RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 VAT1LQ9HCJ6 419 aa15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 KIF20AO95235 890 aa15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 BAG4O95429 457 aaKnown RBP15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 CTNNA2P26232 953 aa15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 CCDC183Q5T5S1 534 aa15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 SSH1Q8WYL5 1049 aa15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 FEZ1Q99689 392 aa15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 TMX1Q9H3N1 280 aa15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 ZBTB3Q9H5J0 574 aa15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 NME9Q86XW9 330 aa15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 PDCL2Q8N4E4 241 aa15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 USP8P40818 1118 aa15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 LARP6Q9BRS8 491 aaKnown RBP15.75■□□□□ 0.11
CX3CL1-204ENST00000565912 CCDC184Q52MB2 194 aa15.74■□□□□ 0.11
CX3CL1-204ENST00000565912 KIF2AO00139 706 aaPredicted RBP15.74■□□□□ 0.11
CX3CL1-204ENST00000565912 USO1O60763 962 aaKnown RBP15.74■□□□□ 0.11
CX3CL1-204ENST00000565912 BCCIPQ9P287 314 aaKnown RBP eCLIP15.74■□□□□ 0.11
CX3CL1-204ENST00000565912 PRKCSHP14314 528 aaPredicted RBP15.74■□□□□ 0.11
CX3CL1-204ENST00000565912 TCERG1LQ5VWI1 586 aa15.74■□□□□ 0.11
CX3CL1-204ENST00000565912 CCDC144CPQ8IYA2 1237 aa15.74■□□□□ 0.11
CX3CL1-204ENST00000565912 CKAP2LQ8IYA6 745 aa15.74■□□□□ 0.11
CX3CL1-204ENST00000565912 MTIF2P46199 727 aaKnown RBP15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 FERMT2Q96AC1 680 aa15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 CLIP2Q9UDT6 1046 aa15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 SHTN1A0MZ66 631 aa15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 SLC4A8Q2Y0W8 1093 aa15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 NGLY1Q96IV0 654 aa15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 YEATS4O95619 227 aa15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 IDEP14735 1019 aa15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 PAFAH1B1P43034 410 aa15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 UBE4AQ14139 1066 aa15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 FOXO3O43524 673 aa15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 FBXO31Q5XUX0 539 aaPredicted RBP15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 MAP9Q49MG5 647 aa15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 HYPKQ9NX55 129 aa15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 COMMD10Q9Y6G5 202 aa15.73■□□□□ 0.11
CX3CL1-204ENST00000565912 CETN1Q12798 172 aa15.72■□□□□ 0.11
CX3CL1-204ENST00000565912 ALDH1L2Q3SY69 923 aa15.72■□□□□ 0.11
CX3CL1-204ENST00000565912 CCDC40Q4G0X9 1142 aa15.72■□□□□ 0.11
CX3CL1-204ENST00000565912 FSIP1Q8NA03 581 aa15.72■□□□□ 0.11
CX3CL1-204ENST00000565912 KIF18AQ8NI77 898 aa15.72■□□□□ 0.11
CX3CL1-204ENST00000565912 CALML4Q96GE6 196 aa15.72■□□□□ 0.11
CX3CL1-204ENST00000565912 EXOC5O00471 708 aa15.72■□□□□ 0.11
CX3CL1-204ENST00000565912 STAMBPO95630 424 aa15.72■□□□□ 0.11
CX3CL1-204ENST00000565912 LIMCH1Q9UPQ0 1083 aa15.72■□□□□ 0.11
CX3CL1-204ENST00000565912 GOLIM4O00461 696 aa15.72■□□□□ 0.11
CX3CL1-204ENST00000565912 PANK2Q9BZ23 570 aa15.72■□□□□ 0.11
CX3CL1-204ENST00000565912 SNRKQ9NRH2 765 aa15.72■□□□□ 0.11
CX3CL1-204ENST00000565912 DBF4Q9UBU7 674 aaPredicted RBP15.72■□□□□ 0.11
CX3CL1-204ENST00000565912 EMILIN1Q9Y6C2 1016 aa15.72■□□□□ 0.11
CX3CL1-204ENST00000565912 TMCO5BA8MYB1 307 aa15.71■□□□□ 0.11
CX3CL1-204ENST00000565912 BIN1O00499 593 aa15.71■□□□□ 0.11
CX3CL1-204ENST00000565912 TCP11L1Q9NUJ3 509 aa15.71■□□□□ 0.11
CX3CL1-204ENST00000565912 PHF8Q9UPP1 1060 aa15.71■□□□□ 0.11
CX3CL1-204ENST00000565912 SAMM50Q9Y512 469 aa15.71■□□□□ 0.11
CX3CL1-204ENST00000565912 PSMD1Q99460 953 aa15.71■□□□□ 0.11
CX3CL1-204ENST00000565912 ZSCAN30Q86W11 494 aa15.71■□□□□ 0.1
CX3CL1-204ENST00000565912 MAP3K1Q13233 1512 aa15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 RARSP54136 660 aaKnown RBP15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 TMEM67Q5HYA8 995 aa15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 FANCAO15360 1455 aa15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 TSPY2A6NKD2 308 aa15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 CABP5Q9NP86 173 aa15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 TRMT1Q9NXH9 659 aaKnown RBP15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 GCOM1H8Y6P7 765 aaPredicted RBP15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 MYZAPP0CAP1 466 aa15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 LDHAL6AQ6ZMR3 332 aa15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 CCDC12Q8WUD4 166 aaPredicted RBP15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 SPECC1Q5M775 1068 aa15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 DRC1Q96MC2 740 aa15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 KAT14Q9H8E8 782 aa15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 PUF60Q9UHX1 559 aaKnown RBP15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 CTAGE5O15320 804 aa15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 PRC1O43663 620 aa15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 SYCP3Q8IZU3 236 aa15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 USP16Q9Y5T5 823 aa15.7■□□□□ 0.1
CX3CL1-204ENST00000565912 IARSP41252 1262 aaKnown RBP15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 CEBPAP49715 358 aaPredicted RBP15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 AMPD3Q01432 767 aa15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 PRPF4BQ13523 1007 aaKnown RBP15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 RAB11FIP4Q86YS3 637 aa15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 TFIP11Q9UBB9 837 aaKnown RBP15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 MAP3K2Q9Y2U5 619 aa15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 LDHCP07864 332 aa15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 MCM3P25205 808 aa15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 HAND2P61296 217 aa15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 ATP5J2-PTCD1G3V325 749 aa15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 KIF5BP33176 963 aa15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 SMC1AQ14683 1233 aaKnown RBP15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 NCOA1Q15788 1441 aa15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 PPFIA3O75145 1194 aa15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 DDX46Q7L014 1031 aaKnown RBP15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 EVI5LQ96CN4 794 aa15.69■□□□□ 0.1
CX3CL1-204ENST00000565912 NF2P35240 595 aa15.68■□□□□ 0.1
CX3CL1-204ENST00000565912 HLTFQ14527 1009 aaKnown RBP eCLIP15.68■□□□□ 0.1
CX3CL1-204ENST00000565912 PDE4BQ07343 736 aa15.68■□□□□ 0.1
CX3CL1-204ENST00000565912 TTF1Q15361 905 aaPredicted RBP15.68■□□□□ 0.1
CX3CL1-204ENST00000565912 ZNF622Q969S3 477 aaKnown RBP eCLIP15.68■□□□□ 0.1
CX3CL1-204ENST00000565912 CDC5LQ99459 802 aaKnown RBP15.68■□□□□ 0.1
CX3CL1-204ENST00000565912 BAG3O95817 575 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms