RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 HDGFL1Q5TGJ6 251 aa16.86■□□□□ 0.29
CNOT1-213ENST00000568158 CD2APQ9Y5K6 639 aa16.86■□□□□ 0.29
CNOT1-213ENST00000568158 ERBB4Q15303 1308 aa16.86■□□□□ 0.29
CNOT1-213ENST00000568158 HOXB7P09629 217 aa16.85■□□□□ 0.29
CNOT1-213ENST00000568158 AIMP1Q12904 312 aaKnown RBP16.85■□□□□ 0.29
CNOT1-213ENST00000568158 CNKSR2Q8WXI2 1034 aa16.85■□□□□ 0.29
CNOT1-213ENST00000568158 DDX21Q9NR30 783 aaKnown RBP eCLIP16.85■□□□□ 0.29
CNOT1-213ENST00000568158 CHPF2Q9P2E5 772 aa16.85■□□□□ 0.29
CNOT1-213ENST00000568158 CLEC4GQ6UXB4 293 aa16.84■□□□□ 0.29
CNOT1-213ENST00000568158 COPS6Q7L5N1 327 aa16.84■□□□□ 0.29
CNOT1-213ENST00000568158 TCERG1O14776 1098 aaKnown RBP16.83■□□□□ 0.28
CNOT1-213ENST00000568158 MAP3K15Q6ZN16 1313 aa16.83■□□□□ 0.28
CNOT1-213ENST00000568158 XAGE3Q8WTP9 111 aa16.83■□□□□ 0.28
CNOT1-213ENST00000568158 ZNF521Q96K83 1311 aa16.83■□□□□ 0.28
CNOT1-213ENST00000568158 SETDB2Q96T68 719 aa16.83■□□□□ 0.28
CNOT1-213ENST00000568158 ZBTB3Q9H5J0 574 aa16.83■□□□□ 0.28
CNOT1-213ENST00000568158 FANCIQ9NVI1 1328 aa16.82■□□□□ 0.28
CNOT1-213ENST00000568158 A0A0G2JLW4 131 aa16.82■□□□□ 0.28
CNOT1-213ENST00000568158 ERVV-1B6SEH8 477 aa16.82■□□□□ 0.28
CNOT1-213ENST00000568158 EXOSC9Q06265 439 aaKnown RBP16.82■□□□□ 0.28
CNOT1-213ENST00000568158 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
CNOT1-213ENST00000568158 KIF6Q6ZMV9 814 aa16.82■□□□□ 0.28
CNOT1-213ENST00000568158 CCDC24Q8N4L8 307 aa16.82■□□□□ 0.28
CNOT1-213ENST00000568158 DBF4Q9UBU7 674 aaPredicted RBP16.82■□□□□ 0.28
CNOT1-213ENST00000568158 WWC3Q9ULE0 1092 aa16.82■□□□□ 0.28
CNOT1-213ENST00000568158 FAM177BA6PVY3 158 aa16.81■□□□□ 0.28
CNOT1-213ENST00000568158 TWISTNBQ3B726 338 aaPredicted RBP16.81■□□□□ 0.28
CNOT1-213ENST00000568158 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
CNOT1-213ENST00000568158 NIP7Q9Y221 180 aaKnown RBP eCLIP16.81■□□□□ 0.28
CNOT1-213ENST00000568158 ZNF652Q9Y2D9 606 aa16.81■□□□□ 0.28
CNOT1-213ENST00000568158 AFDNP55196 1824 aaKnown RBP16.8■□□□□ 0.28
CNOT1-213ENST00000568158 PHAXQ9H814 394 aaKnown RBP16.8■□□□□ 0.28
CNOT1-213ENST00000568158 VAMP4O75379 141 aa16.79■□□□□ 0.28
CNOT1-213ENST00000568158 DPEP1P16444 411 aa16.79■□□□□ 0.28
CNOT1-213ENST00000568158 TGFB2P61812 414 aa16.79■□□□□ 0.28
CNOT1-213ENST00000568158 GPR162Q16538 588 aa16.79■□□□□ 0.28
CNOT1-213ENST00000568158 CCDC30Q5VVM6 783 aa16.79■□□□□ 0.28
CNOT1-213ENST00000568158 GIGYF2Q6Y7W6 1299 aaKnown RBP16.79■□□□□ 0.28
CNOT1-213ENST00000568158 CDCA7LQ96GN5 454 aa16.79■□□□□ 0.28
CNOT1-213ENST00000568158 MYH16Q9H6N6 1097 aa16.79■□□□□ 0.28
CNOT1-213ENST00000568158 HYPKQ9NX55 129 aa16.79■□□□□ 0.28
CNOT1-213ENST00000568158 NUP98P52948 1817 aa16.79■□□□□ 0.28
CNOT1-213ENST00000568158 BCORQ6W2J9 1755 aa16.79■□□□□ 0.28
CNOT1-213ENST00000568158 SCN7AQ01118 1682 aa16.78■□□□□ 0.28
CNOT1-213ENST00000568158 GPTP24298 496 aa16.78■□□□□ 0.28
CNOT1-213ENST00000568158 PRR5LQ6MZQ0 368 aa16.78■□□□□ 0.28
CNOT1-213ENST00000568158 RGL2O15211 777 aa16.77■□□□□ 0.28
CNOT1-213ENST00000568158 KCNA3P22001 575 aa16.77■□□□□ 0.28
CNOT1-213ENST00000568158 CHRNA5P30532 468 aa16.77■□□□□ 0.28
CNOT1-213ENST00000568158 ANKRD13DQ6ZTN6 518 aa16.77■□□□□ 0.28
CNOT1-213ENST00000568158 C10orf71Q711Q0 1435 aa16.77■□□□□ 0.27
CNOT1-213ENST00000568158 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.27
CNOT1-213ENST00000568158 KIF13BQ9NQT8 1826 aa16.76■□□□□ 0.27
CNOT1-213ENST00000568158 YBX3P16989 372 aaKnown RBP eCLIP16.76■□□□□ 0.27
CNOT1-213ENST00000568158 SLFN5Q08AF3 891 aa16.76■□□□□ 0.27
CNOT1-213ENST00000568158 NBPF5PQ86XG9 351 aaPredicted RBP16.76■□□□□ 0.27
CNOT1-213ENST00000568158 ZNF34Q8IZ26 560 aa16.76■□□□□ 0.27
CNOT1-213ENST00000568158 N4BP2Q86UW6 1770 aaPredicted RBP16.76■□□□□ 0.27
CNOT1-213ENST00000568158 NPHP1O15259 732 aa16.75■□□□□ 0.27
CNOT1-213ENST00000568158 SUSD4Q5VX71 490 aa16.75■□□□□ 0.27
CNOT1-213ENST00000568158 TPTE2Q6XPS3 522 aa16.75■□□□□ 0.27
CNOT1-213ENST00000568158 G2E3Q7L622 706 aa16.75■□□□□ 0.27
CNOT1-213ENST00000568158 PLBD2Q8NHP8 589 aa16.75■□□□□ 0.27
CNOT1-213ENST00000568158 ZNF428Q96B54 188 aa16.75■□□□□ 0.27
CNOT1-213ENST00000568158 CHMP4AQ9BY43 222 aa16.75■□□□□ 0.27
CNOT1-213ENST00000568158 NRXN2Q9P2S2 1712 aa16.75■□□□□ 0.27
CNOT1-213ENST00000568158 PXDNLA1KZ92 1463 aa16.74■□□□□ 0.27
CNOT1-213ENST00000568158 E9PSI1 815 aa16.74■□□□□ 0.27
CNOT1-213ENST00000568158 SLC4A2P04920 1241 aa16.74■□□□□ 0.27
CNOT1-213ENST00000568158 TCIRG1Q13488 830 aa16.74■□□□□ 0.27
CNOT1-213ENST00000568158 POTEHQ6S545 545 aa16.74■□□□□ 0.27
CNOT1-213ENST00000568158 CNBD1Q8NA66 436 aa16.74■□□□□ 0.27
CNOT1-213ENST00000568158 UBN2Q6ZU65 1347 aa16.73■□□□□ 0.27
CNOT1-213ENST00000568158 RIC3Q7Z5B4 369 aa16.73■□□□□ 0.27
CNOT1-213ENST00000568158 NUTM1Q86Y26 1132 aa16.73■□□□□ 0.27
CNOT1-213ENST00000568158 C2CD5Q86YS7 1000 aa16.73■□□□□ 0.27
CNOT1-213ENST00000568158 BRIP1Q9BX63 1249 aa16.73■□□□□ 0.27
CNOT1-213ENST00000568158 STK31Q9BXU1 1019 aa16.73■□□□□ 0.27
CNOT1-213ENST00000568158 GTF2E1P29083 439 aaPredicted RBP16.72■□□□□ 0.27
CNOT1-213ENST00000568158 ST5P78524 1137 aa16.72■□□□□ 0.27
CNOT1-213ENST00000568158 HNRNPUQ00839 825 aaKnown RBP eCLIP16.72■□□□□ 0.27
CNOT1-213ENST00000568158 PIM2Q9P1W9 311 aa16.72■□□□□ 0.27
CNOT1-213ENST00000568158 BCS1LQ9Y276 419 aa16.72■□□□□ 0.27
CNOT1-213ENST00000568158 KIAA1551Q9HCM1 1747 aa16.72■□□□□ 0.27
CNOT1-213ENST00000568158 ATP5J2-PTCD1G3V325 749 aa16.71■□□□□ 0.27
CNOT1-213ENST00000568158 H0YIN7 160 aa16.71■□□□□ 0.27
CNOT1-213ENST00000568158 PDE6BP35913 854 aa16.71■□□□□ 0.27
CNOT1-213ENST00000568158 ERFEQ4G0M1 354 aa16.71■□□□□ 0.27
CNOT1-213ENST00000568158 HSP90AB3PQ58FF7 597 aa16.71■□□□□ 0.27
CNOT1-213ENST00000568158 TRMT2AQ8IZ69 625 aaKnown RBP16.71■□□□□ 0.27
CNOT1-213ENST00000568158 ATP10DQ9P241 1426 aa16.7■□□□□ 0.26
CNOT1-213ENST00000568158 PARP10Q53GL7 1025 aa16.7■□□□□ 0.26
CNOT1-213ENST00000568158 PPP1R42Q7Z4L9 355 aa16.7■□□□□ 0.26
CNOT1-213ENST00000568158 NLRP10Q86W26 655 aa16.7■□□□□ 0.26
CNOT1-213ENST00000568158 NYXQ9GZU5 481 aa16.7■□□□□ 0.26
CNOT1-213ENST00000568158 ANKRD31Q8N7Z5 1873 aa16.69■□□□□ 0.26
CNOT1-213ENST00000568158 NTSR2O95665 410 aa16.69■□□□□ 0.26
CNOT1-213ENST00000568158 SYNE4Q8N205 404 aa16.69■□□□□ 0.26
CNOT1-213ENST00000568158 ZNF622Q969S3 477 aaKnown RBP eCLIP16.69■□□□□ 0.263e-9■□□□□ 9
CNOT1-213ENST00000568158 MYD88Q99836 296 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms