RNA–Protein interactions for RNA: ENST00000566104.1

TRADD-204, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 669 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-204ENST00000566104 RUNDC1Q96C34 613 aa26.18■■□□□ 1.78
TRADD-204ENST00000566104 ARFGEF2Q9Y6D5 1785 aa26.18■■□□□ 1.78
TRADD-204ENST00000566104 ZNF526Q8TF50 670 aaPredicted RBP26.17■■□□□ 1.78
TRADD-204ENST00000566104 CCDC146Q8IYE0 955 aa26.16■■□□□ 1.78
TRADD-204ENST00000566104 ERBB4Q15303 1308 aa26.15■■□□□ 1.78
TRADD-204ENST00000566104 NBPF5PQ86XG9 351 aaPredicted RBP26.14■■□□□ 1.78
TRADD-204ENST00000566104 CCDC88AQ3V6T2 1871 aa26.13■■□□□ 1.77
TRADD-204ENST00000566104 NEUROD2Q15784 382 aa26.12■■□□□ 1.77
TRADD-204ENST00000566104 C9orf131Q5VYM1 1079 aa26.12■■□□□ 1.77
TRADD-204ENST00000566104 KIF6Q6ZMV9 814 aa26.12■■□□□ 1.77
TRADD-204ENST00000566104 ADAMTS8Q9UP79 889 aa26.12■■□□□ 1.77
TRADD-204ENST00000566104 NIP7Q9Y221 180 aaKnown RBP eCLIP26.12■■□□□ 1.77
TRADD-204ENST00000566104 RRP7AQ9Y3A4 280 aaKnown RBP26.12■■□□□ 1.77
TRADD-204ENST00000566104 ZNF622Q969S3 477 aaKnown RBP eCLIP26.11■■□□□ 1.77
TRADD-204ENST00000566104 ERVV-1B6SEH8 477 aa26.1■■□□□ 1.77
TRADD-204ENST00000566104 RNF181Q9P0P0 153 aa26.1■■□□□ 1.77
TRADD-204ENST00000566104 FER1L6Q2WGJ9 1857 aa26.1■■□□□ 1.77
TRADD-204ENST00000566104 TIAM2Q8IVF5 1701 aa26.09■■□□□ 1.77
TRADD-204ENST00000566104 TPTE2Q6XPS3 522 aa26.09■■□□□ 1.77
TRADD-204ENST00000566104 CCDC24Q8N4L8 307 aa26.09■■□□□ 1.77
TRADD-204ENST00000566104 MAP3K15Q6ZN16 1313 aa26.09■■□□□ 1.77
TRADD-204ENST00000566104 MYL6BP14649 208 aa26.08■■□□□ 1.77
TRADD-204ENST00000566104 NGEFQ8N5V2 710 aa26.08■■□□□ 1.77
TRADD-204ENST00000566104 TNRC6CQ9HCJ0 1690 aaKnown RBP26.08■■□□□ 1.77
TRADD-204ENST00000566104 SENP3-EIF4A1A0A087X0R7 540 aa26.07■■□□□ 1.76
TRADD-204ENST00000566104 STYK1Q6J9G0 422 aa26.07■■□□□ 1.76
TRADD-204ENST00000566104 CNKSR1Q969H4 720 aa26.07■■□□□ 1.76
TRADD-204ENST00000566104 ZC3H4Q9UPT8 1303 aaKnown RBP26.07■■□□□ 1.76
TRADD-204ENST00000566104 DICER1Q9UPY3 1922 aaKnown RBP26.06■■□□□ 1.76
TRADD-204ENST00000566104 HLFQ16534 295 aa26.06■■□□□ 1.76
TRADD-204ENST00000566104 TRIM35Q9UPQ4 493 aa26.06■■□□□ 1.76
TRADD-204ENST00000566104 SLX4Q8IY92 1834 aa26.06■■□□□ 1.76
TRADD-204ENST00000566104 SRGNP10124 158 aa26.05■■□□□ 1.76
TRADD-204ENST00000566104 MASTLQ96GX5 879 aa26.05■■□□□ 1.76
TRADD-204ENST00000566104 NYXQ9GZU5 481 aa26.05■■□□□ 1.76
TRADD-204ENST00000566104 ANKRD36CQ5JPF3 1778 aa26.05■■□□□ 1.76
TRADD-204ENST00000566104 LMNB1P20700 586 aa26.04■■□□□ 1.76
TRADD-204ENST00000566104 RASSF7Q02833 373 aa26.04■■□□□ 1.76
TRADD-204ENST00000566104 IBTKQ9P2D0 1353 aaPredicted RBP26.04■■□□□ 1.76
TRADD-204ENST00000566104 CHL1O00533 1208 aa26.03■■□□□ 1.76
TRADD-204ENST00000566104 EIF2S2P20042 333 aaKnown RBP26.03■■□□□ 1.76
TRADD-204ENST00000566104 GTF2E1P29083 439 aaPredicted RBP26.03■■□□□ 1.76
TRADD-204ENST00000566104 TTLL7Q6ZT98 887 aa26.03■■□□□ 1.76
TRADD-204ENST00000566104 KDM2BQ8NHM5 1336 aa26.03■■□□□ 1.76
TRADD-204ENST00000566104 KIF3CO14782 793 aa26.02■■□□□ 1.76
TRADD-204ENST00000566104 SOGA3Q5TF21 947 aa26.02■■□□□ 1.76
TRADD-204ENST00000566104 ZBTB3Q9H5J0 574 aa26.02■■□□□ 1.76
TRADD-204ENST00000566104 LAS1LQ9Y4W2 734 aaKnown RBP26.02■■□□□ 1.76
TRADD-204ENST00000566104 FAM177BA6PVY3 158 aa26.01■■□□□ 1.75
TRADD-204ENST00000566104 PRPF40BQ6NWY9 871 aaKnown RBP26.01■■□□□ 1.75
TRADD-204ENST00000566104 C21orf2O43822 256 aa26■■□□□ 1.75
TRADD-204ENST00000566104 NPR1P16066 1061 aa26■■□□□ 1.75
TRADD-204ENST00000566104 RIC1Q4ADV7 1423 aa25.99■■□□□ 1.75
TRADD-204ENST00000566104 KLRG2A4D1S0 409 aaPredicted RBP25.99■■□□□ 1.75
TRADD-204ENST00000566104 NFKBIEO00221 500 aa25.99■■□□□ 1.75
TRADD-204ENST00000566104 CALD1Q05682 793 aaKnown RBP25.99■■□□□ 1.75
TRADD-204ENST00000566104 GIGYF2Q6Y7W6 1299 aaKnown RBP25.99■■□□□ 1.75
TRADD-204ENST00000566104 HOXB7P09629 217 aa25.98■■□□□ 1.75
TRADD-204ENST00000566104 CFAP44Q96MT7 982 aa25.98■■□□□ 1.75
TRADD-204ENST00000566104 LTBP3Q9NS15 1303 aa25.97■■□□□ 1.75
TRADD-204ENST00000566104 ZNF316A6NFI3 1004 aaPredicted RBP25.97■■□□□ 1.75
TRADD-204ENST00000566104 PDIA6Q15084 440 aa25.97■■□□□ 1.75
TRADD-204ENST00000566104 LRP10Q7Z4F1 713 aa25.97■■□□□ 1.75
TRADD-204ENST00000566104 ZNF219Q9P2Y4 722 aaPredicted RBP25.97■■□□□ 1.75
TRADD-204ENST00000566104 APAF1O14727 1248 aa25.96■■□□□ 1.75
TRADD-204ENST00000566104 TAOK3Q9H2K8 898 aa25.96■■□□□ 1.75
TRADD-204ENST00000566104 NMRK2Q9NPI5 230 aa25.96■■□□□ 1.75
TRADD-204ENST00000566104 ABCC12Q96J65 1359 aa25.95■■□□□ 1.75
TRADD-204ENST00000566104 UBN2Q6ZU65 1347 aa25.95■■□□□ 1.75
TRADD-204ENST00000566104 GPTP24298 496 aa25.95■■□□□ 1.74
TRADD-204ENST00000566104 PARP10Q53GL7 1025 aa25.95■■□□□ 1.74
TRADD-204ENST00000566104 PPP1R42Q7Z4L9 355 aa25.95■■□□□ 1.74
TRADD-204ENST00000566104 ZNF34Q8IZ26 560 aa25.95■■□□□ 1.74
TRADD-204ENST00000566104 DDX21Q9NR30 783 aaKnown RBP eCLIP25.95■■□□□ 1.74
TRADD-204ENST00000566104 TOMM70O94826 608 aa25.94■■□□□ 1.74
TRADD-204ENST00000566104 PROSER3Q2NL68 480 aa25.94■■□□□ 1.74
TRADD-204ENST00000566104 C16orf71Q8IYS4 520 aaPredicted RBP25.94■■□□□ 1.74
TRADD-204ENST00000566104 NECTIN2Q92692 538 aa25.94■■□□□ 1.74
TRADD-204ENST00000566104 ALDH1B1P30837 517 aa25.93■■□□□ 1.74
TRADD-204ENST00000566104 PRELPP51888 382 aa25.93■■□□□ 1.74
TRADD-204ENST00000566104 KRT24Q2M2I5 525 aa25.93■■□□□ 1.74
TRADD-204ENST00000566104 CCDC93Q567U6 631 aa25.93■■□□□ 1.74
TRADD-204ENST00000566104 HSP90AB3PQ58FF7 597 aa25.93■■□□□ 1.74
TRADD-204ENST00000566104 HDGFL1Q5TGJ6 251 aa25.93■■□□□ 1.74
TRADD-204ENST00000566104 NUTM1Q86Y26 1132 aa25.93■■□□□ 1.74
TRADD-204ENST00000566104 ANXA1P04083 346 aa25.92■■□□□ 1.74
TRADD-204ENST00000566104 IFT57Q9NWB7 429 aa25.92■■□□□ 1.74
TRADD-204ENST00000566104 ANP32CO43423 234 aa25.91■■□□□ 1.74
TRADD-204ENST00000566104 HSPA6P17066 643 aa25.91■■□□□ 1.74
TRADD-204ENST00000566104 GNAI1P63096 354 aa25.91■■□□□ 1.74
TRADD-204ENST00000566104 CRY2Q49AN0 593 aa25.91■■□□□ 1.74
TRADD-204ENST00000566104 ERFEQ4G0M1 354 aa25.91■■□□□ 1.74
TRADD-204ENST00000566104 SUSD4Q5VX71 490 aa25.91■■□□□ 1.74
TRADD-204ENST00000566104 COPS6Q7L5N1 327 aa25.91■■□□□ 1.74
TRADD-204ENST00000566104 RNF123Q5XPI4 1314 aa25.9■■□□□ 1.74
TRADD-204ENST00000566104 GLTPD2A6NH11 291 aa25.9■■□□□ 1.74
TRADD-204ENST00000566104 NTSR2O95665 410 aa25.9■■□□□ 1.74
TRADD-204ENST00000566104 XAGE3Q8WTP9 111 aa25.9■■□□□ 1.74
TRADD-204ENST00000566104 MBIPQ9NS73 344 aa25.9■■□□□ 1.74
TRADD-204ENST00000566104 CHPF2Q9P2E5 772 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms