RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 IFIT2P09913 472 aaKnown RBP22.76■■□□□ 1.23
MSLN-207ENST00000566549 CWC27Q6UX04 472 aaKnown RBP22.76■■□□□ 1.23
MSLN-207ENST00000566549 LMTK3Q96Q04 1460 aa22.76■■□□□ 1.23
MSLN-207ENST00000566549 AACSQ86V21 672 aa22.76■■□□□ 1.23
MSLN-207ENST00000566549 NEURL1BA8MQ27 555 aa22.75■■□□□ 1.23
MSLN-207ENST00000566549 BAG4O95429 457 aaKnown RBP22.75■■□□□ 1.23
MSLN-207ENST00000566549 TMX3Q96JJ7 454 aa22.75■■□□□ 1.23
MSLN-207ENST00000566549 C5P01031 1676 aa22.75■■□□□ 1.23
MSLN-207ENST00000566549 TOM1L2Q6ZVM7 507 aa22.74■■□□□ 1.23
MSLN-207ENST00000566549 FMNL2Q96PY5 1086 aa22.74■■□□□ 1.23
MSLN-207ENST00000566549 HDAC5Q9UQL6 1122 aa22.74■■□□□ 1.23
MSLN-207ENST00000566549 L1TD1Q5T7N2 865 aaKnown RBP22.74■■□□□ 1.23
MSLN-207ENST00000566549 GLRX3O76003 335 aaKnown RBP22.73■■□□□ 1.23
MSLN-207ENST00000566549 ANKRD13DQ6ZTN6 518 aa22.73■■□□□ 1.23
MSLN-207ENST00000566549 SCN11AQ9UI33 1791 aa22.73■■□□□ 1.23
MSLN-207ENST00000566549 SGSM2O43147 1006 aa22.73■■□□□ 1.23
MSLN-207ENST00000566549 NUCB2P80303 420 aa22.73■■□□□ 1.23
MSLN-207ENST00000566549 G3BP1Q13283 466 aaKnown RBP eCLIP22.73■■□□□ 1.23
MSLN-207ENST00000566549 GCKRQ14397 625 aa22.73■■□□□ 1.23
MSLN-207ENST00000566549 EPHA10Q5JZY3 1008 aa22.73■■□□□ 1.23
MSLN-207ENST00000566549 FOXD4L5Q5VV16 416 aaPredicted RBP22.73■■□□□ 1.23
MSLN-207ENST00000566549 FOXD4L4Q8WXT5 416 aaPredicted RBP22.73■■□□□ 1.23
MSLN-207ENST00000566549 ECHDC1Q9NTX5 307 aa22.73■■□□□ 1.23
MSLN-207ENST00000566549 UTYO14607 1347 aa22.73■■□□□ 1.23
MSLN-207ENST00000566549 TTC41PQ6P2S7 1318 aa22.73■■□□□ 1.23
MSLN-207ENST00000566549 ERC1Q8IUD2 1116 aa22.72■■□□□ 1.23
MSLN-207ENST00000566549 METTL22Q9BUU2 404 aaPredicted RBP22.72■■□□□ 1.23
MSLN-207ENST00000566549 CCDC8Q9H0W5 538 aaPredicted RBP22.72■■□□□ 1.23
MSLN-207ENST00000566549 CPDO75976 1380 aa22.72■■□□□ 1.23
MSLN-207ENST00000566549 SASH1O94885 1247 aa22.72■■□□□ 1.23
MSLN-207ENST00000566549 ANAPC15P60006 121 aa22.72■■□□□ 1.23
MSLN-207ENST00000566549 MCTP1Q6DN14 999 aa22.72■■□□□ 1.23
MSLN-207ENST00000566549 ATP5J2-PTCD1G3V325 749 aa22.71■■□□□ 1.23
MSLN-207ENST00000566549 GOLGA6L22H0YM25 854 aa22.71■■□□□ 1.23
MSLN-207ENST00000566549 PTCD1O75127 700 aaKnown RBP22.71■■□□□ 1.23
MSLN-207ENST00000566549 CWC22Q9HCG8 908 aaKnown RBP22.71■■□□□ 1.23
MSLN-207ENST00000566549 AK9Q5TCS8 1911 aa22.71■■□□□ 1.23
MSLN-207ENST00000566549 LRP10Q7Z4F1 713 aa22.71■■□□□ 1.23
MSLN-207ENST00000566549 USP42Q9H9J4 1324 aaKnown RBP22.71■■□□□ 1.23
MSLN-207ENST00000566549 FSD2A1L4K1 749 aa22.7■■□□□ 1.22
MSLN-207ENST00000566549 CYP2E1P05181 493 aaPredicted RBP22.7■■□□□ 1.22
MSLN-207ENST00000566549 XRCC6P12956 609 aaKnown RBP eCLIP22.7■■□□□ 1.22
MSLN-207ENST00000566549 HSPA4P34932 840 aa22.7■■□□□ 1.22
MSLN-207ENST00000566549 EAF2Q96CJ1 260 aaPredicted RBP22.7■■□□□ 1.22
MSLN-207ENST00000566549 DIAPH3Q9NSV4 1193 aa22.7■■□□□ 1.22
MSLN-207ENST00000566549 TLR7Q9NYK1 1049 aaKnown RBP22.7■■□□□ 1.22
MSLN-207ENST00000566549 ZNF335Q9H4Z2 1342 aaPredicted RBP22.7■■□□□ 1.22
MSLN-207ENST00000566549 CRYBG1Q9Y4K1 1723 aa22.7■■□□□ 1.22
MSLN-207ENST00000566549 GPATCH3Q96I76 525 aa22.7■■□□□ 1.22
MSLN-207ENST00000566549 CHAMP1Q96JM3 812 aa22.7■■□□□ 1.22
MSLN-207ENST00000566549 RAD50Q92878 1312 aa22.7■■□□□ 1.22
MSLN-207ENST00000566549 SLAIN2Q9P270 581 aa22.69■■□□□ 1.22
MSLN-207ENST00000566549 PANK2Q9BZ23 570 aa22.69■■□□□ 1.22
MSLN-207ENST00000566549 LSG1Q9H089 658 aaKnown RBP22.69■■□□□ 1.22
MSLN-207ENST00000566549 STRN4Q9NRL3 753 aa22.69■■□□□ 1.22
MSLN-207ENST00000566549 ZDHHC9Q9Y397 364 aa22.69■■□□□ 1.22
MSLN-207ENST00000566549 WDR17Q8IZU2 1322 aa22.68■■□□□ 1.22
MSLN-207ENST00000566549 KIAA1211Q6ZU35 1233 aa22.68■■□□□ 1.22
MSLN-207ENST00000566549 UBE3BQ7Z3V4 1068 aa22.68■■□□□ 1.22
MSLN-207ENST00000566549 DDX54Q8TDD1 881 aaKnown RBP22.68■■□□□ 1.22
MSLN-207ENST00000566549 SKOR2Q2VWA4 1001 aaPredicted RBP22.67■■□□□ 1.22
MSLN-207ENST00000566549 ZCRB1Q8TBF4 217 aaKnown RBP22.67■■□□□ 1.22
MSLN-207ENST00000566549 MRC1P22897 1456 aa22.67■■□□□ 1.22
MSLN-207ENST00000566549 MCM2P49736 904 aa22.67■■□□□ 1.22
MSLN-207ENST00000566549 CLEC17AQ6ZS10 378 aa22.67■■□□□ 1.22
MSLN-207ENST00000566549 RASEFQ8IZ41 740 aa22.67■■□□□ 1.22
MSLN-207ENST00000566549 DDX49Q9Y6V7 483 aaKnown RBP22.67■■□□□ 1.22
MSLN-207ENST00000566549 SNX14Q9Y5W7 946 aa22.66■■□□□ 1.22
MSLN-207ENST00000566549 PTMSP20962 102 aa22.66■■□□□ 1.22
MSLN-207ENST00000566549 LARP6Q9BRS8 491 aaKnown RBP22.65■■□□□ 1.22
MSLN-207ENST00000566549 PCDH11XQ9BZA7 1347 aa22.65■■□□□ 1.22
MSLN-207ENST00000566549 PCDH11YQ9BZA8 1340 aa22.65■■□□□ 1.22
MSLN-207ENST00000566549 BOLA2Q9H3K6 86 aa22.65■■□□□ 1.22
MSLN-207ENST00000566549 ABCC6O95255 1503 aa22.64■■□□□ 1.21
MSLN-207ENST00000566549 A0A087WZG4 1122 aa22.63■■□□□ 1.21
MSLN-207ENST00000566549 CPA1P15085 419 aa22.63■■□□□ 1.21
MSLN-207ENST00000566549 NCLP19338 710 aaKnown RBP22.63■■□□□ 1.21
MSLN-207ENST00000566549 PTH1RQ03431 593 aa22.63■■□□□ 1.21
MSLN-207ENST00000566549 XIRP1Q702N8 1843 aaKnown RBP22.63■■□□□ 1.21
MSLN-207ENST00000566549 SOS2Q07890 1332 aaPredicted RBP22.63■■□□□ 1.21
MSLN-207ENST00000566549 NBPF26B4DH59 902 aa22.62■■□□□ 1.21
MSLN-207ENST00000566549 CUL4AQ13619 759 aa22.62■■□□□ 1.21
MSLN-207ENST00000566549 NBPF14Q5TI25 921 aa22.62■■□□□ 1.21
MSLN-207ENST00000566549 NBPF10Q6P3W6 841 aaKnown RBP22.62■■□□□ 1.21
MSLN-207ENST00000566549 GAS2L3Q86XJ1 694 aa22.62■■□□□ 1.21
MSLN-207ENST00000566549 NBPF15Q8N660 670 aa22.62■■□□□ 1.21
MSLN-207ENST00000566549 EVI5LQ96CN4 794 aa22.62■■□□□ 1.21
MSLN-207ENST00000566549 PKD1L3Q7Z443 1732 aa22.62■■□□□ 1.21
MSLN-207ENST00000566549 FAM227BQ96M60 508 aa22.62■■□□□ 1.21
MSLN-207ENST00000566549 RUFY2Q8WXA3 655 aa22.61■■□□□ 1.21
MSLN-207ENST00000566549 COL5A2P05997 1499 aaPredicted RBP22.61■■□□□ 1.21
MSLN-207ENST00000566549 A1BGP04217 495 aa22.61■■□□□ 1.21
MSLN-207ENST00000566549 TTLL7Q6ZT98 887 aa22.61■■□□□ 1.21
MSLN-207ENST00000566549 IL17RAQ96F46 866 aa22.61■■□□□ 1.21
MSLN-207ENST00000566549 GRPEL1Q9HAV7 217 aa22.61■■□□□ 1.21
MSLN-207ENST00000566549 EPB41L2O43491 1005 aaKnown RBP22.6■■□□□ 1.21
MSLN-207ENST00000566549 PRPF40AO75400 957 aaKnown RBP22.6■■□□□ 1.21
MSLN-207ENST00000566549 IL2RBP14784 551 aa22.6■■□□□ 1.21
MSLN-207ENST00000566549 PRPF40BQ6NWY9 871 aaKnown RBP22.6■■□□□ 1.21
MSLN-207ENST00000566549 LMBRD1Q9NUN5 540 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms