RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 GYS1P13807 737 aa10.51□□□□□ -0.73
CDH13-208ENST00000566333 TRAPPC3LQ5T215 181 aa10.51□□□□□ -0.73
CDH13-208ENST00000566333 G2E3Q7L622 706 aa10.51□□□□□ -0.73
CDH13-208ENST00000566333 DZIP3Q86Y13 1208 aaKnown RBP10.51□□□□□ -0.73
CDH13-208ENST00000566333 XAGE3Q8WTP9 111 aa10.51□□□□□ -0.73
CDH13-208ENST00000566333 SSH1Q8WYL5 1049 aa10.51□□□□□ -0.73
CDH13-208ENST00000566333 NARFQ9UHQ1 456 aa10.51□□□□□ -0.73
CDH13-208ENST00000566333 GOLGB1Q14789 3259 aaKnown RBP10.5□□□□□ -0.73
CDH13-208ENST00000566333 USPL1Q5W0Q7 1092 aa10.5□□□□□ -0.73
CDH13-208ENST00000566333 ZNF428Q96B54 188 aa10.5□□□□□ -0.73
CDH13-208ENST00000566333 SGIP1Q9BQI5 828 aa10.5□□□□□ -0.73
CDH13-208ENST00000566333 BCL2L13Q9BXK5 485 aa10.5□□□□□ -0.73
CDH13-208ENST00000566333 PHAXQ9H814 394 aaKnown RBP10.5□□□□□ -0.73
CDH13-208ENST00000566333 HYPKQ9NX55 129 aa10.5□□□□□ -0.73
CDH13-208ENST00000566333 TBC1D2BQ9UPU7 963 aa10.5□□□□□ -0.73
CDH13-208ENST00000566333 MAP3K15Q6ZN16 1313 aa10.5□□□□□ -0.73
CDH13-208ENST00000566333 PXDNLA1KZ92 1463 aa10.49□□□□□ -0.73
CDH13-208ENST00000566333 A0A087WZG4 1122 aa10.49□□□□□ -0.73
CDH13-208ENST00000566333 RGL2O15211 777 aa10.49□□□□□ -0.73
CDH13-208ENST00000566333 ZBTB7AO95365 584 aa10.49□□□□□ -0.73
CDH13-208ENST00000566333 RFC4P35249 363 aa10.49□□□□□ -0.73
CDH13-208ENST00000566333 RARSP54136 660 aaKnown RBP10.49□□□□□ -0.73
CDH13-208ENST00000566333 MSL1Q68DK7 614 aa10.49□□□□□ -0.73
CDH13-208ENST00000566333 COPS6Q7L5N1 327 aa10.49□□□□□ -0.73
CDH13-208ENST00000566333 MRPL50Q8N5N7 158 aaKnown RBP10.49□□□□□ -0.73
CDH13-208ENST00000566333 STK31Q9BXU1 1019 aa10.49□□□□□ -0.73
CDH13-208ENST00000566333 CACNA1SQ13698 1873 aa10.49□□□□□ -0.73
CDH13-208ENST00000566333 SLC4A2P04920 1241 aa10.48□□□□□ -0.73
CDH13-208ENST00000566333 PTGER2P43116 358 aa10.48□□□□□ -0.73
CDH13-208ENST00000566333 FLIIQ13045 1269 aa10.48□□□□□ -0.73
CDH13-208ENST00000566333 FKBP8Q14318 412 aa10.48□□□□□ -0.73
CDH13-208ENST00000566333 HLFQ16534 295 aa10.48□□□□□ -0.73
CDH13-208ENST00000566333 ALDH1L2Q3SY69 923 aa10.48□□□□□ -0.73
CDH13-208ENST00000566333 SLC16A10Q8TF71 515 aa10.48□□□□□ -0.73
CDH13-208ENST00000566333 CHMP4AQ9BY43 222 aa10.48□□□□□ -0.73
CDH13-208ENST00000566333 MTFR1LQ9H019 292 aa10.48□□□□□ -0.73
CDH13-208ENST00000566333 ZBTB3Q9H5J0 574 aa10.48□□□□□ -0.73
CDH13-208ENST00000566333 UBN2Q6ZU65 1347 aa10.48□□□□□ -0.73
CDH13-208ENST00000566333 C10orf71Q711Q0 1435 aa10.48□□□□□ -0.73
CDH13-208ENST00000566333 ERVV-1B6SEH8 477 aa10.47□□□□□ -0.73
CDH13-208ENST00000566333 ZPR1O75312 459 aa10.47□□□□□ -0.73
CDH13-208ENST00000566333 BRPF1P55201 1214 aaPredicted RBP10.47□□□□□ -0.73
CDH13-208ENST00000566333 DDR1Q08345 913 aa10.47□□□□□ -0.73
CDH13-208ENST00000566333 AIMP1Q12904 312 aaKnown RBP10.47□□□□□ -0.73
CDH13-208ENST00000566333 KIF6Q6ZMV9 814 aa10.47□□□□□ -0.73
CDH13-208ENST00000566333 SMC4Q9NTJ3 1288 aa10.47□□□□□ -0.73
CDH13-208ENST00000566333 IBTKQ9P2D0 1353 aaPredicted RBP10.47□□□□□ -0.73
CDH13-208ENST00000566333 NFIXQ14938 502 aa10.46□□□□□ -0.73
CDH13-208ENST00000566333 TBC1D9BQ66K14 1250 aa10.46□□□□□ -0.73
CDH13-208ENST00000566333 GIGYF2Q6Y7W6 1299 aaKnown RBP10.46□□□□□ -0.73
CDH13-208ENST00000566333 PLBD2Q8NHP8 589 aa10.46□□□□□ -0.73
CDH13-208ENST00000566333 CARMIL3Q8ND23 1372 aa10.46□□□□□ -0.74
CDH13-208ENST00000566333 KIF16BQ96L93 1317 aa10.45□□□□□ -0.74
CDH13-208ENST00000566333 PI4KAP2A4QPH2 592 aa10.45□□□□□ -0.74
CDH13-208ENST00000566333 POLRMTO00411 1230 aaKnown RBP10.45□□□□□ -0.74
CDH13-208ENST00000566333 BCAR3O75815 825 aa10.45□□□□□ -0.74
CDH13-208ENST00000566333 MMP10P09238 476 aa10.45□□□□□ -0.74
CDH13-208ENST00000566333 TM4SF1P30408 202 aa10.45□□□□□ -0.74
CDH13-208ENST00000566333 CLEC4GQ6UXB4 293 aa10.45□□□□□ -0.74
CDH13-208ENST00000566333 ANKRD13DQ6ZTN6 518 aa10.45□□□□□ -0.74
CDH13-208ENST00000566333 PI4KAP1Q8N8J0 262 aa10.45□□□□□ -0.74
CDH13-208ENST00000566333 ATF5Q9Y2D1 282 aaPredicted RBP10.45□□□□□ -0.74
CDH13-208ENST00000566333 RIC1Q4ADV7 1423 aa10.44□□□□□ -0.74
CDH13-208ENST00000566333 ABCC12Q96J65 1359 aa10.44□□□□□ -0.74
CDH13-208ENST00000566333 PTPRCP08575 1304 aa10.44□□□□□ -0.74
CDH13-208ENST00000566333 FKBP5Q13451 457 aaPredicted RBP10.44□□□□□ -0.74
CDH13-208ENST00000566333 KSR2Q6VAB6 950 aa10.44□□□□□ -0.74
CDH13-208ENST00000566333 NPM2Q86SE8 214 aaKnown RBP10.44□□□□□ -0.74
CDH13-208ENST00000566333 ZNF34Q8IZ26 560 aa10.44□□□□□ -0.74
CDH13-208ENST00000566333 NLGN1Q8N2Q7 840 aa10.44□□□□□ -0.74
CDH13-208ENST00000566333 ARXQ96QS3 562 aa10.44□□□□□ -0.74
CDH13-208ENST00000566333 ZNF652Q9Y2D9 606 aa10.44□□□□□ -0.74
CDH13-208ENST00000566333 MAP3K2Q9Y2U5 619 aa10.44□□□□□ -0.74
CDH13-208ENST00000566333 TAF1P21675 1872 aa10.44□□□□□ -0.74
CDH13-208ENST00000566333 SPEF2Q9C093 1822 aa10.44□□□□□ -0.74
CDH13-208ENST00000566333 ABCC4O15439 1325 aa10.43□□□□□ -0.74
CDH13-208ENST00000566333 F6X3S4 739 aa10.43□□□□□ -0.74
CDH13-208ENST00000566333 ISCA1Q9BUE6 129 aa10.43□□□□□ -0.74
CDH13-208ENST00000566333 METTL22Q9BUU2 404 aaPredicted RBP10.43□□□□□ -0.74
CDH13-208ENST00000566333 SPON1Q9HCB6 807 aa10.43□□□□□ -0.74
CDH13-208ENST00000566333 RCAN3Q9UKA8 241 aa10.43□□□□□ -0.74
CDH13-208ENST00000566333 TNNQ9UQP3 1299 aa10.43□□□□□ -0.74
CDH13-208ENST00000566333 COL4A1P02462 1669 aa10.43□□□□□ -0.74
CDH13-208ENST00000566333 ARFGEF1Q9Y6D6 1849 aa10.42□□□□□ -0.74
CDH13-208ENST00000566333 A0A1B0GUL6 1792 aa10.42□□□□□ -0.74
CDH13-208ENST00000566333 NTSR2O95665 410 aa10.42□□□□□ -0.74
CDH13-208ENST00000566333 DDX58O95786 925 aaKnown RBP10.42□□□□□ -0.74
CDH13-208ENST00000566333 IGKV5-2P06315 115 aa10.42□□□□□ -0.74
CDH13-208ENST00000566333 GPTP24298 496 aa10.42□□□□□ -0.74
CDH13-208ENST00000566333 TCIRG1Q13488 830 aa10.42□□□□□ -0.74
CDH13-208ENST00000566333 BICDL1Q6ZP65 573 aa10.42□□□□□ -0.74
CDH13-208ENST00000566333 RIC3Q7Z5B4 369 aa10.42□□□□□ -0.74
CDH13-208ENST00000566333 DNAAF4Q8WXU2 420 aa10.42□□□□□ -0.74
CDH13-208ENST00000566333 NOB1Q9ULX3 412 aaKnown RBP10.42□□□□□ -0.74
CDH13-208ENST00000566333 NIP7Q9Y221 180 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDH13-208ENST00000566333 TRIM27P14373 513 aa10.41□□□□□ -0.74
CDH13-208ENST00000566333 CWF19L2Q2TBE0 894 aaKnown RBP10.41□□□□□ -0.74
CDH13-208ENST00000566333 HSP90AB3PQ58FF7 597 aa10.41□□□□□ -0.74
CDH13-208ENST00000566333 PRR5LQ6MZQ0 368 aa10.41□□□□□ -0.74
CDH13-208ENST00000566333 NLRP10Q86W26 655 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms