RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 TGFB2P61812 414 aa16.73■□□□□ 0.27
CNEP1R1-208ENST00000566482 HDGFL1Q5TGJ6 251 aa16.73■□□□□ 0.27
CNEP1R1-208ENST00000566482 DIEXFQ68CQ4 756 aaKnown RBP16.73■□□□□ 0.27
CNEP1R1-208ENST00000566482 SETDB2Q96T68 719 aa16.73■□□□□ 0.27
CNEP1R1-208ENST00000566482 N4BP2Q86UW6 1770 aaPredicted RBP16.73■□□□□ 0.27
CNEP1R1-208ENST00000566482 IL16Q14005 1332 aa16.72■□□□□ 0.27
CNEP1R1-208ENST00000566482 MAP3K15Q6ZN16 1313 aa16.72■□□□□ 0.27
CNEP1R1-208ENST00000566482 A0A0G2JLW4 131 aa16.72■□□□□ 0.27
CNEP1R1-208ENST00000566482 RGL2O15211 777 aa16.72■□□□□ 0.27
CNEP1R1-208ENST00000566482 HLFQ16534 295 aa16.72■□□□□ 0.27
CNEP1R1-208ENST00000566482 KIF6Q6ZMV9 814 aa16.72■□□□□ 0.27
CNEP1R1-208ENST00000566482 TSR2Q969E8 191 aaKnown RBP16.72■□□□□ 0.27
CNEP1R1-208ENST00000566482 WWC3Q9ULE0 1092 aa16.72■□□□□ 0.27
CNEP1R1-208ENST00000566482 ERVV-1B6SEH8 477 aa16.71■□□□□ 0.27
CNEP1R1-208ENST00000566482 DPEP1P16444 411 aa16.71■□□□□ 0.27
CNEP1R1-208ENST00000566482 C8orf58Q8NAV2 365 aa16.71■□□□□ 0.27
CNEP1R1-208ENST00000566482 DDX21Q9NR30 783 aaKnown RBP eCLIP16.71■□□□□ 0.27
CNEP1R1-208ENST00000566482 CHPF2Q9P2E5 772 aa16.71■□□□□ 0.27
CNEP1R1-208ENST00000566482 ELL2O00472 640 aaPredicted RBP16.7■□□□□ 0.26
CNEP1R1-208ENST00000566482 WDR63Q8IWG1 891 aa16.7■□□□□ 0.26
CNEP1R1-208ENST00000566482 ZBTB3Q9H5J0 574 aa16.7■□□□□ 0.26
CNEP1R1-208ENST00000566482 NIP7Q9Y221 180 aaKnown RBP eCLIP16.7■□□□□ 0.26
CNEP1R1-208ENST00000566482 KCNA3P22001 575 aa16.69■□□□□ 0.26
CNEP1R1-208ENST00000566482 PRR5LQ6MZQ0 368 aa16.69■□□□□ 0.26
CNEP1R1-208ENST00000566482 XAGE3Q8WTP9 111 aa16.69■□□□□ 0.26
CNEP1R1-208ENST00000566482 CHRNA5P30532 468 aa16.68■□□□□ 0.26
CNEP1R1-208ENST00000566482 AIMP1Q12904 312 aaKnown RBP16.68■□□□□ 0.26
CNEP1R1-208ENST00000566482 COPS6Q7L5N1 327 aa16.68■□□□□ 0.26
CNEP1R1-208ENST00000566482 CCDC24Q8N4L8 307 aa16.68■□□□□ 0.26
CNEP1R1-208ENST00000566482 TSPYL6Q8N831 410 aa16.68■□□□□ 0.26
CNEP1R1-208ENST00000566482 CNBD1Q8NA66 436 aa16.68■□□□□ 0.26
CNEP1R1-208ENST00000566482 DBF4Q9UBU7 674 aaPredicted RBP16.68■□□□□ 0.26
CNEP1R1-208ENST00000566482 ATP10DQ9P241 1426 aa16.68■□□□□ 0.26
CNEP1R1-208ENST00000566482 NUP98P52948 1817 aa16.68■□□□□ 0.26
CNEP1R1-208ENST00000566482 NPHP1O15259 732 aa16.67■□□□□ 0.26
CNEP1R1-208ENST00000566482 GRIN3BO60391 1043 aa16.67■□□□□ 0.26
CNEP1R1-208ENST00000566482 GIGYF2Q6Y7W6 1299 aaKnown RBP16.67■□□□□ 0.26
CNEP1R1-208ENST00000566482 NBPF5PQ86XG9 351 aaPredicted RBP16.67■□□□□ 0.26
CNEP1R1-208ENST00000566482 MIER1Q8N108 512 aa16.67■□□□□ 0.26
CNEP1R1-208ENST00000566482 BRCA1P38398 1863 aaKnown RBP16.67■□□□□ 0.26
CNEP1R1-208ENST00000566482 ANKRD31Q8N7Z5 1873 aa16.67■□□□□ 0.26
CNEP1R1-208ENST00000566482 FANCIQ9NVI1 1328 aa16.67■□□□□ 0.26
CNEP1R1-208ENST00000566482 GOLGB1Q14789 3259 aaKnown RBP16.66■□□□□ 0.26
CNEP1R1-208ENST00000566482 FAM177BA6PVY3 158 aa16.66■□□□□ 0.26
CNEP1R1-208ENST00000566482 GPTP24298 496 aa16.65■□□□□ 0.26
CNEP1R1-208ENST00000566482 ST5P78524 1137 aa16.65■□□□□ 0.26
CNEP1R1-208ENST00000566482 BRIP1Q9BX63 1249 aa16.65■□□□□ 0.26
CNEP1R1-208ENST00000566482 SPINK5Q9NQ38 1064 aaPredicted RBP16.65■□□□□ 0.26
CNEP1R1-208ENST00000566482 HYPKQ9NX55 129 aa16.65■□□□□ 0.26
CNEP1R1-208ENST00000566482 BCS1LQ9Y276 419 aa16.65■□□□□ 0.26
CNEP1R1-208ENST00000566482 UBN2Q6ZU65 1347 aa16.65■□□□□ 0.26
CNEP1R1-208ENST00000566482 ZNF521Q96K83 1311 aa16.65■□□□□ 0.26
CNEP1R1-208ENST00000566482 TWISTNBQ3B726 338 aaPredicted RBP16.64■□□□□ 0.25
CNEP1R1-208ENST00000566482 CCDC30Q5VVM6 783 aa16.64■□□□□ 0.25
CNEP1R1-208ENST00000566482 C2CD5Q86YS7 1000 aa16.64■□□□□ 0.25
CNEP1R1-208ENST00000566482 ZNF34Q8IZ26 560 aa16.64■□□□□ 0.25
CNEP1R1-208ENST00000566482 PIM2Q9P1W9 311 aa16.64■□□□□ 0.25
CNEP1R1-208ENST00000566482 H0YIN7 160 aa16.63■□□□□ 0.25
CNEP1R1-208ENST00000566482 YY1P25490 414 aa16.63■□□□□ 0.25
CNEP1R1-208ENST00000566482 PDE6BP35913 854 aa16.63■□□□□ 0.25
CNEP1R1-208ENST00000566482 TPTE2Q6XPS3 522 aa16.63■□□□□ 0.25
CNEP1R1-208ENST00000566482 DLEC1Q9Y238 1755 aa16.63■□□□□ 0.25
CNEP1R1-208ENST00000566482 COL11A2P13942 1736 aaPredicted RBP16.62■□□□□ 0.25
CNEP1R1-208ENST00000566482 GOLGA2Q08379 1002 aa16.62■□□□□ 0.25
CNEP1R1-208ENST00000566482 DALRD3Q5D0E6 543 aaKnown RBP16.62■□□□□ 0.25
CNEP1R1-208ENST00000566482 PLBD2Q8NHP8 589 aa16.62■□□□□ 0.25
CNEP1R1-208ENST00000566482 CHMP4AQ9BY43 222 aa16.62■□□□□ 0.25
CNEP1R1-208ENST00000566482 NYXQ9GZU5 481 aa16.62■□□□□ 0.25
CNEP1R1-208ENST00000566482 CHD4Q14839 1912 aa16.62■□□□□ 0.25
CNEP1R1-208ENST00000566482 IBTKQ9P2D0 1353 aaPredicted RBP16.62■□□□□ 0.25
CNEP1R1-208ENST00000566482 ANKRD36CQ5JPF3 1778 aa16.61■□□□□ 0.25
CNEP1R1-208ENST00000566482 EXOSC9Q06265 439 aaKnown RBP16.61■□□□□ 0.25
CNEP1R1-208ENST00000566482 SUSD4Q5VX71 490 aa16.61■□□□□ 0.25
CNEP1R1-208ENST00000566482 ANKRD13DQ6ZTN6 518 aa16.61■□□□□ 0.25
CNEP1R1-208ENST00000566482 MYH16Q9H6N6 1097 aa16.61■□□□□ 0.25
CNEP1R1-208ENST00000566482 PHAXQ9H814 394 aaKnown RBP16.61■□□□□ 0.25
CNEP1R1-208ENST00000566482 PDZRN3Q9UPQ7 1066 aa16.61■□□□□ 0.25
CNEP1R1-208ENST00000566482 TCERG1O14776 1098 aaKnown RBP16.6■□□□□ 0.25
CNEP1R1-208ENST00000566482 NTSR2O95665 410 aa16.6■□□□□ 0.25
CNEP1R1-208ENST00000566482 GTF2E1P29083 439 aaPredicted RBP16.6■□□□□ 0.25
CNEP1R1-208ENST00000566482 TCIRG1Q13488 830 aa16.6■□□□□ 0.25
CNEP1R1-208ENST00000566482 PARP10Q53GL7 1025 aa16.6■□□□□ 0.25
CNEP1R1-208ENST00000566482 HSP90AB3PQ58FF7 597 aa16.6■□□□□ 0.25
CNEP1R1-208ENST00000566482 NUTM1Q86Y26 1132 aa16.6■□□□□ 0.25
CNEP1R1-208ENST00000566482 ARFGEF1Q9Y6D6 1849 aa16.6■□□□□ 0.25
CNEP1R1-208ENST00000566482 ABCC12Q96J65 1359 aa16.6■□□□□ 0.25
CNEP1R1-208ENST00000566482 ERFEQ4G0M1 354 aa16.59■□□□□ 0.25
CNEP1R1-208ENST00000566482 PPP1R42Q7Z4L9 355 aa16.59■□□□□ 0.25
CNEP1R1-208ENST00000566482 ZNF622Q969S3 477 aaKnown RBP eCLIP16.59■□□□□ 0.25
CNEP1R1-208ENST00000566482 STK31Q9BXU1 1019 aa16.59■□□□□ 0.25
CNEP1R1-208ENST00000566482 UTRNP46939 3433 aa16.59■□□□□ 0.25
CNEP1R1-208ENST00000566482 ARFGEF2Q9Y6D5 1785 aa16.59■□□□□ 0.25
CNEP1R1-208ENST00000566482 SRGNP10124 158 aa16.58■□□□□ 0.24
CNEP1R1-208ENST00000566482 NLRP10Q86W26 655 aa16.58■□□□□ 0.24
CNEP1R1-208ENST00000566482 TTLL6Q8N841 843 aa16.58■□□□□ 0.24
CNEP1R1-208ENST00000566482 TNRC6CQ9HCJ0 1690 aaKnown RBP16.58■□□□□ 0.24
CNEP1R1-208ENST00000566482 RIC1Q4ADV7 1423 aa16.57■□□□□ 0.24
CNEP1R1-208ENST00000566482 KLRG2A4D1S0 409 aaPredicted RBP16.57■□□□□ 0.24
CNEP1R1-208ENST00000566482 VAMP4O75379 141 aa16.57■□□□□ 0.24
CNEP1R1-208ENST00000566482 ARHGAP27Q6ZUM4 889 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms