RNA–Protein interactions for RNA: ENST00000567173.5

STUB1-209, Transcript of STIP1 homology and U-box containing protein 1, human

TSL 3

Gene STUB1, Length 743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STUB1-209	ENST00000567173	MAP3K15	Q6ZN16	1313 aa		33.22	■■■□□ 2.91
STUB1-209	ENST00000567173	CARMIL3	Q8ND23	1372 aa		33.21	■■■□□ 2.91
STUB1-209	ENST00000567173	TTLL7	Q6ZT98	887 aa		33.21	■■■□□ 2.91
STUB1-209	ENST00000567173	C8orf58	Q8NAV2	365 aa		33.21	■■■□□ 2.91
STUB1-209	ENST00000567173	PXDNL	A1KZ92	1463 aa		33.2	■■■□□ 2.91
STUB1-209	ENST00000567173	KIF6	Q6ZMV9	814 aa		33.2	■■■□□ 2.91
STUB1-209	ENST00000567173	BICDL1	Q6ZP65	573 aa		33.2	■■■□□ 2.91
STUB1-209	ENST00000567173	NECTIN2	Q92692	538 aa		33.2	■■■□□ 2.91
STUB1-209	ENST00000567173	TSR2	Q969E8	191 aa	Known RBP	33.2	■■■□□ 2.91
STUB1-209	ENST00000567173	SETDB2	Q96T68	719 aa		33.2	■■■□□ 2.91
STUB1-209	ENST00000567173	ZNF521	Q96K83	1311 aa		33.2	■■■□□ 2.91
STUB1-209	ENST00000567173	DBF4	Q9UBU7	674 aa	Predicted RBP	33.19	■■■□□ 2.9
STUB1-209	ENST00000567173	N4BP2	Q86UW6	1770 aa	Predicted RBP	33.19	■■■□□ 2.9
STUB1-209	ENST00000567173	HLF	Q16534	295 aa		33.18	■■■□□ 2.9
STUB1-209	ENST00000567173	CHMP4A	Q9BY43	222 aa		33.18	■■■□□ 2.9
STUB1-209	ENST00000567173	ANXA1	P04083	346 aa		33.17	■■■□□ 2.9
STUB1-209	ENST00000567173	CHPF2	Q9P2E5	772 aa		33.17	■■■□□ 2.9
STUB1-209	ENST00000567173	BRCA1	P38398	1863 aa	Known RBP	33.16	■■■□□ 2.9
STUB1-209	ENST00000567173	FANCI	Q9NVI1	1328 aa		33.15	■■■□□ 2.9
STUB1-209	ENST00000567173	ATP10D	Q9P241	1426 aa		33.15	■■■□□ 2.9
STUB1-209	ENST00000567173	ELL2	O00472	640 aa	Predicted RBP	33.14	■■■□□ 2.9
STUB1-209	ENST00000567173	COPS6	Q7L5N1	327 aa		33.13	■■■□□ 2.89
STUB1-209	ENST00000567173	TSPYL6	Q8N831	410 aa		33.13	■■■□□ 2.89
STUB1-209	ENST00000567173	UTRN	P46939	3433 aa		33.12	■■■□□ 2.89
STUB1-209	ENST00000567173	ANKRD31	Q8N7Z5	1873 aa		33.12	■■■□□ 2.89
STUB1-209	ENST00000567173	GPR162	Q16538	588 aa		33.12	■■■□□ 2.89
STUB1-209	ENST00000567173	GIGYF2	Q6Y7W6	1299 aa	Known RBP	33.12	■■■□□ 2.89
STUB1-209	ENST00000567173	XAGE3	Q8WTP9	111 aa		33.12	■■■□□ 2.89
STUB1-209	ENST00000567173	HYPK	Q9NX55	129 aa		33.12	■■■□□ 2.89
STUB1-209	ENST00000567173	NIP7	Q9Y221	180 aa	Known RBP eCLIP	33.12	■■■□□ 2.89
STUB1-209	ENST00000567173	PRR5L	Q6MZQ0	368 aa		33.11	■■■□□ 2.89
STUB1-209	ENST00000567173	ZBTB3	Q9H5J0	574 aa		33.11	■■■□□ 2.89
STUB1-209	ENST00000567173	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.11	■■■□□ 2.89
STUB1-209	ENST00000567173		A0A0G2JLW4	131 aa		33.1	■■■□□ 2.89
STUB1-209	ENST00000567173	DPEP1	P16444	411 aa		33.1	■■■□□ 2.89
STUB1-209	ENST00000567173	KCNA3	P22001	575 aa		33.1	■■■□□ 2.89
STUB1-209	ENST00000567173	YBX3	P16989	372 aa	Known RBP eCLIP	33.09	■■■□□ 2.89	6e-9	■■■□□ 15.7
STUB1-209	ENST00000567173	GOLGA2	Q08379	1002 aa		33.09	■■■□□ 2.89
STUB1-209	ENST00000567173	CCDC30	Q5VVM6	783 aa		33.09	■■■□□ 2.89
STUB1-209	ENST00000567173	MYH16	Q9H6N6	1097 aa		33.09	■■■□□ 2.89
STUB1-209	ENST00000567173	CACNA1F	O60840	1977 aa		33.09	■■■□□ 2.89
STUB1-209	ENST00000567173	ANKRD36C	Q5JPF3	1778 aa		33.09	■■■□□ 2.89
STUB1-209	ENST00000567173	TWISTNB	Q3B726	338 aa	Predicted RBP	33.08	■■■□□ 2.89
STUB1-209	ENST00000567173	CNBD1	Q8NA66	436 aa		33.08	■■■□□ 2.89
STUB1-209	ENST00000567173	DLEC1	Q9Y238	1755 aa		33.08	■■■□□ 2.89
STUB1-209	ENST00000567173	CHD4	Q14839	1912 aa		33.07	■■■□□ 2.88
STUB1-209	ENST00000567173	NBPF5P	Q86XG9	351 aa	Predicted RBP	33.07	■■■□□ 2.88
STUB1-209	ENST00000567173	ZNF34	Q8IZ26	560 aa		33.07	■■■□□ 2.88
STUB1-209	ENST00000567173	BRIP1	Q9BX63	1249 aa		33.07	■■■□□ 2.88
STUB1-209	ENST00000567173	AIMP1	Q12904	312 aa	Known RBP	33.06	■■■□□ 2.88
STUB1-209	ENST00000567173	GRIN3B	O60391	1043 aa		33.05	■■■□□ 2.88
STUB1-209	ENST00000567173	TPTE2	Q6XPS3	522 aa		33.05	■■■□□ 2.88
STUB1-209	ENST00000567173	PDZRN3	Q9UPQ7	1066 aa		33.05	■■■□□ 2.88
STUB1-209	ENST00000567173	IBTK	Q9P2D0	1353 aa	Predicted RBP	33.05	■■■□□ 2.88
STUB1-209	ENST00000567173	PELP1	Q8IZL8	1130 aa	Known RBP	33.04	■■■□□ 2.88
STUB1-209	ENST00000567173	ST5	P78524	1137 aa		33.03	■■■□□ 2.88
STUB1-209	ENST00000567173	HSP90AB3P	Q58FF7	597 aa		33.03	■■■□□ 2.88
STUB1-209	ENST00000567173	PLBD2	Q8NHP8	589 aa		33.03	■■■□□ 2.88
STUB1-209	ENST00000567173	UBN2	Q6ZU65	1347 aa		33.02	■■■□□ 2.88
STUB1-209	ENST00000567173	ARFGEF1	Q9Y6D6	1849 aa		33.02	■■■□□ 2.88
STUB1-209	ENST00000567173	CHRNA5	P30532	468 aa		33.02	■■■□□ 2.88
STUB1-209	ENST00000567173	EXOSC9	Q06265	439 aa	Known RBP	33.02	■■■□□ 2.88
STUB1-209	ENST00000567173	ANKRD13D	Q6ZTN6	518 aa		33.02	■■■□□ 2.88
STUB1-209	ENST00000567173	PDE6B	P35913	854 aa		33.01	■■■□□ 2.87
STUB1-209	ENST00000567173	NYX	Q9GZU5	481 aa		33.01	■■■□□ 2.87
STUB1-209	ENST00000567173	PIM2	Q9P1W9	311 aa		33.01	■■■□□ 2.87
STUB1-209	ENST00000567173	NPHP1	O15259	732 aa		33	■■■□□ 2.87
STUB1-209	ENST00000567173	VAMP4	O75379	141 aa		33	■■■□□ 2.87
STUB1-209	ENST00000567173	PARP10	Q53GL7	1025 aa		33	■■■□□ 2.87
STUB1-209	ENST00000567173	ARFGEF2	Q9Y6D5	1785 aa		33	■■■□□ 2.87
STUB1-209	ENST00000567173	GPT	P24298	496 aa		32.99	■■■□□ 2.87
STUB1-209	ENST00000567173	TCIRG1	Q13488	830 aa		32.99	■■■□□ 2.87
STUB1-209	ENST00000567173		E9PSI1	815 aa		32.98	■■■□□ 2.87
STUB1-209	ENST00000567173		H0YIN7	160 aa		32.98	■■■□□ 2.87
STUB1-209	ENST00000567173	COL11A2	P13942	1736 aa	Predicted RBP	32.98	■■■□□ 2.87
STUB1-209	ENST00000567173	C2CD5	Q86YS7	1000 aa		32.98	■■■□□ 2.87
STUB1-209	ENST00000567173	CCDC24	Q8N4L8	307 aa		32.98	■■■□□ 2.87
STUB1-209	ENST00000567173	STK31	Q9BXU1	1019 aa		32.98	■■■□□ 2.87
STUB1-209	ENST00000567173	PHAX	Q9H814	394 aa	Known RBP	32.98	■■■□□ 2.87
STUB1-209	ENST00000567173	KLRG2	A4D1S0	409 aa	Predicted RBP	32.96	■■■□□ 2.87
STUB1-209	ENST00000567173	SUSD4	Q5VX71	490 aa		32.96	■■■□□ 2.87
STUB1-209	ENST00000567173	WWC3	Q9ULE0	1092 aa		32.96	■■■□□ 2.87
STUB1-209	ENST00000567173	RIC1	Q4ADV7	1423 aa		32.95	■■■□□ 2.87
STUB1-209	ENST00000567173	SLFN5	Q08AF3	891 aa		32.95	■■■□□ 2.87
STUB1-209	ENST00000567173	DALRD3	Q5D0E6	543 aa	Known RBP	32.95	■■■□□ 2.87
STUB1-209	ENST00000567173	PPP1R42	Q7Z4L9	355 aa		32.95	■■■□□ 2.87
STUB1-209	ENST00000567173	BCS1L	Q9Y276	419 aa		32.95	■■■□□ 2.87
STUB1-209	ENST00000567173	FAM177B	A6PVY3	158 aa		32.94	■■■□□ 2.86
STUB1-209	ENST00000567173	NTSR2	O95665	410 aa		32.94	■■■□□ 2.86
STUB1-209	ENST00000567173	NLRP10	Q86W26	655 aa		32.93	■■■□□ 2.86
STUB1-209	ENST00000567173	RNF123	Q5XPI4	1314 aa		32.93	■■■□□ 2.86
STUB1-209	ENST00000567173	GTF2E1	P29083	439 aa	Predicted RBP	32.92	■■■□□ 2.86
STUB1-209	ENST00000567173	ISCA1	Q9BUE6	129 aa		32.92	■■■□□ 2.86
STUB1-209	ENST00000567173	DDX58	O95786	925 aa	Known RBP	32.91	■■■□□ 2.86
STUB1-209	ENST00000567173	SRGN	P10124	158 aa		32.91	■■■□□ 2.86
STUB1-209	ENST00000567173	TRIM28	Q13263	835 aa	Known RBP	32.91	■■■□□ 2.86
STUB1-209	ENST00000567173	TRMT2A	Q8IZ69	625 aa	Known RBP	32.91	■■■□□ 2.86
STUB1-209	ENST00000567173	ABCC12	Q96J65	1359 aa		32.91	■■■□□ 2.86
STUB1-209	ENST00000567173	SLC4A2	P04920	1241 aa		32.9	■■■□□ 2.86
STUB1-209	ENST00000567173	ERFE	Q4G0M1	354 aa		32.9	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms