RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 ZNF330Q9Y3S2 320 aaPredicted RBP19.52■□□□□ 0.72
KNOP1-203ENST00000565844 YBX3P16989 372 aaKnown RBP eCLIP19.5■□□□□ 0.712e-6■■■□□ 16.2
KNOP1-203ENST00000565844 KIF16BQ96L93 1317 aa19.5■□□□□ 0.71
KNOP1-203ENST00000565844 IL6STP40189 918 aaPredicted RBP19.49■□□□□ 0.71
KNOP1-203ENST00000565844 G2E3Q7L622 706 aa19.49■□□□□ 0.71
KNOP1-203ENST00000565844 LRP10Q7Z4F1 713 aa19.49■□□□□ 0.71
KNOP1-203ENST00000565844 PHAXQ9H814 394 aaKnown RBP19.49■□□□□ 0.71
KNOP1-203ENST00000565844 COL15A1P39059 1388 aa19.48■□□□□ 0.71
KNOP1-203ENST00000565844 N4BP2Q86UW6 1770 aaPredicted RBP19.48■□□□□ 0.71
KNOP1-203ENST00000565844 ARFGEF2Q9Y6D5 1785 aa19.48■□□□□ 0.71
KNOP1-203ENST00000565844 RPS6KA4O75676 772 aa19.48■□□□□ 0.71
KNOP1-203ENST00000565844 BRPF1P55201 1214 aaPredicted RBP19.48■□□□□ 0.71
KNOP1-203ENST00000565844 AIMP1Q12904 312 aaKnown RBP19.48■□□□□ 0.71
KNOP1-203ENST00000565844 NPM2Q86SE8 214 aaKnown RBP19.48■□□□□ 0.71
KNOP1-203ENST00000565844 ZNF784Q8NCA9 323 aaPredicted RBP19.48■□□□□ 0.71
KNOP1-203ENST00000565844 FRAT1Q92837 279 aaPredicted RBP19.48■□□□□ 0.71
KNOP1-203ENST00000565844 RTCBQ9Y3I0 505 aaKnown RBP19.48■□□□□ 0.71
KNOP1-203ENST00000565844 EIF5P55010 431 aaKnown RBP19.47■□□□□ 0.71
KNOP1-203ENST00000565844 FLIIQ13045 1269 aa19.47■□□□□ 0.71
KNOP1-203ENST00000565844 XAGE3Q8WTP9 111 aa19.47■□□□□ 0.71
KNOP1-203ENST00000565844 BCORQ6W2J9 1755 aa19.47■□□□□ 0.71
KNOP1-203ENST00000565844 COPS6Q7L5N1 327 aa19.46■□□□□ 0.71
KNOP1-203ENST00000565844 NOB1Q9ULX3 412 aaKnown RBP19.46■□□□□ 0.71
KNOP1-203ENST00000565844 SCN7AQ01118 1682 aa19.46■□□□□ 0.71
KNOP1-203ENST00000565844 FKBP5Q13451 457 aaPredicted RBP19.45■□□□□ 0.7
KNOP1-203ENST00000565844 TRAPPC3LQ5T215 181 aa19.45■□□□□ 0.7
KNOP1-203ENST00000565844 ARHGEF1Q92888 912 aaKnown RBP19.45■□□□□ 0.7
KNOP1-203ENST00000565844 PTPRCP08575 1304 aa19.45■□□□□ 0.7
KNOP1-203ENST00000565844 MMP10P09238 476 aa19.44■□□□□ 0.7
KNOP1-203ENST00000565844 KIF6Q6ZMV9 814 aa19.44■□□□□ 0.7
KNOP1-203ENST00000565844 CD2APQ9Y5K6 639 aa19.44■□□□□ 0.7
KNOP1-203ENST00000565844 A0A087WZG4 1122 aa19.44■□□□□ 0.7
KNOP1-203ENST00000565844 IPO8O15397 1037 aaKnown RBP19.44■□□□□ 0.7
KNOP1-203ENST00000565844 DDX58O95786 925 aaKnown RBP19.44■□□□□ 0.7
KNOP1-203ENST00000565844 TTLL7Q6ZT98 887 aa19.44■□□□□ 0.7
KNOP1-203ENST00000565844 DZIP3Q86Y13 1208 aaKnown RBP19.44■□□□□ 0.7
KNOP1-203ENST00000565844 ANKRD36CQ5JPF3 1778 aa19.43■□□□□ 0.7
KNOP1-203ENST00000565844 NUP98P52948 1817 aa19.43■□□□□ 0.7
KNOP1-203ENST00000565844 KIF13BQ9NQT8 1826 aa19.43■□□□□ 0.7
KNOP1-203ENST00000565844 ADRA2BP18089 450 aa19.43■□□□□ 0.7
KNOP1-203ENST00000565844 ZKSCAN2Q63HK3 967 aa19.43■□□□□ 0.7
KNOP1-203ENST00000565844 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.43■□□□□ 0.7
KNOP1-203ENST00000565844 TBC1D2BQ9UPU7 963 aa19.43■□□□□ 0.7
KNOP1-203ENST00000565844 SUPT16HQ9Y5B9 1047 aaKnown RBP19.43■□□□□ 0.7
KNOP1-203ENST00000565844 KIAA1551Q9HCM1 1747 aa19.42■□□□□ 0.7
KNOP1-203ENST00000565844 PLIN1O60240 522 aa19.42■□□□□ 0.7
KNOP1-203ENST00000565844 RFC4P35249 363 aa19.42■□□□□ 0.7
KNOP1-203ENST00000565844 RRP1P56182 461 aaKnown RBP19.42■□□□□ 0.7
KNOP1-203ENST00000565844 ARHGAP45Q92619 1136 aa19.42■□□□□ 0.7
KNOP1-203ENST00000565844 ZBTB3Q9H5J0 574 aa19.42■□□□□ 0.7
KNOP1-203ENST00000565844 SRP68Q9UHB9 627 aaKnown RBP19.42■□□□□ 0.7
KNOP1-203ENST00000565844 ADCY9O60503 1353 aa19.42■□□□□ 0.7
KNOP1-203ENST00000565844 ATF7IPQ6VMQ6 1270 aa19.41■□□□□ 0.7
KNOP1-203ENST00000565844 ANKRD13DQ6ZTN6 518 aa19.41■□□□□ 0.7
KNOP1-203ENST00000565844 PLBD2Q8NHP8 589 aa19.41■□□□□ 0.7
KNOP1-203ENST00000565844 API5Q9BZZ5 524 aaKnown RBP19.41■□□□□ 0.7
KNOP1-203ENST00000565844 MAP3K15Q6ZN16 1313 aa19.41■□□□□ 0.7
KNOP1-203ENST00000565844 AFDNP55196 1824 aaKnown RBP19.4■□□□□ 0.7
KNOP1-203ENST00000565844 PI4KAP2A4QPH2 592 aa19.4■□□□□ 0.7
KNOP1-203ENST00000565844 GYS1P13807 737 aa19.4■□□□□ 0.7
KNOP1-203ENST00000565844 TRIM27P14373 513 aa19.4■□□□□ 0.7
KNOP1-203ENST00000565844 KSR2Q6VAB6 950 aa19.4■□□□□ 0.7
KNOP1-203ENST00000565844 RIC3Q7Z5B4 369 aa19.4■□□□□ 0.7
KNOP1-203ENST00000565844 PI4KAP1Q8N8J0 262 aa19.4■□□□□ 0.7
KNOP1-203ENST00000565844 MAP3K2Q9Y2U5 619 aa19.4■□□□□ 0.7
KNOP1-203ENST00000565844 F6X3S4 739 aa19.39■□□□□ 0.69
KNOP1-203ENST00000565844 PXDNLA1KZ92 1463 aa19.38■□□□□ 0.69
KNOP1-203ENST00000565844 RNF123Q5XPI4 1314 aa19.38■□□□□ 0.69
KNOP1-203ENST00000565844 USP42Q9H9J4 1324 aaKnown RBP19.38■□□□□ 0.69
KNOP1-203ENST00000565844 ZPR1O75312 459 aa19.38■□□□□ 0.69
KNOP1-203ENST00000565844 CLUAP1Q96AJ1 413 aa19.38■□□□□ 0.69
KNOP1-203ENST00000565844 NARFQ9UHQ1 456 aa19.38■□□□□ 0.69
KNOP1-203ENST00000565844 TNNQ9UQP3 1299 aa19.38■□□□□ 0.69
KNOP1-203ENST00000565844 ERVV-1B6SEH8 477 aa19.37■□□□□ 0.69
KNOP1-203ENST00000565844 GRIN3BO60391 1043 aa19.37■□□□□ 0.69
KNOP1-203ENST00000565844 CAMTA2O94983 1202 aa19.37■□□□□ 0.69
KNOP1-203ENST00000565844 FTSJ3Q8IY81 847 aaKnown RBP19.37■□□□□ 0.69
KNOP1-203ENST00000565844 DNAAF4Q8WXU2 420 aa19.37■□□□□ 0.69
KNOP1-203ENST00000565844 ABCC4O15439 1325 aa19.36■□□□□ 0.69
KNOP1-203ENST00000565844 USPL1Q5W0Q7 1092 aa19.36■□□□□ 0.69
KNOP1-203ENST00000565844 SLC4A10Q6U841 1118 aa19.36■□□□□ 0.69
KNOP1-203ENST00000565844 NLGN1Q8N2Q7 840 aa19.36■□□□□ 0.69
KNOP1-203ENST00000565844 BRCA1P38398 1863 aaKnown RBP19.36■□□□□ 0.69
KNOP1-203ENST00000565844 HLFQ16534 295 aa19.35■□□□□ 0.69
KNOP1-203ENST00000565844 GIGYF2Q6Y7W6 1299 aaKnown RBP19.35■□□□□ 0.69
KNOP1-203ENST00000565844 DZIP1LQ8IYY4 767 aaKnown RBP19.35■□□□□ 0.69
KNOP1-203ENST00000565844 ZNF652Q9Y2D9 606 aa19.35■□□□□ 0.69
KNOP1-203ENST00000565844 MS4A1P11836 297 aa19.34■□□□□ 0.69
KNOP1-203ENST00000565844 FKBP8Q14318 412 aa19.34■□□□□ 0.69
KNOP1-203ENST00000565844 METTL22Q9BUU2 404 aaPredicted RBP19.34■□□□□ 0.69
KNOP1-203ENST00000565844 PARP3Q9Y6F1 533 aa19.34■□□□□ 0.69
KNOP1-203ENST00000565844 C10orf71Q711Q0 1435 aa19.34■□□□□ 0.69
KNOP1-203ENST00000565844 A0A0G2JLW4 131 aa19.33■□□□□ 0.69
KNOP1-203ENST00000565844 NEXNQ0ZGT2 675 aa19.33■□□□□ 0.69
KNOP1-203ENST00000565844 C20orf194Q5TEA3 1177 aa19.33■□□□□ 0.69
KNOP1-203ENST00000565844 PANK1Q8TE04 598 aa19.33■□□□□ 0.69
KNOP1-203ENST00000565844 MYD88Q99836 296 aa19.33■□□□□ 0.69
KNOP1-203ENST00000565844 ATP10DQ9P241 1426 aa19.33■□□□□ 0.69
KNOP1-203ENST00000565844 RGL2O15211 777 aa19.32■□□□□ 0.68
KNOP1-203ENST00000565844 RLBP1P12271 317 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms