RNA–Protein interactions for RNA: ENST00000565704.5

GDPD3-203, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 2

Gene GDPD3, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-203ENST00000565704 AMIGO3Q86WK7 504 aa17.32■□□□□ 0.36
GDPD3-203ENST00000565704 FTSJ3Q8IY81 847 aaKnown RBP17.32■□□□□ 0.36
GDPD3-203ENST00000565704 METTL22Q9BUU2 404 aaPredicted RBP17.32■□□□□ 0.36
GDPD3-203ENST00000565704 MAP3K2Q9Y2U5 619 aa17.32■□□□□ 0.36
GDPD3-203ENST00000565704 ERVV-1B6SEH8 477 aa17.31■□□□□ 0.36
GDPD3-203ENST00000565704 RGL2O15211 777 aa17.31■□□□□ 0.36
GDPD3-203ENST00000565704 IGKV5-2P06315 115 aa17.31■□□□□ 0.36
GDPD3-203ENST00000565704 HMGB2P26583 209 aaKnown RBP17.31■□□□□ 0.36
GDPD3-203ENST00000565704 AAMPQ13685 434 aa17.31■□□□□ 0.36
GDPD3-203ENST00000565704 ZBTB40Q9NUA8 1239 aa17.31■□□□□ 0.36
GDPD3-203ENST00000565704 C4BP0C0L5 1744 aa17.3■□□□□ 0.36
GDPD3-203ENST00000565704 MAP3K15Q6ZN16 1313 aa17.3■□□□□ 0.36
GDPD3-203ENST00000565704 CCDC125Q86Z20 511 aa17.3■□□□□ 0.36
GDPD3-203ENST00000565704 DDX19BQ9UMR2 479 aa17.3■□□□□ 0.36
GDPD3-203ENST00000565704 N4BP2Q86UW6 1770 aaPredicted RBP17.3■□□□□ 0.36
GDPD3-203ENST00000565704 ALDH1L1O75891 902 aa17.29■□□□□ 0.36
GDPD3-203ENST00000565704 TRIM28Q13263 835 aaKnown RBP17.29■□□□□ 0.36
GDPD3-203ENST00000565704 LINS1Q8NG48 757 aa17.29■□□□□ 0.36
GDPD3-203ENST00000565704 AKT1S1Q96B36 256 aa17.29■□□□□ 0.36
GDPD3-203ENST00000565704 NUP188Q5SRE5 1749 aa17.29■□□□□ 0.36
GDPD3-203ENST00000565704 CAMTA2O94983 1202 aa17.28■□□□□ 0.36
GDPD3-203ENST00000565704 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
GDPD3-203ENST00000565704 ISCA1Q9BUE6 129 aa17.28■□□□□ 0.36
GDPD3-203ENST00000565704 USP44Q9H0E7 712 aa17.28■□□□□ 0.36
GDPD3-203ENST00000565704 UTYO14607 1347 aa17.27■□□□□ 0.36
GDPD3-203ENST00000565704 A0A087WZG4 1122 aa17.27■□□□□ 0.36
GDPD3-203ENST00000565704 TCIRG1Q13488 830 aa17.27■□□□□ 0.36
GDPD3-203ENST00000565704 HLFQ16534 295 aa17.27■□□□□ 0.36
GDPD3-203ENST00000565704 SLC4A10Q6U841 1118 aa17.27■□□□□ 0.36
GDPD3-203ENST00000565704 GIGYF2Q6Y7W6 1299 aaKnown RBP17.27■□□□□ 0.36
GDPD3-203ENST00000565704 ITPRIPQ8IWB1 547 aa17.27■□□□□ 0.36
GDPD3-203ENST00000565704 SRCIN1Q9C0H9 1055 aa17.27■□□□□ 0.36
GDPD3-203ENST00000565704 COL15A1P39059 1388 aa17.27■□□□□ 0.35
GDPD3-203ENST00000565704 EN1Q05925 392 aaPredicted RBP17.26■□□□□ 0.35
GDPD3-203ENST00000565704 EZH2Q15910 746 aaKnown RBP17.26■□□□□ 0.35
GDPD3-203ENST00000565704 DZIP3Q86Y13 1208 aaKnown RBP17.26■□□□□ 0.35
GDPD3-203ENST00000565704 TBC1D2BQ9UPU7 963 aa17.26■□□□□ 0.35
GDPD3-203ENST00000565704 ARFGEF2Q9Y6D5 1785 aa17.25■□□□□ 0.35
GDPD3-203ENST00000565704 NEURL1BA8MQ27 555 aa17.25■□□□□ 0.35
GDPD3-203ENST00000565704 GNPATO15228 680 aa17.25■□□□□ 0.35
GDPD3-203ENST00000565704 ADRA2BP18089 450 aa17.25■□□□□ 0.35
GDPD3-203ENST00000565704 KIF6Q6ZMV9 814 aa17.25■□□□□ 0.35
GDPD3-203ENST00000565704 SMIM5Q71RC9 77 aa17.25■□□□□ 0.35
GDPD3-203ENST00000565704 ZNF34Q8IZ26 560 aa17.25■□□□□ 0.35
GDPD3-203ENST00000565704 ARHGEF1Q92888 912 aaKnown RBP17.25■□□□□ 0.35
GDPD3-203ENST00000565704 ZBTB3Q9H5J0 574 aa17.25■□□□□ 0.35
GDPD3-203ENST00000565704 BCL2L12Q9HB09 334 aa17.25■□□□□ 0.35
GDPD3-203ENST00000565704 RTCBQ9Y3I0 505 aaKnown RBP17.25■□□□□ 0.35
GDPD3-203ENST00000565704 SSFA2P28290 1259 aa17.24■□□□□ 0.35
GDPD3-203ENST00000565704 ZNF827Q17R98 1081 aa17.24■□□□□ 0.35
GDPD3-203ENST00000565704 CWF19L2Q2TBE0 894 aaKnown RBP17.24■□□□□ 0.35
GDPD3-203ENST00000565704 CLEC4GQ6UXB4 293 aa17.24■□□□□ 0.35
GDPD3-203ENST00000565704 MEIS3Q99687 375 aa17.24■□□□□ 0.35
GDPD3-203ENST00000565704 MYD88Q99836 296 aa17.24■□□□□ 0.35
GDPD3-203ENST00000565704 CHMP4BQ9H444 224 aaKnown RBP17.24■□□□□ 0.35
GDPD3-203ENST00000565704 PPP4R2Q9NY27 417 aa17.24■□□□□ 0.35
GDPD3-203ENST00000565704 NARFQ9UHQ1 456 aa17.24■□□□□ 0.35
GDPD3-203ENST00000565704 PCDHB15Q9Y5E8 787 aa17.24■□□□□ 0.35
GDPD3-203ENST00000565704 UBR3Q6ZT12 1888 aa17.24■□□□□ 0.35
GDPD3-203ENST00000565704 BAG6P46379 1132 aa17.23■□□□□ 0.35
GDPD3-203ENST00000565704 CASP7P55210 303 aa17.23■□□□□ 0.35
GDPD3-203ENST00000565704 GCKRQ14397 625 aa17.23■□□□□ 0.35
GDPD3-203ENST00000565704 DEFB132Q7Z7B7 95 aa17.23■□□□□ 0.35
GDPD3-203ENST00000565704 NEXNQ0ZGT2 675 aa17.22■□□□□ 0.35
GDPD3-203ENST00000565704 TRAPPC3LQ5T215 181 aa17.22■□□□□ 0.35
GDPD3-203ENST00000565704 CCDC191Q8NCU4 936 aa17.22■□□□□ 0.35
GDPD3-203ENST00000565704 UPF1Q92900 1129 aaKnown RBP eCLIP17.22■□□□□ 0.35
GDPD3-203ENST00000565704 AK7Q96M32 723 aa17.22■□□□□ 0.35
GDPD3-203ENST00000565704 ZNF330Q9Y3S2 320 aaPredicted RBP17.22■□□□□ 0.35
GDPD3-203ENST00000565704 ATP5J2-PTCD1G3V325 749 aa17.21■□□□□ 0.35
GDPD3-203ENST00000565704 H7C1W4 665 aa17.21■□□□□ 0.35
GDPD3-203ENST00000565704 NBPF7P0C2Y1 421 aaPredicted RBP17.21■□□□□ 0.35
GDPD3-203ENST00000565704 HSP90AB3PQ58FF7 597 aa17.21■□□□□ 0.35
GDPD3-203ENST00000565704 NUP98P52948 1817 aa17.21■□□□□ 0.35
GDPD3-203ENST00000565704 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.34
GDPD3-203ENST00000565704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.2■□□□□ 0.34
GDPD3-203ENST00000565704 GRM8O00222 908 aa17.2■□□□□ 0.34
GDPD3-203ENST00000565704 GNAI3P08754 354 aa17.2■□□□□ 0.34
GDPD3-203ENST00000565704 SF3B2Q13435 895 aaKnown RBP17.2■□□□□ 0.34
GDPD3-203ENST00000565704 NLRP10Q86W26 655 aa17.2■□□□□ 0.34
GDPD3-203ENST00000565704 KAZALD1Q96I82 304 aa17.2■□□□□ 0.34
GDPD3-203ENST00000565704 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
GDPD3-203ENST00000565704 SIRT2Q8IXJ6 389 aa17.19■□□□□ 0.34
GDPD3-203ENST00000565704 ANO8Q9HCE9 1232 aaPredicted RBP17.19■□□□□ 0.34
GDPD3-203ENST00000565704 SRP68Q9UHB9 627 aaKnown RBP17.19■□□□□ 0.34
GDPD3-203ENST00000565704 UBN2Q6ZU65 1347 aa17.19■□□□□ 0.34
GDPD3-203ENST00000565704 NPM2Q86SE8 214 aaKnown RBP17.18■□□□□ 0.34
GDPD3-203ENST00000565704 CWC25Q9NXE8 425 aaPredicted RBP17.18■□□□□ 0.34
GDPD3-203ENST00000565704 SCN7AQ01118 1682 aa17.17■□□□□ 0.34
GDPD3-203ENST00000565704 GNAI2P04899 355 aa17.17■□□□□ 0.34
GDPD3-203ENST00000565704 C4AP0C0L4 1744 aa17.17■□□□□ 0.34
GDPD3-203ENST00000565704 SLC15A2Q16348 729 aa17.17■□□□□ 0.34
GDPD3-203ENST00000565704 USPL1Q5W0Q7 1092 aa17.17■□□□□ 0.34
GDPD3-203ENST00000565704 COL23A1Q86Y22 540 aaPredicted RBP17.17■□□□□ 0.34
GDPD3-203ENST00000565704 ANKRD36CQ5JPF3 1778 aa17.16■□□□□ 0.34
GDPD3-203ENST00000565704 GYS1P13807 737 aa17.16■□□□□ 0.34
GDPD3-203ENST00000565704 RFC4P35249 363 aa17.16■□□□□ 0.34
GDPD3-203ENST00000565704 HDAC1Q13547 482 aaPredicted RBP17.16■□□□□ 0.34
GDPD3-203ENST00000565704 ILDR2Q71H61 639 aa17.16■□□□□ 0.34
GDPD3-203ENST00000565704 ANKRD44Q8N8A2 993 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms