RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 TPTE2Q6XPS3 522 aa36.57■■■■□ 3.44
UBFD1-206ENST00000566669 MASTLQ96GX5 879 aa36.57■■■■□ 3.44
UBFD1-206ENST00000566669 ANKRD31Q8N7Z5 1873 aa36.56■■■■□ 3.44
UBFD1-206ENST00000566669 SRGNP10124 158 aa36.56■■■■□ 3.44
UBFD1-206ENST00000566669 LTBP3Q9NS15 1303 aa36.56■■■■□ 3.44
UBFD1-206ENST00000566669 NBPF26B4DH59 902 aa36.55■■■■□ 3.44
UBFD1-206ENST00000566669 NFKBIEO00221 500 aa36.55■■■■□ 3.44
UBFD1-206ENST00000566669 NBPF10Q6P3W6 841 aaKnown RBP36.55■■■■□ 3.44
UBFD1-206ENST00000566669 NBPF15Q8N660 670 aa36.55■■■■□ 3.44
UBFD1-206ENST00000566669 RRAGCQ9HB90 399 aa36.55■■■■□ 3.44
UBFD1-206ENST00000566669 PIP4K2AP48426 406 aaPredicted RBP36.54■■■■□ 3.44
UBFD1-206ENST00000566669 C21orf2O43822 256 aa36.53■■■■□ 3.44
UBFD1-206ENST00000566669 VEGFAP15692 232 aaPredicted RBP36.52■■■■□ 3.44
UBFD1-206ENST00000566669 DPY19L2Q6NUT2 758 aa36.52■■■■□ 3.44
UBFD1-206ENST00000566669 NIP7Q9Y221 180 aaKnown RBP eCLIP36.52■■■■□ 3.44
UBFD1-206ENST00000566669 CCDC24Q8N4L8 307 aa36.5■■■■□ 3.43
UBFD1-206ENST00000566669 MIS18AQ9NYP9 233 aa36.5■■■■□ 3.43
UBFD1-206ENST00000566669 ERVV-1B6SEH8 477 aa36.49■■■■□ 3.43
UBFD1-206ENST00000566669 PRPF40BQ6NWY9 871 aaKnown RBP36.49■■■■□ 3.43
UBFD1-206ENST00000566669 SMC1BQ8NDV3 1235 aa36.49■■■■□ 3.43
UBFD1-206ENST00000566669 TAOK3Q9H2K8 898 aa36.49■■■■□ 3.43
UBFD1-206ENST00000566669 LAMB4A4D0S4 1761 aa36.48■■■■□ 3.43
UBFD1-206ENST00000566669 KLRG2A4D1S0 409 aaPredicted RBP36.48■■■■□ 3.43
UBFD1-206ENST00000566669 NPR1P16066 1061 aa36.48■■■■□ 3.43
UBFD1-206ENST00000566669 EIF4A1P60842 406 aaKnown RBP36.48■■■■□ 3.43
UBFD1-206ENST00000566669 COL11A2P13942 1736 aaPredicted RBP36.48■■■■□ 3.43
UBFD1-206ENST00000566669 PRELPP51888 382 aa36.47■■■■□ 3.43
UBFD1-206ENST00000566669 ERBB4Q15303 1308 aa36.46■■■■□ 3.43
UBFD1-206ENST00000566669 ERFEQ4G0M1 354 aa36.46■■■■□ 3.43
UBFD1-206ENST00000566669 BABAM1Q9NWV8 329 aa36.46■■■■□ 3.43
UBFD1-206ENST00000566669 DLG5Q8TDM6 1919 aa36.46■■■■□ 3.43
UBFD1-206ENST00000566669 KDM3BQ7LBC6 1761 aa36.45■■■■□ 3.43
UBFD1-206ENST00000566669 LMOD3Q0VAK6 560 aa36.45■■■■□ 3.43
UBFD1-206ENST00000566669 NYXQ9GZU5 481 aa36.45■■■■□ 3.43
UBFD1-206ENST00000566669 KIF6Q6ZMV9 814 aa36.44■■■■□ 3.42
UBFD1-206ENST00000566669 GTF2E1P29083 439 aaPredicted RBP36.43■■■■□ 3.42
UBFD1-206ENST00000566669 FER1L6Q2WGJ9 1857 aa36.42■■■■□ 3.42
UBFD1-206ENST00000566669 ZNF219Q9P2Y4 722 aaPredicted RBP36.42■■■■□ 3.42
UBFD1-206ENST00000566669 TIAM2Q8IVF5 1701 aa36.42■■■■□ 3.42
UBFD1-206ENST00000566669 CCDC93Q567U6 631 aa36.41■■■■□ 3.42
UBFD1-206ENST00000566669 ARFGEF2Q9Y6D5 1785 aa36.4■■■■□ 3.42
UBFD1-206ENST00000566669 MAP3K15Q6ZN16 1313 aa36.4■■■■□ 3.42
UBFD1-206ENST00000566669 ALDH1B1P30837 517 aa36.4■■■■□ 3.42
UBFD1-206ENST00000566669 DNAJC5GQ8N7S2 189 aa36.4■■■■□ 3.42
UBFD1-206ENST00000566669 HLFQ16534 295 aa36.39■■■■□ 3.42
UBFD1-206ENST00000566669 RIPK4P57078 832 aa36.38■■■■□ 3.41
UBFD1-206ENST00000566669 THUMPD2Q9BTF0 503 aaKnown RBP36.38■■■■□ 3.41
UBFD1-206ENST00000566669 TSPYL4Q9UJ04 414 aa36.38■■■■□ 3.41
UBFD1-206ENST00000566669 C7orf43Q8WVR3 580 aa36.37■■■■□ 3.41
UBFD1-206ENST00000566669 RRP7AQ9Y3A4 280 aaKnown RBP36.37■■■■□ 3.41
UBFD1-206ENST00000566669 IBTKQ9P2D0 1353 aaPredicted RBP36.37■■■■□ 3.41
UBFD1-206ENST00000566669 MYBBP1AQ9BQG0 1328 aaKnown RBP36.36■■■■□ 3.41
UBFD1-206ENST00000566669 RTKN2Q8IZC4 609 aa36.36■■■■□ 3.41
UBFD1-206ENST00000566669 SLX4Q8IY92 1834 aa36.36■■■■□ 3.41
UBFD1-206ENST00000566669 CCDC88AQ3V6T2 1871 aa36.35■■■■□ 3.41
UBFD1-206ENST00000566669 DICER1Q9UPY3 1922 aaKnown RBP36.35■■■■□ 3.41
UBFD1-206ENST00000566669 WDR90Q96KV7 1748 aa36.34■■■■□ 3.41
UBFD1-206ENST00000566669 NGEFQ8N5V2 710 aa36.33■■■■□ 3.41
UBFD1-206ENST00000566669 MYL6BP14649 208 aa36.32■■■■□ 3.4
UBFD1-206ENST00000566669 TMPOP42166 694 aaKnown RBP36.32■■■■□ 3.4
UBFD1-206ENST00000566669 RIC1Q4ADV7 1423 aa36.32■■■■□ 3.4
UBFD1-206ENST00000566669 FAM177BA6PVY3 158 aa36.31■■■■□ 3.4
UBFD1-206ENST00000566669 FKBP4Q02790 459 aaKnown RBP eCLIP36.31■■■■□ 3.4
UBFD1-206ENST00000566669 CRY2Q49AN0 593 aa36.31■■■■□ 3.4
UBFD1-206ENST00000566669 CC2D2BQ6DHV5 1058 aa36.3■■■■□ 3.4
UBFD1-206ENST00000566669 DDX10Q13206 875 aaKnown RBP36.29■■■■□ 3.4
UBFD1-206ENST00000566669 GRIPAP1Q4V328 841 aa36.29■■■■□ 3.4
UBFD1-206ENST00000566669 KLRG1Q96E93 195 aa36.29■■■■□ 3.4
UBFD1-206ENST00000566669 IQCA1LA6NCM1 817 aa36.28■■■■□ 3.4
UBFD1-206ENST00000566669 GIGYF2Q6Y7W6 1299 aaKnown RBP36.28■■■■□ 3.4
UBFD1-206ENST00000566669 TTLL7Q6ZT98 887 aa36.28■■■■□ 3.4
UBFD1-206ENST00000566669 PARP10Q53GL7 1025 aa36.27■■■■□ 3.4
UBFD1-206ENST00000566669 IFFO2Q5TF58 517 aa36.27■■■■□ 3.4
UBFD1-206ENST00000566669 POTECB2RU33 542 aa36.26■■■■□ 3.4
UBFD1-206ENST00000566669 PPP1R42Q7Z4L9 355 aa36.26■■■■□ 3.4
UBFD1-206ENST00000566669 ZBTB3Q9H5J0 574 aa36.26■■■■□ 3.4
UBFD1-206ENST00000566669 WDR43Q15061 677 aaKnown RBP eCLIP36.25■■■■□ 3.39
UBFD1-206ENST00000566669 ZNF34Q8IZ26 560 aa36.25■■■■□ 3.39
UBFD1-206ENST00000566669 CACNA1SQ13698 1873 aa36.24■■■■□ 3.39
UBFD1-206ENST00000566669 RPGRQ92834 1020 aaKnown RBP36.24■■■■□ 3.39
UBFD1-206ENST00000566669 NUP98P52948 1817 aa36.24■■■■□ 3.39
UBFD1-206ENST00000566669 HOXA10P31260 410 aaPredicted RBP36.23■■■■□ 3.39
UBFD1-206ENST00000566669 JMYQ8N9B5 988 aa36.23■■■■□ 3.39
UBFD1-206ENST00000566669 RUNDC1Q96C34 613 aa36.23■■■■□ 3.39
UBFD1-206ENST00000566669 NUTM1Q86Y26 1132 aa36.22■■■■□ 3.39
UBFD1-206ENST00000566669 L3MBTL3Q96JM7 780 aaPredicted RBP36.22■■■■□ 3.39
UBFD1-206ENST00000566669 PSMD1Q99460 953 aa36.22■■■■□ 3.39
UBFD1-206ENST00000566669 RNF123Q5XPI4 1314 aa36.22■■■■□ 3.39
UBFD1-206ENST00000566669 GPTP24298 496 aa36.21■■■■□ 3.39
UBFD1-206ENST00000566669 ABCC12Q96J65 1359 aa36.2■■■■□ 3.39
UBFD1-206ENST00000566669 UBN2Q6ZU65 1347 aa36.2■■■■□ 3.39
UBFD1-206ENST00000566669 DDNO94850 711 aaPredicted RBP36.2■■■■□ 3.39
UBFD1-206ENST00000566669 EIF2S2P20042 333 aaKnown RBP36.2■■■■□ 3.39
UBFD1-206ENST00000566669 HSP90AB3PQ58FF7 597 aa36.19■■■■□ 3.38
UBFD1-206ENST00000566669 SUSD4Q5VX71 490 aa36.19■■■■□ 3.38
UBFD1-206ENST00000566669 RBM17Q96I25 401 aaKnown RBP36.19■■■■□ 3.38
UBFD1-206ENST00000566669 PDIA6Q15084 440 aa36.18■■■■□ 3.38
UBFD1-206ENST00000566669 LRP10Q7Z4F1 713 aa36.18■■■■□ 3.38
UBFD1-206ENST00000566669 CRAMP1Q96RY5 1269 aa36.18■■■■□ 3.38
UBFD1-206ENST00000566669 NTSR2O95665 410 aa36.17■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms