RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 ERVV-1B6SEH8 477 aa16.08■□□□□ 0.16
RNF40-211ENST00000567365 ELL2O00472 640 aaPredicted RBP16.08■□□□□ 0.16
RNF40-211ENST00000567365 MYL6BP14649 208 aa16.08■□□□□ 0.16
RNF40-211ENST00000567365 TRMT2AQ8IZ69 625 aaKnown RBP16.08■□□□□ 0.16
RNF40-211ENST00000567365 NECTIN2Q92692 538 aa16.08■□□□□ 0.16
RNF40-211ENST00000567365 ZNF330Q9Y3S2 320 aaPredicted RBP16.08■□□□□ 0.16
RNF40-211ENST00000567365 GOLGA2Q08379 1002 aa16.07■□□□□ 0.16
RNF40-211ENST00000567365 SLFN5Q08AF3 891 aa16.07■□□□□ 0.16
RNF40-211ENST00000567365 HLFQ16534 295 aa16.07■□□□□ 0.16
RNF40-211ENST00000567365 TBC1D9BQ66K14 1250 aa16.07■□□□□ 0.16
RNF40-211ENST00000567365 DBF4Q9UBU7 674 aaPredicted RBP16.07■□□□□ 0.16
RNF40-211ENST00000567365 CD2APQ9Y5K6 639 aa16.07■□□□□ 0.16
RNF40-211ENST00000567365 MAP3K15Q6ZN16 1313 aa16.07■□□□□ 0.16
RNF40-211ENST00000567365 ATP10DQ9P241 1426 aa16.06■□□□□ 0.16
RNF40-211ENST00000567365 VAMP4O75379 141 aa16.06■□□□□ 0.16
RNF40-211ENST00000567365 EXOSC9Q06265 439 aaKnown RBP16.06■□□□□ 0.16
RNF40-211ENST00000567365 TWISTNBQ3B726 338 aaPredicted RBP16.06■□□□□ 0.16
RNF40-211ENST00000567365 MYH16Q9H6N6 1097 aa16.06■□□□□ 0.16
RNF40-211ENST00000567365 COPS6Q7L5N1 327 aa16.05■□□□□ 0.16
RNF40-211ENST00000567365 NPM2Q86SE8 214 aaKnown RBP16.05■□□□□ 0.16
RNF40-211ENST00000567365 CDCA7LQ96GN5 454 aa16.05■□□□□ 0.16
RNF40-211ENST00000567365 CACNA1FO60840 1977 aa16.04■□□□□ 0.16
RNF40-211ENST00000567365 E9PSI1 815 aa16.04■□□□□ 0.16
RNF40-211ENST00000567365 NLGN2Q8NFZ4 835 aa16.04■□□□□ 0.16
RNF40-211ENST00000567365 XAGE3Q8WTP9 111 aa16.04■□□□□ 0.16
RNF40-211ENST00000567365 PARP3Q9Y6F1 533 aa16.04■□□□□ 0.16
RNF40-211ENST00000567365 ANKRD36CQ5JPF3 1778 aa16.04■□□□□ 0.16
RNF40-211ENST00000567365 CARMIL3Q8ND23 1372 aa16.03■□□□□ 0.16
RNF40-211ENST00000567365 SERPINB2P05120 415 aa16.03■□□□□ 0.16
RNF40-211ENST00000567365 CCDC30Q5VVM6 783 aa16.03■□□□□ 0.16
RNF40-211ENST00000567365 HYPKQ9NX55 129 aa16.03■□□□□ 0.16
RNF40-211ENST00000567365 ZNF652Q9Y2D9 606 aa16.03■□□□□ 0.16
RNF40-211ENST00000567365 ANKRD31Q8N7Z5 1873 aa16.03■□□□□ 0.16
RNF40-211ENST00000567365 PXDNLA1KZ92 1463 aa16.03■□□□□ 0.16
RNF40-211ENST00000567365 BRCA1P38398 1863 aaKnown RBP16.02■□□□□ 0.16
RNF40-211ENST00000567365 GIGYF2Q6Y7W6 1299 aaKnown RBP16.02■□□□□ 0.16
RNF40-211ENST00000567365 KIF6Q6ZMV9 814 aa16.02■□□□□ 0.16
RNF40-211ENST00000567365 ZNF34Q8IZ26 560 aa16.02■□□□□ 0.16
RNF40-211ENST00000567365 CHMP4AQ9BY43 222 aa16.02■□□□□ 0.16
RNF40-211ENST00000567365 ARFGEF2Q9Y6D5 1785 aa16.02■□□□□ 0.15
RNF40-211ENST00000567365 GPR162Q16538 588 aa16.01■□□□□ 0.15
RNF40-211ENST00000567365 KLHL34Q8N239 644 aa16.01■□□□□ 0.15
RNF40-211ENST00000567365 SETDB2Q96T68 719 aa16.01■□□□□ 0.15
RNF40-211ENST00000567365 ZBTB3Q9H5J0 574 aa16.01■□□□□ 0.15
RNF40-211ENST00000567365 PHAXQ9H814 394 aaKnown RBP16.01■□□□□ 0.15
RNF40-211ENST00000567365 UBN2Q6ZU65 1347 aa16■□□□□ 0.15
RNF40-211ENST00000567365 C1QTNF8P60827 252 aa16■□□□□ 0.15
RNF40-211ENST00000567365 PRR5LQ6MZQ0 368 aa16■□□□□ 0.15
RNF40-211ENST00000567365 BICDL1Q6ZP65 573 aa16■□□□□ 0.15
RNF40-211ENST00000567365 PLBD2Q8NHP8 589 aa16■□□□□ 0.15
RNF40-211ENST00000567365 N4BP2Q86UW6 1770 aaPredicted RBP16■□□□□ 0.15
RNF40-211ENST00000567365 IBTKQ9P2D0 1353 aaPredicted RBP16■□□□□ 0.15
RNF40-211ENST00000567365 KCNA3P22001 575 aa15.99■□□□□ 0.15
RNF40-211ENST00000567365 TGFB2P61812 414 aa15.99■□□□□ 0.15
RNF40-211ENST00000567365 AIMP1Q12904 312 aaKnown RBP15.99■□□□□ 0.15
RNF40-211ENST00000567365 ANKRD13DQ6ZTN6 518 aa15.99■□□□□ 0.15
RNF40-211ENST00000567365 NIP7Q9Y221 180 aaKnown RBP eCLIP15.99■□□□□ 0.15
RNF40-211ENST00000567365 DLEC1Q9Y238 1755 aa15.98■□□□□ 0.15
RNF40-211ENST00000567365 HNRNPUQ00839 825 aaKnown RBP eCLIP15.98■□□□□ 0.15
RNF40-211ENST00000567365 G2E3Q7L622 706 aa15.98■□□□□ 0.15
RNF40-211ENST00000567365 TCERG1O14776 1098 aaKnown RBP15.97■□□□□ 0.15
RNF40-211ENST00000567365 TCIRG1Q13488 830 aa15.97■□□□□ 0.15
RNF40-211ENST00000567365 PELP1Q8IZL8 1130 aaKnown RBP15.97■□□□□ 0.15
RNF40-211ENST00000567365 ISCA1Q9BUE6 129 aa15.97■□□□□ 0.15
RNF40-211ENST00000567365 COL11A2P13942 1736 aaPredicted RBP15.97■□□□□ 0.15
RNF40-211ENST00000567365 ZBED9Q6R2W3 1325 aa15.96■□□□□ 0.15
RNF40-211ENST00000567365 RIC1Q4ADV7 1423 aa15.96■□□□□ 0.15
RNF40-211ENST00000567365 SLC4A2P04920 1241 aa15.96■□□□□ 0.15
RNF40-211ENST00000567365 YBX3P16989 372 aaKnown RBP eCLIP15.96■□□□□ 0.15
RNF40-211ENST00000567365 TRIM28Q13263 835 aaKnown RBP15.96■□□□□ 0.15
RNF40-211ENST00000567365 HSP90AB3PQ58FF7 597 aa15.96■□□□□ 0.15
RNF40-211ENST00000567365 ADCY9O60503 1353 aa15.96■□□□□ 0.15
RNF40-211ENST00000567365 KLRG2A4D1S0 409 aaPredicted RBP15.95■□□□□ 0.14
RNF40-211ENST00000567365 NTSR2O95665 410 aa15.95■□□□□ 0.14
RNF40-211ENST00000567365 DPEP1P16444 411 aa15.95■□□□□ 0.14
RNF40-211ENST00000567365 GPTP24298 496 aa15.95■□□□□ 0.14
RNF40-211ENST00000567365 SUSD4Q5VX71 490 aa15.95■□□□□ 0.14
RNF40-211ENST00000567365 NLRP10Q86W26 655 aa15.95■□□□□ 0.14
RNF40-211ENST00000567365 CNBD1Q8NA66 436 aa15.95■□□□□ 0.14
RNF40-211ENST00000567365 BRIP1Q9BX63 1249 aa15.95■□□□□ 0.14
RNF40-211ENST00000567365 STK31Q9BXU1 1019 aa15.95■□□□□ 0.14
RNF40-211ENST00000567365 TNRC6CQ9HCJ0 1690 aaKnown RBP15.95■□□□□ 0.14
RNF40-211ENST00000567365 PARP10Q53GL7 1025 aa15.94■□□□□ 0.14
RNF40-211ENST00000567365 NBPF5PQ86XG9 351 aaPredicted RBP15.94■□□□□ 0.14
RNF40-211ENST00000567365 ZNF428Q96B54 188 aa15.94■□□□□ 0.14
RNF40-211ENST00000567365 ABCC12Q96J65 1359 aa15.94■□□□□ 0.14
RNF40-211ENST00000567365 CHD4Q14839 1912 aa15.94■□□□□ 0.14
RNF40-211ENST00000567365 A0A0G2JLW4 131 aa15.93■□□□□ 0.14
RNF40-211ENST00000567365 CT47B1P0C2W7 299 aaPredicted RBP15.93■□□□□ 0.14
RNF40-211ENST00000567365 CHRNA5P30532 468 aa15.93■□□□□ 0.14
RNF40-211ENST00000567365 FLIIQ13045 1269 aa15.93■□□□□ 0.14
RNF40-211ENST00000567365 KSR2Q6VAB6 950 aa15.93■□□□□ 0.14
RNF40-211ENST00000567365 TPTE2Q6XPS3 522 aa15.93■□□□□ 0.14
RNF40-211ENST00000567365 CCDC24Q8N4L8 307 aa15.93■□□□□ 0.14
RNF40-211ENST00000567365 PI4KAP2A4QPH2 592 aa15.92■□□□□ 0.14
RNF40-211ENST00000567365 SLC10A5Q5PT55 438 aa15.92■□□□□ 0.14
RNF40-211ENST00000567365 PI4KAP1Q8N8J0 262 aa15.92■□□□□ 0.14
RNF40-211ENST00000567365 METTL22Q9BUU2 404 aaPredicted RBP15.92■□□□□ 0.14
RNF40-211ENST00000567365 NYXQ9GZU5 481 aa15.92■□□□□ 0.14
RNF40-211ENST00000567365 RNF123Q5XPI4 1314 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms