RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 MRPL14Q6P1L8 145 aaKnown RBP8.44□□□□□ -1.06
CAPN3-218ENST00000568153 SEPT12Q8IYM1 358 aa8.44□□□□□ -1.06
CAPN3-218ENST00000568153 POLR3GLQ9BT43 218 aa8.44□□□□□ -1.06
CAPN3-218ENST00000568153 C1orf115Q9H7X2 142 aa8.44□□□□□ -1.06
CAPN3-218ENST00000568153 C14orf93Q9H972 538 aaKnown RBP8.44□□□□□ -1.06
CAPN3-218ENST00000568153 KIF7Q2M1P5 1343 aa8.44□□□□□ -1.06
CAPN3-218ENST00000568153 GPRASP1Q5JY77 1395 aa8.44□□□□□ -1.06
CAPN3-218ENST00000568153 REREQ9P2R6 1566 aa8.44□□□□□ -1.06
CAPN3-218ENST00000568153 BCORL1Q5H9F3 1711 aa8.43□□□□□ -1.06
CAPN3-218ENST00000568153 KIF13AQ9H1H9 1805 aa8.43□□□□□ -1.06
CAPN3-218ENST00000568153 SLFNL1Q499Z3 407 aa8.43□□□□□ -1.06
CAPN3-218ENST00000568153 MEIOBQ8N635 442 aa8.43□□□□□ -1.06
CAPN3-218ENST00000568153 KIFC2Q96AC6 838 aa8.43□□□□□ -1.06
CAPN3-218ENST00000568153 ERVH48-1M5A8F1 160 aa8.42□□□□□ -1.06
CAPN3-218ENST00000568153 TMF1P82094 1093 aa8.42□□□□□ -1.06
CAPN3-218ENST00000568153 TSGA10IPQ3SY00 556 aa8.42□□□□□ -1.06
CAPN3-218ENST00000568153 RNF135Q8IUD6 432 aa8.42□□□□□ -1.06
CAPN3-218ENST00000568153 ZNF775Q96BV0 537 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-218ENST00000568153 ZFP42Q96MM3 310 aa8.42□□□□□ -1.06
CAPN3-218ENST00000568153 CCDC85AQ96PX6 553 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-218ENST00000568153 NEURL4Q96JN8 1562 aa8.41□□□□□ -1.06
CAPN3-218ENST00000568153 CCER2I3L3R5 266 aa8.41□□□□□ -1.06
CAPN3-218ENST00000568153 DHX9Q08211 1270 aaKnown RBP8.41□□□□□ -1.06
CAPN3-218ENST00000568153 CDCA8Q53HL2 280 aa8.41□□□□□ -1.06
CAPN3-218ENST00000568153 RNF20Q5VTR2 975 aa8.41□□□□□ -1.06
CAPN3-218ENST00000568153 TESK2Q96S53 571 aa8.41□□□□□ -1.06
CAPN3-218ENST00000568153 TMPRSS4Q9NRS4 437 aa8.41□□□□□ -1.06
CAPN3-218ENST00000568153 CLTCL1P53675 1640 aa8.4□□□□□ -1.06
CAPN3-218ENST00000568153 TBC1D9Q6ZT07 1266 aa8.4□□□□□ -1.06
CAPN3-218ENST00000568153 Q6ZVU0 165 aa8.4□□□□□ -1.06
CAPN3-218ENST00000568153 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.4□□□□□ -1.06
CAPN3-218ENST00000568153 PURBQ96QR8 312 aaKnown RBP8.4□□□□□ -1.06
CAPN3-218ENST00000568153 PGPEP1Q9NXJ5 209 aa8.4□□□□□ -1.06
CAPN3-218ENST00000568153 CBLBQ13191 982 aa8.39□□□□□ -1.07
CAPN3-218ENST00000568153 SCARF1Q14162 830 aa8.39□□□□□ -1.07
CAPN3-218ENST00000568153 TMEM132EQ6IEE7 984 aa8.39□□□□□ -1.07
CAPN3-218ENST00000568153 LINC00528Q8N1L1 170 aa8.39□□□□□ -1.07
CAPN3-218ENST00000568153 CDCA7Q9BWT1 371 aaPredicted RBP8.39□□□□□ -1.07
CAPN3-218ENST00000568153 SPHKAPQ2M3C7 1700 aa8.39□□□□□ -1.07
CAPN3-218ENST00000568153 UGGT1Q9NYU2 1555 aa8.39□□□□□ -1.07
CAPN3-218ENST00000568153 CENPBP07199 599 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-218ENST00000568153 SKIP12755 728 aa8.38□□□□□ -1.07
CAPN3-218ENST00000568153 CEBPAP49715 358 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-218ENST00000568153 PLPP7Q8NBV4 271 aa8.38□□□□□ -1.07
CAPN3-218ENST00000568153 ZNF784Q8NCA9 323 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-218ENST00000568153 NFATC2IPQ8NCF5 419 aa8.38□□□□□ -1.07
CAPN3-218ENST00000568153 TRAK1Q9UPV9 953 aa8.38□□□□□ -1.07
CAPN3-218ENST00000568153 PCDHB11Q9Y5F2 797 aa8.38□□□□□ -1.07
CAPN3-218ENST00000568153 MYOM2P54296 1465 aa8.38□□□□□ -1.07
CAPN3-218ENST00000568153 ERVK-7P63135 1459 aa8.38□□□□□ -1.07
CAPN3-218ENST00000568153 ZFYVE9O95405 1425 aa8.37□□□□□ -1.07
CAPN3-218ENST00000568153 CEP152O94986 1710 aa8.37□□□□□ -1.07
CAPN3-218ENST00000568153 EIF3AQ14152 1382 aaKnown RBP8.37□□□□□ -1.07
CAPN3-218ENST00000568153 LILRA1O75019 489 aa8.37□□□□□ -1.07
CAPN3-218ENST00000568153 CCDC125Q86Z20 511 aa8.37□□□□□ -1.07
CAPN3-218ENST00000568153 CCDC82Q8N4S0 544 aa8.37□□□□□ -1.07
CAPN3-218ENST00000568153 PPP1R12CQ9BZL4 782 aa8.37□□□□□ -1.07
CAPN3-218ENST00000568153 TFIP11Q9UBB9 837 aaKnown RBP8.37□□□□□ -1.07
CAPN3-218ENST00000568153 DOLKQ9UPQ8 538 aa8.37□□□□□ -1.07
CAPN3-218ENST00000568153 ARHGEF40Q8TER5 1519 aa8.37□□□□□ -1.07
CAPN3-218ENST00000568153 SCAF11Q99590 1463 aaKnown RBP8.37□□□□□ -1.07
CAPN3-218ENST00000568153 CAMSAP1Q5T5Y3 1602 aa8.36□□□□□ -1.07
CAPN3-218ENST00000568153 TNRQ92752 1358 aa8.36□□□□□ -1.07
CAPN3-218ENST00000568153 PALM3A6NDB9 673 aaPredicted RBP8.36□□□□□ -1.07
CAPN3-218ENST00000568153 USP17L5A8MUK1 530 aa8.36□□□□□ -1.07
CAPN3-218ENST00000568153 ATP9BO43861 1147 aa8.36□□□□□ -1.07
CAPN3-218ENST00000568153 SCTRP47872 440 aa8.36□□□□□ -1.07
CAPN3-218ENST00000568153 C6orf118Q5T5N4 469 aa8.36□□□□□ -1.07
CAPN3-218ENST00000568153 YTHDC1Q96MU7 727 aaKnown RBP8.36□□□□□ -1.07
CAPN3-218ENST00000568153 TSEN34Q9BSV6 310 aaKnown RBP8.36□□□□□ -1.07
CAPN3-218ENST00000568153 CYLDQ9NQC7 956 aa8.36□□□□□ -1.07
CAPN3-218ENST00000568153 NRXN1Q9ULB1 1477 aa8.36□□□□□ -1.07
CAPN3-218ENST00000568153 ZC3H13Q5T200 1668 aaKnown RBP8.36□□□□□ -1.07
CAPN3-218ENST00000568153 BMP2P12643 396 aa8.35□□□□□ -1.07
CAPN3-218ENST00000568153 ADD1P35611 737 aaKnown RBP8.35□□□□□ -1.07
CAPN3-218ENST00000568153 MAP7D1Q3KQU3 841 aa8.35□□□□□ -1.07
CAPN3-218ENST00000568153 OXLD1Q5BKU9 147 aa8.35□□□□□ -1.07
CAPN3-218ENST00000568153 THEMISQ8N1K5 641 aaPredicted RBP8.35□□□□□ -1.07
CAPN3-218ENST00000568153 DEPDC4Q8N2C3 294 aa8.35□□□□□ -1.07
CAPN3-218ENST00000568153 PRKRIP1Q9H875 184 aaPredicted RBP8.35□□□□□ -1.07
CAPN3-218ENST00000568153 PANK3Q9H999 370 aa8.35□□□□□ -1.07
CAPN3-218ENST00000568153 STK26Q9P289 416 aa8.35□□□□□ -1.07
CAPN3-218ENST00000568153 ADGRB3O60242 1522 aa8.34□□□□□ -1.07
CAPN3-218ENST00000568153 CENPJQ9HC77 1338 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-218ENST00000568153 TRPM1Q7Z4N2 1603 aa8.34□□□□□ -1.07
CAPN3-218ENST00000568153 UPP2O95045 317 aa8.34□□□□□ -1.07
CAPN3-218ENST00000568153 ERVK-9P63128 1117 aa8.34□□□□□ -1.07
CAPN3-218ENST00000568153 LCE2AQ5TA79 106 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-218ENST00000568153 CCDC97Q96F63 343 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-218ENST00000568153 MAFBQ9Y5Q3 323 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-218ENST00000568153 EID1Q9Y6B2 187 aa8.34□□□□□ -1.07
CAPN3-218ENST00000568153 PIK3C2GO75747 1445 aa8.34□□□□□ -1.07
CAPN3-218ENST00000568153 SYNMO15061 1565 aa8.34□□□□□ -1.07
CAPN3-218ENST00000568153 SOS2Q07890 1332 aaPredicted RBP8.33□□□□□ -1.08
CAPN3-218ENST00000568153 USP17L3A6NCW0 530 aa8.33□□□□□ -1.08
CAPN3-218ENST00000568153 USP17L4A6NCW7 530 aa8.33□□□□□ -1.08
CAPN3-218ENST00000568153 NCOA4Q13772 614 aa8.33□□□□□ -1.08
CAPN3-218ENST00000568153 RALBP1Q15311 655 aa8.33□□□□□ -1.08
CAPN3-218ENST00000568153 CC2D2BQ6DHV5 1058 aa8.33□□□□□ -1.08
CAPN3-218ENST00000568153 USP17L2Q6R6M4 530 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms