RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 PROSER3Q2NL68 480 aa23.44■■□□□ 1.34
TRADD-205ENST00000566247 TTLL7Q6ZT98 887 aa23.44■■□□□ 1.34
TRADD-205ENST00000566247 WDR63Q8IWG1 891 aa23.44■■□□□ 1.34
TRADD-205ENST00000566247 ZBTB3Q9H5J0 574 aa23.44■■□□□ 1.34
TRADD-205ENST00000566247 WWC3Q9ULE0 1092 aa23.44■■□□□ 1.34
TRADD-205ENST00000566247 PXDNLA1KZ92 1463 aa23.43■■□□□ 1.34
TRADD-205ENST00000566247 DDX21Q9NR30 783 aaKnown RBP eCLIP23.43■■□□□ 1.34
TRADD-205ENST00000566247 CHPF2Q9P2E5 772 aa23.43■■□□□ 1.34
TRADD-205ENST00000566247 A0A0G2JLW4 131 aa23.42■■□□□ 1.34
TRADD-205ENST00000566247 ERVV-1B6SEH8 477 aa23.42■■□□□ 1.34
TRADD-205ENST00000566247 HLFQ16534 295 aa23.42■■□□□ 1.34
TRADD-205ENST00000566247 NIP7Q9Y221 180 aaKnown RBP eCLIP23.42■■□□□ 1.34
TRADD-205ENST00000566247 KIF13BQ9NQT8 1826 aa23.42■■□□□ 1.34
TRADD-205ENST00000566247 DPEP1P16444 411 aa23.41■■□□□ 1.34
TRADD-205ENST00000566247 AIMP1Q12904 312 aaKnown RBP23.41■■□□□ 1.34
TRADD-205ENST00000566247 C8orf58Q8NAV2 365 aa23.41■■□□□ 1.34
TRADD-205ENST00000566247 DBF4Q9UBU7 674 aaPredicted RBP23.41■■□□□ 1.34
TRADD-205ENST00000566247 LRP10Q7Z4F1 713 aa23.4■■□□□ 1.34
TRADD-205ENST00000566247 NBPF5PQ86XG9 351 aaPredicted RBP23.4■■□□□ 1.34
TRADD-205ENST00000566247 MIER1Q8N108 512 aa23.4■■□□□ 1.34
TRADD-205ENST00000566247 CNBD1Q8NA66 436 aa23.4■■□□□ 1.34
TRADD-205ENST00000566247 XAGE3Q8WTP9 111 aa23.4■■□□□ 1.34
TRADD-205ENST00000566247 CHMP4AQ9BY43 222 aa23.4■■□□□ 1.34
TRADD-205ENST00000566247 YBX3P16989 372 aaKnown RBP eCLIP23.39■■□□□ 1.33
TRADD-205ENST00000566247 COPS6Q7L5N1 327 aa23.39■■□□□ 1.33
TRADD-205ENST00000566247 NRXN2Q9P2S2 1712 aa23.39■■□□□ 1.33
TRADD-205ENST00000566247 AFDNP55196 1824 aaKnown RBP23.38■■□□□ 1.33
TRADD-205ENST00000566247 FANCIQ9NVI1 1328 aa23.38■■□□□ 1.33
TRADD-205ENST00000566247 GRIN3BO60391 1043 aa23.38■■□□□ 1.33
TRADD-205ENST00000566247 ST5P78524 1137 aa23.38■■□□□ 1.33
TRADD-205ENST00000566247 PRR5LQ6MZQ0 368 aa23.38■■□□□ 1.33
TRADD-205ENST00000566247 FAM177BA6PVY3 158 aa23.37■■□□□ 1.33
TRADD-205ENST00000566247 HYPKQ9NX55 129 aa23.37■■□□□ 1.33
TRADD-205ENST00000566247 CHRNA5P30532 468 aa23.36■■□□□ 1.33
TRADD-205ENST00000566247 CCDC30Q5VVM6 783 aa23.36■■□□□ 1.33
TRADD-205ENST00000566247 GIGYF2Q6Y7W6 1299 aaKnown RBP23.36■■□□□ 1.33
TRADD-205ENST00000566247 CCDC24Q8N4L8 307 aa23.36■■□□□ 1.33
TRADD-205ENST00000566247 TSPYL6Q8N831 410 aa23.36■■□□□ 1.33
TRADD-205ENST00000566247 MYH16Q9H6N6 1097 aa23.36■■□□□ 1.33
TRADD-205ENST00000566247 N4BP2Q86UW6 1770 aaPredicted RBP23.36■■□□□ 1.33
TRADD-205ENST00000566247 ATP10DQ9P241 1426 aa23.35■■□□□ 1.33
TRADD-205ENST00000566247 GPTP24298 496 aa23.35■■□□□ 1.33
TRADD-205ENST00000566247 GOLGA2Q08379 1002 aa23.35■■□□□ 1.33
TRADD-205ENST00000566247 TWISTNBQ3B726 338 aaPredicted RBP23.35■■□□□ 1.33
TRADD-205ENST00000566247 TPTE2Q6XPS3 522 aa23.35■■□□□ 1.33
TRADD-205ENST00000566247 BCS1LQ9Y276 419 aa23.35■■□□□ 1.33
TRADD-205ENST00000566247 KIAA1551Q9HCM1 1747 aa23.35■■□□□ 1.33
TRADD-205ENST00000566247 GTF2E1P29083 439 aaPredicted RBP23.34■■□□□ 1.33
TRADD-205ENST00000566247 C2CD5Q86YS7 1000 aa23.34■■□□□ 1.33
TRADD-205ENST00000566247 BRIP1Q9BX63 1249 aa23.34■■□□□ 1.33
TRADD-205ENST00000566247 PIM2Q9P1W9 311 aa23.34■■□□□ 1.33
TRADD-205ENST00000566247 H0YIN7 160 aa23.33■■□□□ 1.33
TRADD-205ENST00000566247 PDE6BP35913 854 aa23.33■■□□□ 1.33
TRADD-205ENST00000566247 NYXQ9GZU5 481 aa23.33■■□□□ 1.33
TRADD-205ENST00000566247 KCNA3P22001 575 aa23.32■■□□□ 1.32
TRADD-205ENST00000566247 HSP90AB3PQ58FF7 597 aa23.32■■□□□ 1.32
TRADD-205ENST00000566247 STK31Q9BXU1 1019 aa23.32■■□□□ 1.32
TRADD-205ENST00000566247 SPINK5Q9NQ38 1064 aaPredicted RBP23.31■■□□□ 1.32
TRADD-205ENST00000566247 PDZRN3Q9UPQ7 1066 aa23.31■■□□□ 1.32
TRADD-205ENST00000566247 NUP98P52948 1817 aa23.31■■□□□ 1.32
TRADD-205ENST00000566247 YY1P25490 414 aa23.3■■□□□ 1.32
TRADD-205ENST00000566247 EXOSC9Q06265 439 aaKnown RBP23.3■■□□□ 1.32
TRADD-205ENST00000566247 PARP10Q53GL7 1025 aa23.3■■□□□ 1.32
TRADD-205ENST00000566247 DALRD3Q5D0E6 543 aaKnown RBP23.3■■□□□ 1.32
TRADD-205ENST00000566247 ANKRD13DQ6ZTN6 518 aa23.3■■□□□ 1.32
TRADD-205ENST00000566247 ZNF34Q8IZ26 560 aa23.3■■□□□ 1.32
TRADD-205ENST00000566247 PLBD2Q8NHP8 589 aa23.3■■□□□ 1.32
TRADD-205ENST00000566247 UBN2Q6ZU65 1347 aa23.3■■□□□ 1.32
TRADD-205ENST00000566247 ZNF521Q96K83 1311 aa23.3■■□□□ 1.32
TRADD-205ENST00000566247 PPP1R42Q7Z4L9 355 aa23.29■■□□□ 1.32
TRADD-205ENST00000566247 TCERG1O14776 1098 aaKnown RBP23.28■■□□□ 1.32
TRADD-205ENST00000566247 ZNF622Q969S3 477 aaKnown RBP eCLIP23.28■■□□□ 1.32
TRADD-205ENST00000566247 PHAXQ9H814 394 aaKnown RBP23.28■■□□□ 1.32
TRADD-205ENST00000566247 IBTKQ9P2D0 1353 aaPredicted RBP23.27■■□□□ 1.32
TRADD-205ENST00000566247 TCIRG1Q13488 830 aa23.27■■□□□ 1.32
TRADD-205ENST00000566247 SUSD4Q5VX71 490 aa23.27■■□□□ 1.32
TRADD-205ENST00000566247 RIC3Q7Z5B4 369 aa23.27■■□□□ 1.32
TRADD-205ENST00000566247 NUTM1Q86Y26 1132 aa23.27■■□□□ 1.32
TRADD-205ENST00000566247 DDX58O95786 925 aaKnown RBP23.26■■□□□ 1.31
TRADD-205ENST00000566247 ANKRD31Q8N7Z5 1873 aa23.26■■□□□ 1.31
TRADD-205ENST00000566247 ERFEQ4G0M1 354 aa23.25■■□□□ 1.31
TRADD-205ENST00000566247 TTLL6Q8N841 843 aa23.25■■□□□ 1.31
TRADD-205ENST00000566247 UTP14AQ9BVJ6 771 aaKnown RBP23.25■■□□□ 1.31
TRADD-205ENST00000566247 E9PSI1 815 aa23.24■■□□□ 1.31
TRADD-205ENST00000566247 VAMP4O75379 141 aa23.24■■□□□ 1.31
TRADD-205ENST00000566247 NTSR2O95665 410 aa23.24■■□□□ 1.31
TRADD-205ENST00000566247 ABCC12Q96J65 1359 aa23.24■■□□□ 1.31
TRADD-205ENST00000566247 BRCA1P38398 1863 aaKnown RBP23.24■■□□□ 1.31
TRADD-205ENST00000566247 SLC4A2P04920 1241 aa23.23■■□□□ 1.31
TRADD-205ENST00000566247 ARHGAP27Q6ZUM4 889 aa23.23■■□□□ 1.31
TRADD-205ENST00000566247 NLRP10Q86W26 655 aa23.23■■□□□ 1.31
TRADD-205ENST00000566247 SRGNP10124 158 aa23.22■■□□□ 1.31
TRADD-205ENST00000566247 STYK1Q6J9G0 422 aa23.22■■□□□ 1.31
TRADD-205ENST00000566247 MASTLQ96GX5 879 aa23.22■■□□□ 1.31
TRADD-205ENST00000566247 ANKRD36CQ5JPF3 1778 aa23.22■■□□□ 1.31
TRADD-205ENST00000566247 DLEC1Q9Y238 1755 aa23.22■■□□□ 1.31
TRADD-205ENST00000566247 ATP5J2-PTCD1G3V325 749 aa23.21■■□□□ 1.31
TRADD-205ENST00000566247 CNKSR1Q969H4 720 aa23.21■■□□□ 1.31
TRADD-205ENST00000566247 TRMT112Q9UI30 125 aaKnown RBP23.21■■□□□ 1.31
TRADD-205ENST00000566247 RNF123Q5XPI4 1314 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms