RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 RGL2O15211 777 aa9.07□□□□□ -0.96
SF3B3-209ENST00000567635 PDE6BP35913 854 aa9.07□□□□□ -0.96
SF3B3-209ENST00000567635 C2CD5Q86YS7 1000 aa9.07□□□□□ -0.96
SF3B3-209ENST00000567635 NGEFQ8N5V2 710 aa9.07□□□□□ -0.96
SF3B3-209ENST00000567635 TTLL6Q8N841 843 aa9.07□□□□□ -0.96
SF3B3-209ENST00000567635 BRIP1Q9BX63 1249 aa9.07□□□□□ -0.96
SF3B3-209ENST00000567635 PDZRN3Q9UPQ7 1066 aa9.07□□□□□ -0.96
SF3B3-209ENST00000567635 CARMIL3Q8ND23 1372 aa9.07□□□□□ -0.96
SF3B3-209ENST00000567635 ZNF316A6NFI3 1004 aaPredicted RBP9.06□□□□□ -0.96
SF3B3-209ENST00000567635 NPHP1O15259 732 aa9.06□□□□□ -0.96
SF3B3-209ENST00000567635 SLC4A2P04920 1241 aa9.06□□□□□ -0.96
SF3B3-209ENST00000567635 PRR5LQ6MZQ0 368 aa9.06□□□□□ -0.96
SF3B3-209ENST00000567635 TRIM35Q9UPQ4 493 aa9.06□□□□□ -0.96
SF3B3-209ENST00000567635 ATP10DQ9P241 1426 aa9.05□□□□□ -0.96
SF3B3-209ENST00000567635 CACNA1SQ13698 1873 aa9.05□□□□□ -0.96
SF3B3-209ENST00000567635 ERVV-1B6SEH8 477 aa9.05□□□□□ -0.96
SF3B3-209ENST00000567635 CHL1O00533 1208 aa9.05□□□□□ -0.96
SF3B3-209ENST00000567635 MYL6BP14649 208 aa9.05□□□□□ -0.96
SF3B3-209ENST00000567635 EIF2S2P20042 333 aaKnown RBP9.05□□□□□ -0.96
SF3B3-209ENST00000567635 C1QTNF8P60827 252 aa9.05□□□□□ -0.96
SF3B3-209ENST00000567635 ST5P78524 1137 aa9.05□□□□□ -0.96
SF3B3-209ENST00000567635 HLFQ16534 295 aa9.05□□□□□ -0.96
SF3B3-209ENST00000567635 TPTE2Q6XPS3 522 aa9.05□□□□□ -0.96
SF3B3-209ENST00000567635 NBPF5PQ86XG9 351 aaPredicted RBP9.05□□□□□ -0.96
SF3B3-209ENST00000567635 CCDC24Q8N4L8 307 aa9.05□□□□□ -0.96
SF3B3-209ENST00000567635 CNBD1Q8NA66 436 aa9.05□□□□□ -0.96
SF3B3-209ENST00000567635 ZNF622Q969S3 477 aaKnown RBP eCLIP9.05□□□□□ -0.964e-20■□□□□ 8.5
SF3B3-209ENST00000567635 GPBP1L1Q9HC44 474 aaPredicted RBP9.05□□□□□ -0.96
SF3B3-209ENST00000567635 NIP7Q9Y221 180 aaKnown RBP eCLIP9.05□□□□□ -0.96
SF3B3-209ENST00000567635 LAS1LQ9Y4W2 734 aaKnown RBP9.05□□□□□ -0.96
SF3B3-209ENST00000567635 ADCY9O60503 1353 aa9.04□□□□□ -0.96
SF3B3-209ENST00000567635 SLX4Q8IY92 1834 aa9.04□□□□□ -0.96
SF3B3-209ENST00000567635 C1QBPQ07021 282 aaKnown RBP9.04□□□□□ -0.96
SF3B3-209ENST00000567635 C9orf131Q5VYM1 1079 aa9.04□□□□□ -0.96
SF3B3-209ENST00000567635 KIF6Q6ZMV9 814 aa9.04□□□□□ -0.96
SF3B3-209ENST00000567635 ZNF526Q8TF50 670 aaPredicted RBP9.04□□□□□ -0.96
SF3B3-209ENST00000567635 ERBB4Q15303 1308 aa9.04□□□□□ -0.96
SF3B3-209ENST00000567635 MAP3K15Q6ZN16 1313 aa9.04□□□□□ -0.96
SF3B3-209ENST00000567635 APAF1O14727 1248 aa9.03□□□□□ -0.96
SF3B3-209ENST00000567635 SRGNP10124 158 aa9.03□□□□□ -0.96
SF3B3-209ENST00000567635 GTF2E1P29083 439 aaPredicted RBP9.03□□□□□ -0.96
SF3B3-209ENST00000567635 PDIA6Q15084 440 aa9.03□□□□□ -0.96
SF3B3-209ENST00000567635 STYK1Q6J9G0 422 aa9.03□□□□□ -0.96
SF3B3-209ENST00000567635 TTLL7Q6ZT98 887 aa9.03□□□□□ -0.96
SF3B3-209ENST00000567635 CNKSR1Q969H4 720 aa9.03□□□□□ -0.96
SF3B3-209ENST00000567635 DICER1Q9UPY3 1922 aaKnown RBP9.03□□□□□ -0.96
SF3B3-209ENST00000567635 FER1L6Q2WGJ9 1857 aa9.02□□□□□ -0.96
SF3B3-209ENST00000567635 FAM177BA6PVY3 158 aa9.02□□□□□ -0.97
SF3B3-209ENST00000567635 MASTLQ96GX5 879 aa9.02□□□□□ -0.97
SF3B3-209ENST00000567635 CFAP44Q96MT7 982 aa9.02□□□□□ -0.97
SF3B3-209ENST00000567635 NYXQ9GZU5 481 aa9.02□□□□□ -0.97
SF3B3-209ENST00000567635 RNF181Q9P0P0 153 aa9.02□□□□□ -0.97
SF3B3-209ENST00000567635 KLRG2A4D1S0 409 aaPredicted RBP9.01□□□□□ -0.97
SF3B3-209ENST00000567635 ANP32CO43423 234 aa9.01□□□□□ -0.97
SF3B3-209ENST00000567635 C21orf2O43822 256 aa9.01□□□□□ -0.97
SF3B3-209ENST00000567635 COL11A2P13942 1736 aaPredicted RBP9.01□□□□□ -0.97
SF3B3-209ENST00000567635 NPR1P16066 1061 aa9.01□□□□□ -0.97
SF3B3-209ENST00000567635 LMNB1P20700 586 aa9.01□□□□□ -0.97
SF3B3-209ENST00000567635 CALD1Q05682 793 aaKnown RBP9.01□□□□□ -0.97
SF3B3-209ENST00000567635 CCDC184Q52MB2 194 aa9.01□□□□□ -0.97
SF3B3-209ENST00000567635 GIGYF2Q6Y7W6 1299 aaKnown RBP9.01□□□□□ -0.97
SF3B3-209ENST00000567635 NECTIN2Q92692 538 aa9.01□□□□□ -0.97
SF3B3-209ENST00000567635 ZBTB3Q9H5J0 574 aa9.01□□□□□ -0.97
SF3B3-209ENST00000567635 ZNF219Q9P2Y4 722 aaPredicted RBP9.01□□□□□ -0.97
SF3B3-209ENST00000567635 ARFGEF2Q9Y6D5 1785 aa9□□□□□ -0.97
SF3B3-209ENST00000567635 HOXB7P09629 217 aa9□□□□□ -0.97
SF3B3-209ENST00000567635 ZNF853P0CG23 659 aa9□□□□□ -0.97
SF3B3-209ENST00000567635 GPTP24298 496 aa9□□□□□ -0.97
SF3B3-209ENST00000567635 RASSF7Q02833 373 aa9□□□□□ -0.97
SF3B3-209ENST00000567635 AIMP1Q12904 312 aaKnown RBP9□□□□□ -0.97
SF3B3-209ENST00000567635 KRT24Q2M2I5 525 aa9□□□□□ -0.97
SF3B3-209ENST00000567635 PROSER3Q2NL68 480 aa9□□□□□ -0.97
SF3B3-209ENST00000567635 LRP10Q7Z4F1 713 aa9□□□□□ -0.97
SF3B3-209ENST00000567635 ZNF34Q8IZ26 560 aa9□□□□□ -0.97
SF3B3-209ENST00000567635 DDX21Q9NR30 783 aaKnown RBP eCLIP9□□□□□ -0.97
SF3B3-209ENST00000567635 KIF3CO14782 793 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 ANXA1P04083 346 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 ALDH1B1P30837 517 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 GNAI1P63096 354 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 ERFEQ4G0M1 354 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 SOGA3Q5TF21 947 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 SUSD4Q5VX71 490 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 DUSP27Q5VZP5 1158 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 PRPF40BQ6NWY9 871 aaKnown RBP8.99□□□□□ -0.97
SF3B3-209ENST00000567635 COPS6Q7L5N1 327 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 PPP1R42Q7Z4L9 355 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 NUTM1Q86Y26 1132 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 XAGE3Q8WTP9 111 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 MBIPQ9NS73 344 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 IFT57Q9NWB7 429 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 KDM2BQ8NHM5 1336 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 CACNA1FO60840 1977 aa8.99□□□□□ -0.97
SF3B3-209ENST00000567635 NFKBIEO00221 500 aa8.98□□□□□ -0.97
SF3B3-209ENST00000567635 PRELPP51888 382 aa8.98□□□□□ -0.97
SF3B3-209ENST00000567635 PARP10Q53GL7 1025 aa8.98□□□□□ -0.97
SF3B3-209ENST00000567635 HDGFL1Q5TGJ6 251 aa8.98□□□□□ -0.97
SF3B3-209ENST00000567635 C7orf43Q8WVR3 580 aa8.98□□□□□ -0.97
SF3B3-209ENST00000567635 MRS2Q9HD23 443 aa8.98□□□□□ -0.97
SF3B3-209ENST00000567635 NMRK2Q9NPI5 230 aa8.98□□□□□ -0.97
SF3B3-209ENST00000567635 FOXD4L1Q9NU39 408 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms