RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 HIP1O00291 1037 aa16.27■□□□□ 0.19
LINC00563-201ENST00000566370 DDIT3P35638 169 aa16.27■□□□□ 0.19
LINC00563-201ENST00000566370 SLC39A6Q13433 755 aa16.27■□□□□ 0.19
LINC00563-201ENST00000566370 PROSER3Q2NL68 480 aa16.27■□□□□ 0.19
LINC00563-201ENST00000566370 METTL22Q9BUU2 404 aaPredicted RBP16.27■□□□□ 0.19
LINC00563-201ENST00000566370 ABCA3Q99758 1704 aa16.26■□□□□ 0.19
LINC00563-201ENST00000566370 CYP27B1O15528 508 aa16.26■□□□□ 0.19
LINC00563-201ENST00000566370 MYL6BP14649 208 aa16.26■□□□□ 0.19
LINC00563-201ENST00000566370 IL2RBP14784 551 aa16.26■□□□□ 0.19
LINC00563-201ENST00000566370 RAB3GAP1Q15042 981 aa16.26■□□□□ 0.19
LINC00563-201ENST00000566370 ANKRD13DQ6ZTN6 518 aa16.26■□□□□ 0.19
LINC00563-201ENST00000566370 NUTM1Q86Y26 1132 aa16.26■□□□□ 0.19
LINC00563-201ENST00000566370 XAGE3Q8WTP9 111 aa16.26■□□□□ 0.19
LINC00563-201ENST00000566370 ZNF496Q96IT1 587 aaPredicted RBP16.26■□□□□ 0.19
LINC00563-201ENST00000566370 CARD10Q9BWT7 1032 aa16.26■□□□□ 0.19
LINC00563-201ENST00000566370 NHSL1Q5SYE7 1610 aa16.25■□□□□ 0.19
LINC00563-201ENST00000566370 COL5A2P05997 1499 aaPredicted RBP16.25■□□□□ 0.19
LINC00563-201ENST00000566370 EVA1CP58658 441 aa16.25■□□□□ 0.19
LINC00563-201ENST00000566370 CWF19L2Q2TBE0 894 aaKnown RBP16.25■□□□□ 0.19
LINC00563-201ENST00000566370 ECHDC1Q9NTX5 307 aa16.25■□□□□ 0.19
LINC00563-201ENST00000566370 PDIA6Q15084 440 aa16.24■□□□□ 0.19
LINC00563-201ENST00000566370 COPS6Q7L5N1 327 aa16.24■□□□□ 0.19
LINC00563-201ENST00000566370 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
LINC00563-201ENST00000566370 DIAPH3Q9NSV4 1193 aa16.24■□□□□ 0.19
LINC00563-201ENST00000566370 AFDNP55196 1824 aaKnown RBP16.23■□□□□ 0.19
LINC00563-201ENST00000566370 PRAMEF22A3QJZ6 481 aa16.23■□□□□ 0.19
LINC00563-201ENST00000566370 NEURL1BA8MQ27 555 aa16.23■□□□□ 0.19
LINC00563-201ENST00000566370 MYD88Q99836 296 aa16.23■□□□□ 0.19
LINC00563-201ENST00000566370 COL15A1P39059 1388 aa16.23■□□□□ 0.19
LINC00563-201ENST00000566370 GCKRQ14397 625 aa16.22■□□□□ 0.19
LINC00563-201ENST00000566370 TSHZ3Q63HK5 1081 aa16.22■□□□□ 0.19
LINC00563-201ENST00000566370 PLBD2Q8NHP8 589 aa16.22■□□□□ 0.19
LINC00563-201ENST00000566370 PI4K2BQ8TCG2 481 aa16.22■□□□□ 0.19
LINC00563-201ENST00000566370 SUCLG2Q96I99 432 aa16.22■□□□□ 0.19
LINC00563-201ENST00000566370 ARFGEF2Q9Y6D5 1785 aa16.22■□□□□ 0.19
LINC00563-201ENST00000566370 TNPO1Q92973 898 aaKnown RBP16.21■□□□□ 0.19
LINC00563-201ENST00000566370 EVI5LQ96CN4 794 aa16.21■□□□□ 0.19
LINC00563-201ENST00000566370 BICC1Q9H694 974 aaKnown RBP16.21■□□□□ 0.19
LINC00563-201ENST00000566370 ISY1Q9ULR0 285 aaKnown RBP16.21■□□□□ 0.19
LINC00563-201ENST00000566370 ZNF335Q9H4Z2 1342 aaPredicted RBP16.21■□□□□ 0.19
LINC00563-201ENST00000566370 TRAK2O60296 914 aa16.2■□□□□ 0.18
LINC00563-201ENST00000566370 NEK4P51957 841 aa16.2■□□□□ 0.18
LINC00563-201ENST00000566370 NKX1-1Q15270 411 aaPredicted RBP16.2■□□□□ 0.18
LINC00563-201ENST00000566370 AACSQ86V21 672 aa16.2■□□□□ 0.18
LINC00563-201ENST00000566370 UBR2Q8IWV8 1755 aa16.2■□□□□ 0.18
LINC00563-201ENST00000566370 PAPPAQ13219 1627 aa16.2■□□□□ 0.18
LINC00563-201ENST00000566370 CD2BP2O95400 341 aaKnown RBP16.19■□□□□ 0.18
LINC00563-201ENST00000566370 IL17RAQ96F46 866 aa16.19■□□□□ 0.18
LINC00563-201ENST00000566370 TEX13AQ9BXU3 409 aaPredicted RBP16.19■□□□□ 0.18
LINC00563-201ENST00000566370 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
LINC00563-201ENST00000566370 RAD50Q92878 1312 aa16.19■□□□□ 0.18
LINC00563-201ENST00000566370 SGSM2O43147 1006 aa16.19■□□□□ 0.18
LINC00563-201ENST00000566370 IGKV5-2P06315 115 aa16.19■□□□□ 0.18
LINC00563-201ENST00000566370 USP16Q9Y5T5 823 aa16.19■□□□□ 0.18
LINC00563-201ENST00000566370 CLEC17AQ6ZS10 378 aa16.18■□□□□ 0.18
LINC00563-201ENST00000566370 GOLGA6L3A6NEY3 463 aa16.17■□□□□ 0.18
LINC00563-201ENST00000566370 HSPA4P34932 840 aa16.17■□□□□ 0.18
LINC00563-201ENST00000566370 INTS4Q96HW7 963 aaKnown RBP16.17■□□□□ 0.18
LINC00563-201ENST00000566370 STRN4Q9NRL3 753 aa16.17■□□□□ 0.18
LINC00563-201ENST00000566370 UNC5CLQ8IV45 518 aa16.16■□□□□ 0.18
LINC00563-201ENST00000566370 COPRSQ9NQ92 184 aa16.16■□□□□ 0.18
LINC00563-201ENST00000566370 TMOD3Q9NYL9 352 aa16.16■□□□□ 0.18
LINC00563-201ENST00000566370 PA2G4Q9UQ80 394 aaKnown RBP16.16■□□□□ 0.18
LINC00563-201ENST00000566370 COL14A1Q05707 1796 aaKnown RBP16.16■□□□□ 0.18
LINC00563-201ENST00000566370 A0A087WZG4 1122 aa16.15■□□□□ 0.18
LINC00563-201ENST00000566370 MAP4K4O95819 1239 aaPredicted RBP16.15■□□□□ 0.18
LINC00563-201ENST00000566370 CWC25Q9NXE8 425 aaPredicted RBP16.15■□□□□ 0.18
LINC00563-201ENST00000566370 UBE3BQ7Z3V4 1068 aa16.14■□□□□ 0.17
LINC00563-201ENST00000566370 DDX54Q8TDD1 881 aaKnown RBP16.14■□□□□ 0.17
LINC00563-201ENST00000566370 KDM4FA0A1W2PPD8 638 aa16.13■□□□□ 0.17
LINC00563-201ENST00000566370 ZKSCAN1P17029 563 aaPredicted RBP16.13■□□□□ 0.17
LINC00563-201ENST00000566370 RABL6Q3YEC7 729 aaPredicted RBP16.13■□□□□ 0.17
LINC00563-201ENST00000566370 RNF20Q5VTR2 975 aa16.13■□□□□ 0.17
LINC00563-201ENST00000566370 CWC27Q6UX04 472 aaKnown RBP16.13■□□□□ 0.17
LINC00563-201ENST00000566370 LRP10Q7Z4F1 713 aa16.13■□□□□ 0.17
LINC00563-201ENST00000566370 TNS2Q63HR2 1409 aa16.13■□□□□ 0.17
LINC00563-201ENST00000566370 GLI3P10071 1580 aa16.13■□□□□ 0.17
LINC00563-201ENST00000566370 RFX7Q2KHR2 1363 aa16.13■□□□□ 0.17
LINC00563-201ENST00000566370 KCPQ6ZWJ8 1503 aa16.13■□□□□ 0.17
LINC00563-201ENST00000566370 SSFA2P28290 1259 aa16.12■□□□□ 0.17
LINC00563-201ENST00000566370 KCNJ4P48050 445 aa16.12■□□□□ 0.17
LINC00563-201ENST00000566370 NUP188Q5SRE5 1749 aa16.12■□□□□ 0.17
LINC00563-201ENST00000566370 TICAM2Q86XR7 235 aa16.12■□□□□ 0.17
LINC00563-201ENST00000566370 VSIG10Q8N0Z9 540 aa16.12■□□□□ 0.17
LINC00563-201ENST00000566370 CCDC191Q8NCU4 936 aa16.12■□□□□ 0.17
LINC00563-201ENST00000566370 KAZALD1Q96I82 304 aa16.12■□□□□ 0.17
LINC00563-201ENST00000566370 TMX3Q96JJ7 454 aa16.12■□□□□ 0.17
LINC00563-201ENST00000566370 SHANK3Q9BYB0 1731 aa16.12■□□□□ 0.17
LINC00563-201ENST00000566370 SIL1Q9H173 461 aa16.12■□□□□ 0.17
LINC00563-201ENST00000566370 SASH1O94885 1247 aa16.11■□□□□ 0.17
LINC00563-201ENST00000566370 CUL4AQ13619 759 aa16.11■□□□□ 0.17
LINC00563-201ENST00000566370 KIF6Q6ZMV9 814 aa16.11■□□□□ 0.17
LINC00563-201ENST00000566370 FSD1Q9BTV5 496 aa16.11■□□□□ 0.17
LINC00563-201ENST00000566370 LSG1Q9H089 658 aaKnown RBP16.11■□□□□ 0.17
LINC00563-201ENST00000566370 BAG4O95429 457 aaKnown RBP16.11■□□□□ 0.17
LINC00563-201ENST00000566370 STARD3NLO95772 234 aa16.11■□□□□ 0.17
LINC00563-201ENST00000566370 PLCH1Q4KWH8 1693 aa16.1■□□□□ 0.17
LINC00563-201ENST00000566370 H7C1W4 665 aa16.1■□□□□ 0.17
LINC00563-201ENST00000566370 PSMA5P28066 241 aa16.1■□□□□ 0.17
LINC00563-201ENST00000566370 EAF2Q96CJ1 260 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms