa11.32□□□□□ -0.6
RPAP1-211ENST00000568413 DDR1Q08345 913 aa11.32□□□□□ -0.6
RPAP1-211ENST00000568413 NEXNQ0ZGT2 675 aa11.32□□□□□ -0.6
RPAP1-211ENST00000568413 TRIM28Q13263 835 aaKnown RBP11.32□□□□□ -0.6
RPAP1-211ENST00000568413 PARP10Q53GL7 1025 aa11.32□□□□□ -0.6
RPAP1-211ENST00000568413 TPTE2Q6XPS3 522 aa11.32□□□□□ -0.6
RPAP1-211ENST00000568413 PPP1R42Q7Z4L9 355 aa11.32□□□□□ -0.6
RPAP1-211ENST00000568413 METTL22Q9BUU2 404 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-211ENST00000568413 BCL2L13Q9BXK5 485 aa11.32□□□□□ -0.6
RPAP1-211ENST00000568413 NYXQ9GZU5 481 aa11.32□□□□□ -0.6
RPAP1-211ENST00000568413 GPBP1L1Q9HC44 474 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-211ENST00000568413 SCN7AQ01118 1682 aa11.32□□□□□ -0.6
RPAP1-211ENST00000568413 PTPRCP08575 1304 aa11.32□□□□□ -0.6
RPAP1-211ENST00000568413 AFDNP55196 1824 aaKnown RBP11.31□□□□□ -0.6
RPAP1-211ENST00000568413 NPHP1O15259 732 aa11.31□□□□□ -0.6
RPAP1-211ENST00000568413 IPO8O15397 1037 aaKnown RBP11.31□□□□□ -0.6
RPAP1-211ENST00000568413 GPTP24298 496 aa11.31□□□□□ -0.6
RPAP1-211ENST00000568413 NBPF5PQ86XG9 351 aaPredicted RBP11.31□□□□□ -0.6
RPAP1-211ENST00000568413 DNAAF4Q8WXU2 420 aa11.31□□□□□ -0.6
RPAP1-211ENST00000568413 MYD88Q99836 296 aa11.31□□□□□ -0.6
RPAP1-211ENST00000568413 ISCA1Q9BUE6 129 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 1243.8 ms