RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SLX4Q8IY92 1834 aa24.21■■□□□ 1.47
USB1-213ENST00000566292 TIAM2Q8IVF5 1701 aa24.21■■□□□ 1.47
USB1-213ENST00000566292 NUP98P52948 1817 aa24.2■■□□□ 1.46
USB1-213ENST00000566292 MYBBP1AQ9BQG0 1328 aaKnown RBP24.19■■□□□ 1.46
USB1-213ENST00000566292 TNRC6CQ9HCJ0 1690 aaKnown RBP24.19■■□□□ 1.46
USB1-213ENST00000566292 HSPA6P17066 643 aa24.19■■□□□ 1.46
USB1-213ENST00000566292 ZNF652Q9Y2D9 606 aa24.19■■□□□ 1.46
USB1-213ENST00000566292 NFKBIEO00221 500 aa24.18■■□□□ 1.46
USB1-213ENST00000566292 NPHP1O15259 732 aa24.18■■□□□ 1.46
USB1-213ENST00000566292 ST5P78524 1137 aa24.18■■□□□ 1.46
USB1-213ENST00000566292 DICER1Q9UPY3 1922 aaKnown RBP24.18■■□□□ 1.46
USB1-213ENST00000566292 RGL2O15211 777 aa24.17■■□□□ 1.46
USB1-213ENST00000566292 HLFQ16534 295 aa24.17■■□□□ 1.46
USB1-213ENST00000566292 NBPF5PQ86XG9 351 aaPredicted RBP24.17■■□□□ 1.46
USB1-213ENST00000566292 LMNB1P20700 586 aa24.16■■□□□ 1.46
USB1-213ENST00000566292 RIPK4P57078 832 aa24.16■■□□□ 1.46
USB1-213ENST00000566292 NIP7Q9Y221 180 aaKnown RBP eCLIP24.16■■□□□ 1.46
USB1-213ENST00000566292 TOMM70O94826 608 aa24.15■■□□□ 1.46
USB1-213ENST00000566292 SRGNP10124 158 aa24.15■■□□□ 1.46
USB1-213ENST00000566292 ZNF219Q9P2Y4 722 aaPredicted RBP24.15■■□□□ 1.46
USB1-213ENST00000566292 KDM2BQ8NHM5 1336 aa24.14■■□□□ 1.46
USB1-213ENST00000566292 C21orf2O43822 256 aa24.14■■□□□ 1.45
USB1-213ENST00000566292 TMPOP42166 694 aaKnown RBP24.14■■□□□ 1.45
USB1-213ENST00000566292 STYK1Q6J9G0 422 aa24.14■■□□□ 1.45
USB1-213ENST00000566292 NGEFQ8N5V2 710 aa24.14■■□□□ 1.45
USB1-213ENST00000566292 ZC3H4Q9UPT8 1303 aaKnown RBP24.13■■□□□ 1.45
USB1-213ENST00000566292 TSPYL4Q9UJ04 414 aa24.13■■□□□ 1.45
USB1-213ENST00000566292 RRP7AQ9Y3A4 280 aaKnown RBP24.13■■□□□ 1.45
USB1-213ENST00000566292 TTLL7Q6ZT98 887 aa24.12■■□□□ 1.45
USB1-213ENST00000566292 CNKSR1Q969H4 720 aa24.12■■□□□ 1.45
USB1-213ENST00000566292 MASTLQ96GX5 879 aa24.12■■□□□ 1.45
USB1-213ENST00000566292 FAM177BA6PVY3 158 aa24.11■■□□□ 1.45
USB1-213ENST00000566292 PRPF40BQ6NWY9 871 aaKnown RBP24.11■■□□□ 1.45
USB1-213ENST00000566292 TPTE2Q6XPS3 522 aa24.11■■□□□ 1.45
USB1-213ENST00000566292 CCDC146Q8IYE0 955 aa24.11■■□□□ 1.45
USB1-213ENST00000566292 RRAGCQ9HB90 399 aa24.11■■□□□ 1.45
USB1-213ENST00000566292 MAP3K15Q6ZN16 1313 aa24.1■■□□□ 1.45
USB1-213ENST00000566292 KLRG2A4D1S0 409 aaPredicted RBP24.1■■□□□ 1.45
USB1-213ENST00000566292 ERVV-1B6SEH8 477 aa24.1■■□□□ 1.45
USB1-213ENST00000566292 MYL6BP14649 208 aa24.1■■□□□ 1.45
USB1-213ENST00000566292 RBM46Q8TBY0 533 aaKnown RBP24.09■■□□□ 1.45
USB1-213ENST00000566292 GLTPD2A6NH11 291 aa24.08■■□□□ 1.45
USB1-213ENST00000566292 LMOD3Q0VAK6 560 aa24.08■■□□□ 1.45
USB1-213ENST00000566292 LTBP3Q9NS15 1303 aa24.08■■□□□ 1.44
USB1-213ENST00000566292 NPR1P16066 1061 aa24.07■■□□□ 1.44
USB1-213ENST00000566292 KIF6Q6ZMV9 814 aa24.07■■□□□ 1.44
USB1-213ENST00000566292 C16orf71Q8IYS4 520 aaPredicted RBP24.07■■□□□ 1.44
USB1-213ENST00000566292 BABAM1Q9NWV8 329 aa24.07■■□□□ 1.44
USB1-213ENST00000566292 ERBB4Q15303 1308 aa24.07■■□□□ 1.44
USB1-213ENST00000566292 NEUROD2Q15784 382 aa24.06■■□□□ 1.44
USB1-213ENST00000566292 LRP10Q7Z4F1 713 aa24.06■■□□□ 1.44
USB1-213ENST00000566292 C7orf43Q8WVR3 580 aa24.06■■□□□ 1.44
USB1-213ENST00000566292 RUNDC1Q96C34 613 aa24.06■■□□□ 1.44
USB1-213ENST00000566292 ZBTB3Q9H5J0 574 aa24.06■■□□□ 1.44
USB1-213ENST00000566292 PRKRIP1Q9H875 184 aaPredicted RBP24.06■■□□□ 1.44
USB1-213ENST00000566292 ABCC12Q96J65 1359 aa24.05■■□□□ 1.44
USB1-213ENST00000566292 WDR43Q15061 677 aaKnown RBP eCLIP24.05■■□□□ 1.44
USB1-213ENST00000566292 PDIA6Q15084 440 aa24.05■■□□□ 1.44
USB1-213ENST00000566292 TAOK3Q9H2K8 898 aa24.05■■□□□ 1.44
USB1-213ENST00000566292 ADAMTS8Q9UP79 889 aa24.05■■□□□ 1.44
USB1-213ENST00000566292 UBN2Q6ZU65 1347 aa24.05■■□□□ 1.44
USB1-213ENST00000566292 WDR90Q96KV7 1748 aa24.04■■□□□ 1.44
USB1-213ENST00000566292 EIF2S2P20042 333 aaKnown RBP24.04■■□□□ 1.44
USB1-213ENST00000566292 TRIM35Q9UPQ4 493 aa24.04■■□□□ 1.44
USB1-213ENST00000566292 GPTP24298 496 aa24.03■■□□□ 1.44
USB1-213ENST00000566292 GTF2E1P29083 439 aaPredicted RBP24.03■■□□□ 1.44
USB1-213ENST00000566292 APLP1P51693 650 aa24.03■■□□□ 1.44
USB1-213ENST00000566292 ERFEQ4G0M1 354 aa24.03■■□□□ 1.44
USB1-213ENST00000566292 SOGA3Q5TF21 947 aa24.03■■□□□ 1.44
USB1-213ENST00000566292 NUTM1Q86Y26 1132 aa24.03■■□□□ 1.44
USB1-213ENST00000566292 NYXQ9GZU5 481 aa24.03■■□□□ 1.44
USB1-213ENST00000566292 PROSER3Q2NL68 480 aa24.02■■□□□ 1.44
USB1-213ENST00000566292 ANKRD36CQ5JPF3 1778 aa24.01■■□□□ 1.43
USB1-213ENST00000566292 ANXA1P04083 346 aa24.01■■□□□ 1.43
USB1-213ENST00000566292 FSTL1Q12841 308 aa24.01■■□□□ 1.43
USB1-213ENST00000566292 GIGYF2Q6Y7W6 1299 aaKnown RBP24.01■■□□□ 1.43
USB1-213ENST00000566292 ZNF34Q8IZ26 560 aa24.01■■□□□ 1.43
USB1-213ENST00000566292 IBTKQ9P2D0 1353 aaPredicted RBP24.01■■□□□ 1.43
USB1-213ENST00000566292 POTECB2RU33 542 aa24■■□□□ 1.43
USB1-213ENST00000566292 CHL1O00533 1208 aa24■■□□□ 1.43
USB1-213ENST00000566292 KRT24Q2M2I5 525 aa24■■□□□ 1.43
USB1-213ENST00000566292 CCDC93Q567U6 631 aa24■■□□□ 1.43
USB1-213ENST00000566292 SUSD4Q5VX71 490 aa24■■□□□ 1.43
USB1-213ENST00000566292 OLFM4Q6UX06 510 aa24■■□□□ 1.43
USB1-213ENST00000566292 VEGFAP15692 232 aaPredicted RBP23.99■■□□□ 1.43
USB1-213ENST00000566292 CRY2Q49AN0 593 aa23.99■■□□□ 1.43
USB1-213ENST00000566292 RIC1Q4ADV7 1423 aa23.99■■□□□ 1.43
USB1-213ENST00000566292 NTSR2O95665 410 aa23.98■■□□□ 1.43
USB1-213ENST00000566292 DPY19L2Q6NUT2 758 aa23.98■■□□□ 1.43
USB1-213ENST00000566292 NECTIN2Q92692 538 aa23.98■■□□□ 1.43
USB1-213ENST00000566292 ALDH1B1P30837 517 aa23.97■■□□□ 1.43
USB1-213ENST00000566292 LAS1LQ9Y4W2 734 aaKnown RBP23.97■■□□□ 1.43
USB1-213ENST00000566292 DNAJC5GQ8N7S2 189 aa23.96■■□□□ 1.43
USB1-213ENST00000566292 SMC1BQ8NDV3 1235 aa23.96■■□□□ 1.43
USB1-213ENST00000566292 SNED1Q8TER0 1413 aa23.95■■□□□ 1.42
USB1-213ENST00000566292 FKBP4Q02790 459 aaKnown RBP eCLIP23.95■■□□□ 1.42
USB1-213ENST00000566292 LAMB2P55268 1798 aa23.94■■□□□ 1.42
USB1-213ENST00000566292 PARP10Q53GL7 1025 aa23.94■■□□□ 1.42
USB1-213ENST00000566292 COPS6Q7L5N1 327 aa23.94■■□□□ 1.42
USB1-213ENST00000566292 DDNO94850 711 aaPredicted RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms