RNA–Protein interactions for RNA: ENST00000567470.1

RBFOX1-217, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-217ENST00000567470 PDZRN3Q9UPQ7 1066 aa23.8■■□□□ 1.4
RBFOX1-217ENST00000567470 NEUROD2Q15784 382 aa23.79■■□□□ 1.4
RBFOX1-217ENST00000567470 NGEFQ8N5V2 710 aa23.79■■□□□ 1.4
RBFOX1-217ENST00000567470 ZNF622Q969S3 477 aaKnown RBP eCLIP23.79■■□□□ 1.4
RBFOX1-217ENST00000567470 RNF181Q9P0P0 153 aa23.79■■□□□ 1.4
RBFOX1-217ENST00000567470 RGL2O15211 777 aa23.78■■□□□ 1.4
RBFOX1-217ENST00000567470 RUNDC1Q96C34 613 aa23.78■■□□□ 1.4
RBFOX1-217ENST00000567470 NIP7Q9Y221 180 aaKnown RBP eCLIP23.78■■□□□ 1.4
RBFOX1-217ENST00000567470 RASSF7Q02833 373 aa23.77■■□□□ 1.4
RBFOX1-217ENST00000567470 ADAMTS8Q9UP79 889 aa23.77■■□□□ 1.4
RBFOX1-217ENST00000567470 MYL6BP14649 208 aa23.76■■□□□ 1.39
RBFOX1-217ENST00000567470 ZEB1P37275 1124 aaPredicted RBP23.76■■□□□ 1.39
RBFOX1-217ENST00000567470 HLFQ16534 295 aa23.75■■□□□ 1.39
RBFOX1-217ENST00000567470 KIF6Q6ZMV9 814 aa23.75■■□□□ 1.39
RBFOX1-217ENST00000567470 BABAM1Q9NWV8 329 aa23.75■■□□□ 1.39
RBFOX1-217ENST00000567470 FAM177BA6PVY3 158 aa23.74■■□□□ 1.39
RBFOX1-217ENST00000567470 SBF1O95248 1867 aa23.74■■□□□ 1.39
RBFOX1-217ENST00000567470 KIF3CO14782 793 aa23.73■■□□□ 1.39
RBFOX1-217ENST00000567470 ERBB4Q15303 1308 aa23.73■■□□□ 1.39
RBFOX1-217ENST00000567470 MAP3K15Q6ZN16 1313 aa23.73■■□□□ 1.39
RBFOX1-217ENST00000567470 TPTE2Q6XPS3 522 aa23.72■■□□□ 1.39
RBFOX1-217ENST00000567470 TTLL7Q6ZT98 887 aa23.72■■□□□ 1.39
RBFOX1-217ENST00000567470 ZNF219Q9P2Y4 722 aaPredicted RBP23.72■■□□□ 1.39
RBFOX1-217ENST00000567470 CACNA1SQ13698 1873 aa23.72■■□□□ 1.39
RBFOX1-217ENST00000567470 ERVV-1B6SEH8 477 aa23.71■■□□□ 1.39
RBFOX1-217ENST00000567470 SRGNP10124 158 aa23.71■■□□□ 1.39
RBFOX1-217ENST00000567470 EIF2S2P20042 333 aaKnown RBP23.71■■□□□ 1.39
RBFOX1-217ENST00000567470 LMNB1P20700 586 aa23.71■■□□□ 1.39
RBFOX1-217ENST00000567470 STYK1Q6J9G0 422 aa23.71■■□□□ 1.39
RBFOX1-217ENST00000567470 CNKSR1Q969H4 720 aa23.71■■□□□ 1.39
RBFOX1-217ENST00000567470 NMRK2Q9NPI5 230 aa23.71■■□□□ 1.39
RBFOX1-217ENST00000567470 TRIM35Q9UPQ4 493 aa23.71■■□□□ 1.39
RBFOX1-217ENST00000567470 CEP350Q5VT06 3117 aa23.71■■□□□ 1.39
RBFOX1-217ENST00000567470 NUP98P52948 1817 aa23.7■■□□□ 1.39
RBFOX1-217ENST00000567470 C21orf2O43822 256 aa23.7■■□□□ 1.38
RBFOX1-217ENST00000567470 MASTLQ96GX5 879 aa23.7■■□□□ 1.38
RBFOX1-217ENST00000567470 ZBTB3Q9H5J0 574 aa23.7■■□□□ 1.38
RBFOX1-217ENST00000567470 LAS1LQ9Y4W2 734 aaKnown RBP23.7■■□□□ 1.38
RBFOX1-217ENST00000567470 ARFGEF2Q9Y6D5 1785 aa23.7■■□□□ 1.38
RBFOX1-217ENST00000567470 NFKBIEO00221 500 aa23.69■■□□□ 1.38
RBFOX1-217ENST00000567470 PRPF40BQ6NWY9 871 aaKnown RBP23.69■■□□□ 1.38
RBFOX1-217ENST00000567470 TIAM2Q8IVF5 1701 aa23.69■■□□□ 1.38
RBFOX1-217ENST00000567470 KDM2BQ8NHM5 1336 aa23.68■■□□□ 1.38
RBFOX1-217ENST00000567470 GTF2E1P29083 439 aaPredicted RBP23.68■■□□□ 1.38
RBFOX1-217ENST00000567470 SLX4Q8IY92 1834 aa23.68■■□□□ 1.38
RBFOX1-217ENST00000567470 ZC3H4Q9UPT8 1303 aaKnown RBP23.67■■□□□ 1.38
RBFOX1-217ENST00000567470 PRELPP51888 382 aa23.67■■□□□ 1.38
RBFOX1-217ENST00000567470 TNRC6CQ9HCJ0 1690 aaKnown RBP23.67■■□□□ 1.38
RBFOX1-217ENST00000567470 CHL1O00533 1208 aa23.66■■□□□ 1.38
RBFOX1-217ENST00000567470 GPTP24298 496 aa23.66■■□□□ 1.38
RBFOX1-217ENST00000567470 NECTIN2Q92692 538 aa23.66■■□□□ 1.38
RBFOX1-217ENST00000567470 NYXQ9GZU5 481 aa23.66■■□□□ 1.38
RBFOX1-217ENST00000567470 FER1L6Q2WGJ9 1857 aa23.66■■□□□ 1.38
RBFOX1-217ENST00000567470 ABCC12Q96J65 1359 aa23.65■■□□□ 1.38
RBFOX1-217ENST00000567470 ANXA1P04083 346 aa23.65■■□□□ 1.38
RBFOX1-217ENST00000567470 NPR1P16066 1061 aa23.65■■□□□ 1.38
RBFOX1-217ENST00000567470 KRT24Q2M2I5 525 aa23.65■■□□□ 1.38
RBFOX1-217ENST00000567470 PROSER3Q2NL68 480 aa23.65■■□□□ 1.38
RBFOX1-217ENST00000567470 UBN2Q6ZU65 1347 aa23.64■■□□□ 1.38
RBFOX1-217ENST00000567470 PDIA6Q15084 440 aa23.64■■□□□ 1.37
RBFOX1-217ENST00000567470 LRP10Q7Z4F1 713 aa23.64■■□□□ 1.37
RBFOX1-217ENST00000567470 NUTM1Q86Y26 1132 aa23.64■■□□□ 1.37
RBFOX1-217ENST00000567470 CCDC88AQ3V6T2 1871 aa23.64■■□□□ 1.37
RBFOX1-217ENST00000567470 IBTKQ9P2D0 1353 aaPredicted RBP23.64■■□□□ 1.37
RBFOX1-217ENST00000567470 KLRG2A4D1S0 409 aaPredicted RBP23.63■■□□□ 1.37
RBFOX1-217ENST00000567470 SOGA3Q5TF21 947 aa23.63■■□□□ 1.37
RBFOX1-217ENST00000567470 TAOK3Q9H2K8 898 aa23.63■■□□□ 1.37
RBFOX1-217ENST00000567470 APAF1O14727 1248 aa23.62■■□□□ 1.37
RBFOX1-217ENST00000567470 TOMM70O94826 608 aa23.62■■□□□ 1.37
RBFOX1-217ENST00000567470 GIGYF2Q6Y7W6 1299 aaKnown RBP23.62■■□□□ 1.37
RBFOX1-217ENST00000567470 C16orf71Q8IYS4 520 aaPredicted RBP23.62■■□□□ 1.37
RBFOX1-217ENST00000567470 HSPA6P17066 643 aa23.61■■□□□ 1.37
RBFOX1-217ENST00000567470 ERFEQ4G0M1 354 aa23.61■■□□□ 1.37
RBFOX1-217ENST00000567470 LTBP3Q9NS15 1303 aa23.6■■□□□ 1.37
RBFOX1-217ENST00000567470 SUSD4Q5VX71 490 aa23.6■■□□□ 1.37
RBFOX1-217ENST00000567470 ZNF34Q8IZ26 560 aa23.6■■□□□ 1.37
RBFOX1-217ENST00000567470 CFAP44Q96MT7 982 aa23.6■■□□□ 1.37
RBFOX1-217ENST00000567470 RIC1Q4ADV7 1423 aa23.59■■□□□ 1.37
RBFOX1-217ENST00000567470 AIMP1Q12904 312 aaKnown RBP23.59■■□□□ 1.37
RBFOX1-217ENST00000567470 CCDC93Q567U6 631 aa23.59■■□□□ 1.37
RBFOX1-217ENST00000567470 HDGFL1Q5TGJ6 251 aa23.59■■□□□ 1.37
RBFOX1-217ENST00000567470 XAGE3Q8WTP9 111 aa23.59■■□□□ 1.37
RBFOX1-217ENST00000567470 RRAGCQ9HB90 399 aa23.59■■□□□ 1.37
RBFOX1-217ENST00000567470 NTSR2O95665 410 aa23.58■■□□□ 1.37
RBFOX1-217ENST00000567470 COPS6Q7L5N1 327 aa23.58■■□□□ 1.37
RBFOX1-217ENST00000567470 DDX21Q9NR30 783 aaKnown RBP eCLIP23.58■■□□□ 1.37
RBFOX1-217ENST00000567470 CHPF2Q9P2E5 772 aa23.58■■□□□ 1.37
RBFOX1-217ENST00000567470 ANKRD36CQ5JPF3 1778 aa23.57■■□□□ 1.36
RBFOX1-217ENST00000567470 DICER1Q9UPY3 1922 aaKnown RBP23.57■■□□□ 1.36
RBFOX1-217ENST00000567470 GLTPD2A6NH11 291 aa23.57■■□□□ 1.36
RBFOX1-217ENST00000567470 HOXB7P09629 217 aa23.57■■□□□ 1.36
RBFOX1-217ENST00000567470 CRY2Q49AN0 593 aa23.57■■□□□ 1.36
RBFOX1-217ENST00000567470 PARP10Q53GL7 1025 aa23.57■■□□□ 1.36
RBFOX1-217ENST00000567470 PPP1R42Q7Z4L9 355 aa23.57■■□□□ 1.36
RBFOX1-217ENST00000567470 C7orf43Q8WVR3 580 aa23.57■■□□□ 1.36
RBFOX1-217ENST00000567470 MBIPQ9NS73 344 aa23.57■■□□□ 1.36
RBFOX1-217ENST00000567470 ZNF316A6NFI3 1004 aaPredicted RBP23.56■■□□□ 1.36
RBFOX1-217ENST00000567470 ALDH1B1P30837 517 aa23.56■■□□□ 1.36
RBFOX1-217ENST00000567470 CALD1Q05682 793 aaKnown RBP23.56■■□□□ 1.36
RBFOX1-217ENST00000567470 CCDC184Q52MB2 194 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms