RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-229ENST00000565580 PLEKHO1Q53GL0 409 aaPredicted RBP8.69□□□□□ -1.02
TCF4-229ENST00000565580 SULT6B1Q6IMI4 303 aa8.69□□□□□ -1.02
TCF4-229ENST00000565580 ZNF530Q6P9A1 599 aaPredicted RBP8.69□□□□□ -1.02
TCF4-229ENST00000565580 FLAD1Q8NFF5 587 aa8.69□□□□□ -1.02
TCF4-229ENST00000565580 SLC4A9Q96Q91 983 aa8.69□□□□□ -1.02
TCF4-229ENST00000565580 KCNK17Q96T54 332 aa8.69□□□□□ -1.02
TCF4-229ENST00000565580 SLC4A5Q9BY07 1137 aa8.69□□□□□ -1.02
TCF4-229ENST00000565580 KDRP35968 1356 aa8.69□□□□□ -1.02
TCF4-229ENST00000565580 ERVV-2B6SEH9 535 aa8.68□□□□□ -1.02
TCF4-229ENST00000565580 PDE4AP27815 886 aa8.68□□□□□ -1.02
TCF4-229ENST00000565580 ATP6V1AP38606 617 aa8.68□□□□□ -1.02
TCF4-229ENST00000565580 ZNF784Q8NCA9 323 aaPredicted RBP8.68□□□□□ -1.02
TCF4-229ENST00000565580 KCTD12Q96CX2 325 aaKnown RBP8.68□□□□□ -1.02
TCF4-229ENST00000565580 DCAF5Q96JK2 942 aa8.68□□□□□ -1.02
TCF4-229ENST00000565580 GNPATO15228 680 aa8.67□□□□□ -1.02
TCF4-229ENST00000565580 HSP90AB1P08238 724 aaKnown RBP8.67□□□□□ -1.02
TCF4-229ENST00000565580 YBX3P16989 372 aaKnown RBP eCLIP8.67□□□□□ -1.02
TCF4-229ENST00000565580 SSFA2P28290 1259 aa8.67□□□□□ -1.02
TCF4-229ENST00000565580 MTHFSP49914 203 aa8.67□□□□□ -1.02
TCF4-229ENST00000565580 CHD4Q14839 1912 aa8.67□□□□□ -1.02
TCF4-229ENST00000565580 AMOTQ4VCS5 1084 aa8.67□□□□□ -1.02
TCF4-229ENST00000565580 CC2D1BQ5T0F9 858 aaKnown RBP8.67□□□□□ -1.02
TCF4-229ENST00000565580 CRISPLD2Q9H0B8 497 aa8.67□□□□□ -1.02
TCF4-229ENST00000565580 HMGB2P26583 209 aaKnown RBP8.66□□□□□ -1.02
TCF4-229ENST00000565580 CABP4P57796 275 aa8.66□□□□□ -1.02
TCF4-229ENST00000565580 PPP1R15BQ5SWA1 713 aa8.66□□□□□ -1.02
TCF4-229ENST00000565580 ZNF454Q8N9F8 522 aa8.66□□□□□ -1.02
TCF4-229ENST00000565580 BCL2L12Q9HB09 334 aa8.66□□□□□ -1.02
TCF4-229ENST00000565580 VPS9D1Q9Y2B5 631 aa8.66□□□□□ -1.02
TCF4-229ENST00000565580 HMOX1P09601 288 aa8.65□□□□□ -1.02
TCF4-229ENST00000565580 PTPREP23469 700 aa8.65□□□□□ -1.02
TCF4-229ENST00000565580 CNGB1Q14028 1251 aaPredicted RBP8.65□□□□□ -1.02
TCF4-229ENST00000565580 C1orf141Q5JVX7 400 aa8.65□□□□□ -1.02
TCF4-229ENST00000565580 NFATC2IPQ8NCF5 419 aa8.65□□□□□ -1.02
TCF4-229ENST00000565580 CD2APQ9Y5K6 639 aa8.65□□□□□ -1.02
TCF4-229ENST00000565580 COL5A3P25940 1745 aaPredicted RBP8.65□□□□□ -1.03
TCF4-229ENST00000565580 ZNF831Q5JPB2 1677 aa8.65□□□□□ -1.03
TCF4-229ENST00000565580 PTCD1O75127 700 aaKnown RBP8.64□□□□□ -1.03
TCF4-229ENST00000565580 LGR6Q9HBX8 967 aa8.64□□□□□ -1.03
TCF4-229ENST00000565580 WWC3Q9ULE0 1092 aa8.64□□□□□ -1.03
TCF4-229ENST00000565580 COL3A1P02461 1466 aaPredicted RBP8.64□□□□□ -1.03
TCF4-229ENST00000565580 SCN11AQ9UI33 1791 aa8.63□□□□□ -1.03
TCF4-229ENST00000565580 CNTNAP4Q9C0A0 1308 aa8.63□□□□□ -1.03
TCF4-229ENST00000565580 MYH14Q7Z406 1995 aaKnown RBP8.63□□□□□ -1.03
TCF4-229ENST00000565580 GOLGA8CPA6NN73 597 aa8.63□□□□□ -1.03
TCF4-229ENST00000565580 MMP10P09238 476 aa8.63□□□□□ -1.03
TCF4-229ENST00000565580 AKAP4Q5JQC9 854 aa8.63□□□□□ -1.03
TCF4-229ENST00000565580 TRAPPC3LQ5T215 181 aa8.63□□□□□ -1.03
TCF4-229ENST00000565580 RC3H1Q5TC82 1133 aaKnown RBP8.63□□□□□ -1.03
TCF4-229ENST00000565580 ARHGEF1Q92888 912 aaKnown RBP8.63□□□□□ -1.03
TCF4-229ENST00000565580 RTCBQ9Y3I0 505 aaKnown RBP8.63□□□□□ -1.03
TCF4-229ENST00000565580 NPC1L1Q9UHC9 1359 aa8.62□□□□□ -1.03
TCF4-229ENST00000565580 SENP3-EIF4A1A0A087X0R7 540 aa8.62□□□□□ -1.03
TCF4-229ENST00000565580 GRIN3BO60391 1043 aa8.62□□□□□ -1.03
TCF4-229ENST00000565580 DIAPH1O60610 1272 aaKnown RBP8.62□□□□□ -1.03
TCF4-229ENST00000565580 RPS6KA4O75676 772 aa8.62□□□□□ -1.03
TCF4-229ENST00000565580 CRKLP46109 303 aaKnown RBP8.62□□□□□ -1.03
TCF4-229ENST00000565580 FOSBP53539 338 aa8.62□□□□□ -1.03
TCF4-229ENST00000565580 MTHFSDQ2M296 383 aaKnown RBP8.62□□□□□ -1.03
TCF4-229ENST00000565580 SLC52A2Q9HAB3 445 aa8.62□□□□□ -1.03
TCF4-229ENST00000565580 TJP1Q07157 1748 aa8.62□□□□□ -1.03
TCF4-229ENST00000565580 MRC1P22897 1456 aa8.62□□□□□ -1.03
TCF4-229ENST00000565580 RNMTO43148 476 aaKnown RBP8.61□□□□□ -1.03
TCF4-229ENST00000565580 RGS20O76081 388 aa8.61□□□□□ -1.03
TCF4-229ENST00000565580 GYS1P13807 737 aa8.61□□□□□ -1.03
TCF4-229ENST00000565580 SLC39A6Q13433 755 aa8.61□□□□□ -1.03
TCF4-229ENST00000565580 CICQ96RK0 1608 aaPredicted RBP8.61□□□□□ -1.03
TCF4-229ENST00000565580 C4AP0C0L4 1744 aa8.6□□□□□ -1.03
TCF4-229ENST00000565580 ADAMTS7Q9UKP4 1686 aa8.6□□□□□ -1.03
TCF4-229ENST00000565580 PXDNLA1KZ92 1463 aa8.6□□□□□ -1.03
TCF4-229ENST00000565580 RFC4P35249 363 aa8.6□□□□□ -1.03
TCF4-229ENST00000565580 IFFO2Q5TF58 517 aa8.6□□□□□ -1.03
TCF4-229ENST00000565580 INTS5Q6P9B9 1019 aaKnown RBP8.6□□□□□ -1.03
TCF4-229ENST00000565580 DNAJC10Q8IXB1 793 aa8.6□□□□□ -1.03
TCF4-229ENST00000565580 NLGN1Q8N2Q7 840 aa8.6□□□□□ -1.03
TCF4-229ENST00000565580 SRP68Q9UHB9 627 aaKnown RBP8.6□□□□□ -1.03
TCF4-229ENST00000565580 KIAA1551Q9HCM1 1747 aa8.6□□□□□ -1.03
TCF4-229ENST00000565580 KCPQ6ZWJ8 1503 aa8.59□□□□□ -1.03
TCF4-229ENST00000565580 VIRMAQ69YN4 1812 aaKnown RBP8.59□□□□□ -1.03
TCF4-229ENST00000565580 U2SURPO15042 1029 aaKnown RBP8.59□□□□□ -1.03
TCF4-229ENST00000565580 NBPF3Q9H094 633 aa8.59□□□□□ -1.03
TCF4-229ENST00000565580 C10orf71Q711Q0 1435 aa8.59□□□□□ -1.03
TCF4-229ENST00000565580 KIF13BQ9NQT8 1826 aa8.59□□□□□ -1.03
TCF4-229ENST00000565580 USP42Q9H9J4 1324 aaKnown RBP8.58□□□□□ -1.04
TCF4-229ENST00000565580 ATP10DQ9P241 1426 aa8.58□□□□□ -1.04
TCF4-229ENST00000565580 A0A0G2JLW4 131 aa8.58□□□□□ -1.04
TCF4-229ENST00000565580 EVI5O60447 810 aa8.58□□□□□ -1.04
TCF4-229ENST00000565580 CYP19A1P11511 503 aaPredicted RBP8.58□□□□□ -1.04
TCF4-229ENST00000565580 PTPN5P54829 565 aa8.58□□□□□ -1.04
TCF4-229ENST00000565580 C1QTNF8P60827 252 aa8.58□□□□□ -1.04
TCF4-229ENST00000565580 DDR1Q08345 913 aa8.58□□□□□ -1.04
TCF4-229ENST00000565580 MRPL50Q8N5N7 158 aaKnown RBP8.58□□□□□ -1.04
TCF4-229ENST00000565580 ZDHHC16Q969W1 377 aa8.58□□□□□ -1.04
TCF4-229ENST00000565580 CCDC87Q9NVE4 849 aa8.58□□□□□ -1.04
TCF4-229ENST00000565580 ADCY9O60503 1353 aa8.58□□□□□ -1.04
TCF4-229ENST00000565580 N4BP2Q86UW6 1770 aaPredicted RBP8.58□□□□□ -1.04
TCF4-229ENST00000565580 SOS1Q07889 1333 aaPredicted RBP8.57□□□□□ -1.04
TCF4-229ENST00000565580 BHMG1C9JSJ3 638 aaPredicted RBP8.57□□□□□ -1.04
TCF4-229ENST00000565580 DPEP1P16444 411 aa8.57□□□□□ -1.04
TCF4-229ENST00000565580 MAP3K9P80192 1104 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms